Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq157 262 2e-65 seq163 159 2e-34 seq7919 147 1e-30 seq10837 140 2e-28 seq13113 123 1e-23 seq439 116 2e-21 >seq157 Length=15381 Score = 262 bits (290), Expect = 2e-65 Identities = 509/740 (69%), Gaps = 21/740 (3%) Strand=Plus/Plus Query 65970 GGCCGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCAC 66029 ||||| || | ||||||||||| |||||||| || || ||| | || | ||| | Sbjct 13753 GGCCGCGTCATCGAGATCTACGGCCCTGAGTCCTCTGGCAAGACCACCCTCGCGCTCACC 13812 Query 66030 GCGGTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCT 66089 ||| ||| ||| ||||||| || ||| |||||||| |||||||||||| || | Sbjct 13813 GCGCTGGGCAACTGCCAGAAGAAGGGCGGCGTCGCCGCCTTCATCGACGCCGAGCACGCC 13872 Query 66090 CTCGACCCTGAGTACGCCGCGGCG-CTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCA 66148 |||||||| | ||| ||||| ||||| || | ||||| | || | || || Sbjct 13873 CTCGACCCGTCCTGGGCC-CGGCGCCTCGGCGTCAACATCGACGACCTGCTCGTCAGCCA 13931 Query 66149 GCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGT 66208 ||| | | ||||| | ||||| |||||| || || |||||| || || || Sbjct 13932 GCCGAGCTCCGGCGAAGAAGCCCTTGAGATCTGCGAACTGCTCGTCCGCTCCAACGCCGT 13991 Query 66209 TTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGA 66268 | || |||| || ||||| || || || || ||||| || || || |||||||| || Sbjct 13992 GGACCTCGTCGTCGTCGACTCGGTCGCCGCTCTCGTGCCCCGCGCCGAACTCGAAGGCGA 14051 Query 66269 CATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCT 66328 || || || || || |||||||| || ||||| || ||||| |||||| |||||||||| Sbjct 14052 AATGGGCGATTCCCATGTCGGCCTTCAGGCCCGACTCATGTCGCAGGCCCTGCGCAAGCT 14111 Query 66329 GACCGGCACGATTGCC---AGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGA 66385 |||||| |||| ||| |||| | ||| ||| | | | |||||| | || || Sbjct 14112 CACCGGCGCGATCGCCAAGAGCAGCTGCACCGTCA---TCTTCATCAATCAGATCCGAGA 14168 Query 66386 GAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCG 66445 |||||||| |||| | |||| || || ||||||||||| || ||| ||| Sbjct 14169 AAAGATCGG---CGTGATGTTCGGCTCGCCCGAAACCACCACCGGCGGCCGGGCCCTGAA 14225 Query 66446 CTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGA 66505 |||||| | ||| | || || ||||| ||| | ||| | || |||||||||||||| Sbjct 14226 GTTCTACTCGTCGATCCGCATCGATGTGCGCCGCATCTCGTCCATCAAGGAAGGCGATGA 14285 Query 66506 GGCTGTCGGCAACCGC--ACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCG--C 66561 | |||||||||||| ||||| || || || |||||||| || || | ||| | Sbjct 14286 GAACGTCGGCAACCGCGTCCGCGCCCGA--GTCGTGAAGAACAAACTCGCCGCGCCGTTC 14343 Query 66562 ACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCCCGC-GAGGCTGAACTC 66620 | || || ||||| |||| | | | ||||||||| |||| | |||| || ||| Sbjct 14344 AAATCC--GCCGAGTTCGACATCATGTTCAACGAGGGCATCTCCCTCACAGGC-GACCTC 14400 Query 66621 CTCGACATGGCCGTTTCCCGAGGGCTCATCAAGAAGTCTGGGGCCTGGTTCAAGTACGGG 66680 ||||| | | ||| || ||| || || | ||||| || | ||||||| ||||| Sbjct 14401 GTCGACCTCGGCGTCACCGAAGGCATCGTCGACAAGTCCGGATCGTGGTTCAGTTACGGC 14460 Query 66681 GACAAGAACATCGGCCAGGG 66700 || | |||||||||| Sbjct 14461 