Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq8156 168 1e-36 seq1156 118 2e-21 seq15585 93.3 6e-14 seq2991 93.3 6e-14 >seq8156 Length=952 Score = 168 bits (186), Expect = 1e-36 Identities = 299/432 (69%), Gaps = 8/432 (2%) Strand=Plus/Minus Query 41687 CATCTGCCGGCCTTCGAGCTGACGGAAGAGGCGGTGAACTGCCACCACAACTATTGTGAG 41746 |||||||| ||| |||| || |||| |||||||||||||||||||||||| | | Sbjct 894 CATCTGCCCCGGTTCAAGCTCTCGAAAGAAGCGGTGAACTGCCACCACAACTATGTGGCG 835 Query 41747 CAGGAGAACCACTTCGGGCGCAACGTGTGGGTCACGCGCAAGGGTGCGGTTCGTGCACGT 41806 | ||||||||||||||| ||| |||||| | || || ||||| || || || || || Sbjct 834 CGGGAGAACCACTTCGGCGCCAATGTGTGGCTGACCCGGAAGGGGGCCGTGCGGGCCCGC 775 Query 41807 GAAGACGATCTGGGGATCATTCCGGGATCCATGGGTACGAAGTCGTACATCGTCAAGGGC 41866 | | || ||||| ||||||||||| || ||||| || ||| | |||||| |||| Sbjct 774 AAGGGTGACCTGGGCATCATTCCGGGCTCGATGGGCGCGCGGTCATTCATCGTGCGGGGC 715 Query 41867 AAGGGCAATCCGCATTCGTACTGCTCGTGCAGTCACGGGGCAGGACGCCGTATGTCGCGC 41926 |||||||| || || | | ||| ||| |||||||| || || ||||| || Sbjct 714 AAGGGCAACGACCAGTCCTTCCACTCCTGCTCCCACGGGGCCGGGCGGGTCATGTCCCGG 655 Query 41927 ACCGAGGCCGTCAAGCG---ATTCACCGTCGAAGACC-TCGTGCAGCAGACGCAGGGTGT 41982 |||||| |||||| || ||| | | |||| || || || ||| | || || Sbjct 654 GGCGAGGC---CAAGCGGACCTTTACCTTGGCCGACCACCGGGCCGC-GACCGAAGGCGT 599 Query 41983 TGAATGCCCGAAGACCAAGGAAGTGCTGGATGAAATCCCGGCCGCGTACAAGGACATCGA 42042 || |||| ||| |||||| || | ||||||| ||| || || ||||||||||| Sbjct 598 CGAGTGCCGCAAGGACAAGGACGTCATCGATGAAACGCCGATGGCCTATAAGGACATCGA 539 Query 42043 TCAGGTGATGCTTGACCAAAGCGATCTGGTGGAAGTCGTTCATACGCTGAAGGCCGTTCT 42102 ||| ||| | ||| ||| || || || || | || || ||||| || || Sbjct 538 CGCGGTCATGGCCGCCCAGGCCGAACTTGTCGATGTGGAGCACACCCTGAAACAGGTGCT 479 Query 42103 CAACGTGAAAGG 42114 | ||||||||| Sbjct 478 CTGCGTGAAAGG 467 >seq1156 Length=3943 Score = 118 bits (130), Expect = 2e-21 Identities = 278/408 (68%), Gaps = 15/408 (4%) Strand=Plus/Minus Query 41716 GGCGGTGAACTGCCACCACAACTATTGTG-AGCAGGAGAACCACTTCGGGCGCAACGTGT 41774 ||| ||||| |||||||||||||| |||| ||| ||| | ||||| ||| | | || | Sbjct 1456 GGCCGTGAATTGCCACCACAACTA-TGTGCAGCGTGAGCATCACTTTGGGGCCGAAGTCT 1398 Query 41775 GGGTCACGCGCAAGGGTGCGGTTCGTGCACGTGAAGACGATCTGGGGATCATTCCGGGAT 41834 || | || |||||||| || || ||| || || | || |||||||| ||||| || | Sbjct 1397 GGCTGACCCGCAAGGGGGCCGTCTCTGCGCGCGAGGGTGAGCTGGGGATTATTCCCGGGT 1338 Query 41835 CCATGGGTACGAAGTCGTACATCGTCAAGGGCAAGGGCAATCCGCATTCGTACTGCTCGT 41894 | ||||| | ||||| | |||||| ||||||||| | | | | |||||| | Sbjct 1337 CGATGGGGGCCAAGTCCTTCATCGTGCGCGGCAAGGGCCAGTCTGACAGCTTCTGCTCCT 1278 Query 41895 GCAGTCACGGGGCAGGACGCCGTATGTCGCGCACCGAGGCCGTCAAGCG---ATTCACCG 41951 || || ||||| || || | ||||| || || || || |||||| ||||| Sbjct 1277 GCTCCCATGGGGCGGGGCGAAG-ATGTCCCGGACTGAAGC---CAAGCGGACCTTCACGC 1222 Query 41952 TCGAAGACCTCGTGCAGCAGACGCAG--GGTGTTGAATGCC-CGAAGACCAAGGAAGTGC 42008 | | || | | ||| || | ||| || || ||||||| |||||||||| || Sbjct 1221 TTGGCGATCAC-CGCA-AAGCCACAGAAGGGGTCGAATGCCGTAAAGACCAAGG-CGTCA 1165 Query 42009 TGGATGAAATCCCGGCCGCGTACAAGGACATCGATCAGGTGATGCTTGACCAAAGCGATC 42068 | ||||| | || || || |||||||| ||||| || ||| | || | ||||| Sbjct 1164 TCGATGAGACGCCTGCGGCCTACAAGGATATCGACACCGTCATGGCGGCGCAGACCGATC 1105 Query 42069 TGGTGGAAGTCGTTCATACGCTGAAGGCCGTTCTCAACGTGAAAGGAT 42116 ||||||| || || || ||||| || ||| || ||||| |||| Sbjct 1104 TGGTGGAGGTGGTCCACACGCTCAAACAGGTTGTCTGTGTGAAGGGAT 1057 Score = 86.0 bits (94), Expect = 9e-12 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 40994 GCGTTGATGCCGGACGCGCACGCAGGCATCGGCAGCACGGTAGGATCGGTGATCGCTACG 41053 ||| | |||||||||| |||| ||| |||| || || || ||||| ||| | || Sbjct 2130 GCGGTAATGCCGGACGTGCACTGGGGCCGCGGCGCGACCGTGGGCTCGGTCATCCCGACA 2071 Query 41054 CAAGGTGCCATCATTCCGGCGGCGGTGGGCGTGGACATCGGCTGCGGCATGGTGGCGGTT 41113 || || ||||||||||| ||||| || ||||| |||||||| || ||| ||||| | Sbjct 2070 AGGGGCGCGATCATTCCGGCTGCGGTCGGGGTGGATATCGGCTGTGGGATGATGGCGATC 2011 Query 41114 CGTACCAGTCTCAAGGC 41130 || ||||| || | ||| Sbjct 2010 CGGACCAGCCTGACGGC 1994 >seq15585 Length=536 Score = 93.3 bits (102), Expect = 6e-14 Identities = 67/76 (88%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 186529 TGGTCCGAGTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACC 186588 ||||| ||| ||||||||||||||||||||||||||| |||||| |||||||||| ||| Sbjct 270 TGGTCGGAGCGAGAGGATTCGAACCTCCGACCCCCTGTACCCAAAACAGGTGCGCT-ACC 212 Query 186589 AGACTGCGCTACACTC 186604 || |||||| || ||| Sbjct 211 AGGCTGCGCCACGCTC 196 >seq2991 Length=1910 Score = 93.3 bits (102), Expect = 6e-14 Identities = 65/73 (89%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 186529 TGGTCCGAGTGAGAGGATTCGAACCTCCGACCCCCTGATCCCAAATCAGGTGCGCTAACC 186588 ||||| | |||||||||||||||||||||||||||| |||| || |||||||||| ||| Sbjct 15 TGGTCGGGCTGAGAGGATTCGAACCTCCGACCCCCTGCTCCCGAAGCAGGTGCGCT-ACC 73 Query 186589 AGACTGCGCTACA 186601 || |||||||||| Sbjct 74 AGGCTGCGCTACA 86 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739734685957800