GAGGTCCGCCTCGGCCAGGG 14480 >seq163 Length=14829 Score = 159 bits (176), Expect = 2e-34 Identities = 362/539 (67%), Gaps = 19/539 (4%) Strand=Plus/Minus Query 66075 GACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAAT 66134 ||||| |||||| | || || || | |||||| | || || || ||| | ||| | Sbjct 11338 GACGCGGAACATGCGCTTGATCCGCAATACGCCAAGAAACTGGGTGTCGATCTTGACGAG 11279 Query 66135 CTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTC 66194 || || | |||||| ||||||||||| || || || |||||||| || || ||| Sbjct 11278 CTTCTGATCTCGCAGCCCGACACTGGCGAACAAGCGCTCGAGATCGTGGATACGCTGGTC 11219 Query 66195 AAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCG 66254 ||||||| |||| | | ||||| | ||||| || || || || |||| | Sbjct 11218 CGATCTGGCGCGGTTAGCCTTGTCGTTATCGACTCGGTTGCTGCGCTCACGCCGAAATCC 11159 Query 66255 GAGCTCGAAGGGGACATCGGGGACTCGCA-CGTCGGCCTGCATGCCCGCCTGATGTCTCA 66313 ||||| || || ||||| || ||| ||| |||||| | ||||| ||||||||| || Sbjct 11158 GAGCTTGAGGGCGACATGGGCGAC-AGCAGTGTCGGCGTACATGCACGCCTGATGAGCCA 11100 Query 66314 GGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAA---CACGCTCACCCTGTGGGT 66370 || ||||| || || ||| || ||||| | | |||| || | | | | | | Sbjct 11099 AGCGATGCGGAAACTCACCAGCTCGATTTCGCGGTCCAACTGCATGGTGA---TCTTCAT 11043 Query 66371 GAATCAGCTGCGCGAGAAGATCGGCAACGTGGGCTACGG----CCCGAATGAGACCACCA 66426 || ||| | ||| |||||| || |||| | ||| |||||| || || | Sbjct 11042 CAACCAGATCCGCATGAAGATTGG---CGTGATGTTCGGCAGTCCCGAA----ACGACTA 10990 Query 66427 CCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCA 66486 ||||||| || ||||| |||||| |||||||||| |||| ||||| | |||| Sbjct 10989 CCGGTGGCAATGCTCTCAAATTCTACAGCTCGGTGCGTTTGGACATCCGCCGCATCGGTG 10930 Query 66487 CCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACA 66546 | ||||| |||| || | || |||||| ||| |||||||| || ||||| |||| Sbjct 10929 CAATCAAGGACCGCGACGAAGTGGTGGGCAACGCCACCCGCGTGAAAGTGGTCAAAAACA 10870 Query 66547 AGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCC 66605 || | || || ||| | |||| || || |||| | || ||||| ||||| ||| Sbjct 10869 AGGTTGCACCGCCGTTCAAGCAGGTGGAATTCGACATCATGTATGGCGAAGGCATCTCC 10811 >seq7919 Length=968 Score = 147 bits (162), Expect = 1e-30 Identities = 285/421 (68%), Gaps = 0/421 (0%) Strand=Plus/Minus Query 65913 ATTCCCACCGGCTCGATAGCTCTGGACGCCGCTCTCGGCATCGGGGGGTATCCGAGGGGC 65972 ||| ||||||| || | | |||||| || ||||| | ||||| || | |||| Sbjct 522 ATTTCCACCGGTTCACTCGGGCTGGACATTGCACTCGGTGTTGGGGGTCTCCCCAAGGGC 463 Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTTGTGCCTCCACGCG 66032 || | || || || || || || ||| || || ||| | ||| | || ||| || Sbjct 462 CGCATCGTTGAAATTTATGGCCCCGAGAGCTCTGGCAAGACGACGCTCGCGCTGCACACG 403 Query 66033 GTGGCCAATGCCCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAACATTCTCTC 66092 ||||| | ||||||||||| |||| ||||||| | ||||| || || | ||| Sbjct 402 GTGGCAGAGTGTCAGAAGGCCGGCGGCACAGCCGCCTTTGTTGACGCGGAGCACGCGCTC 343 Query 66093 GACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCA 66152 ||||| | || ||| | ||| || ||||| ||| | | ||| |||| ||||| Sbjct 342 GACCCGGTCTATGCCAAGAAGCTGGGTGTGGACGTCAGCGAACTCCTGGTGTCTCAGCCT 283 Query 66153 GACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCC 66212 ||| | || || ||||| ||||| |||| |||| || || ||||||| | | | Sbjct 282 GACGCCGGTGAACAGGCGCTGGAAATCGCTGACACGCTGGTGCGCTCTGGCGCGATCGAC 223 Query 66213 ATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATC 66272 | | || | ||||| ||||| |||||| ||||| || || |||||||| || || Sbjct 222 GTACTGGTGATCGACTCGGTGGCTGCCCTGACCCCGCGCGCTGAACTCGAAGGTGAGATG 163 Query 66273 GGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACC 66332 || ||||||| || ||||| || || |||||| ||||| |||| ||||||||| Sbjct 162 GGTGACTCGCTGCCGGGTCTGCAGGCTCGTCTGATGAGCCAGGCGCTGCGTAAGCTGACC 103 Query 66333 G 66333 | Sbjct 102 G 102 >seq10837 Length=771 Score = 140 bits (154), Expect = 2e-28 Identities = 344/519 (66%), Gaps = 17/519 (3%) Strand=Plus/Minus Query 66094 ACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTGTGCAGCCAG 66153 |||||| || ||| | ||| || || ||| |||| | || || | ||| |||| Sbjct 771 ACCCTGGTTATGCCCGGAAGCTGGGCGTCGATATCGATGAACTGTTGATCTCGCAACCAG 712 Query 66154 ACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCGAGGTTTCCA 66213 |||| ||||||||||| || ||||||| ||| || || || |||| || Sbjct 711 ACACAGGCGAGCAGGCGCTTGAGATCGCCGACACGCTGGTGCGCTCCGGCGCCGTCGAGG 652 Query 66214 TCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCG 66273 | | || || ||| |||||| |||||| |||||| || ||| | ||||| || || | Sbjct 651 TGCTGGTGGTCGACAGTGTGGCCGCCCTGACGCCGCGCGCCGAGTTGGAAGGCGAGATGG 592 Query 66274 GGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCG 66333 | ||| | || ||||||||||| || || ||||| ||||| |||||||||| |||| Sbjct 591 GTGACACCCATGTCGGCCTGCAGGCGCGGTTGATGAGCCAGGCGCTGCGCAAGCTCACCG 532 Query 66334 GCACGATTGCCAGCACCAA---CACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGA 66390 | |||| | | | || || | | | | | | |||||| | ||| ||||| Sbjct 531 GGTCGATCTCGCGGTCGAACTGCATGGTGA---TTTTCATCAATCAGATTCGCATGAAGA 475 Query 66391 TCGGCAACGTGGGCTACGG----CCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGC 66446 |||| ||| | ||| |||||| ||||| ||||| || || || ||| Sbjct 474 TCGG---TGTGATGTTCGGTAATCCCGAA----ACCACAACCGGCGGCAATGCGCTGAAA 422 Query 66447 TTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAG 66506 || ||| |||| ||||| | ||| | ||| |||||| ||||| | || ||| Sbjct 421 TTTTACTCCTCCGTGCGCCTCGATATTCGCCGGATCGGTCAAATCAAGGATAGTGACGAG 362 Query 66507 GCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCGCACCGC 66566 | || ||||||| || || || || |||||||||||| ||||||| ||| ||| Sbjct 361 GTCGTTGGCAACCAGACCCGTGTCCGCGTGGTCAAGAACAAGGTGGCGCCGCCGTTCCGG 302 Query 66567 CAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTCC 66605 | || || |||| | || ||||| ||||||||| Sbjct 301 ACTGTCGAATTCGACATCATGTATGGCGAAGGCATTTCC 263 >seq13113 Length=655 Score = 123 bits (136), Expect = 1e-23 Identities = 231/337 (69%), Gaps = 7/337 (2%) Strand=Plus/Minus Query 66225 GACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAGGGGACATCGGGGACTCGCAC 66284 || ||||||||||| ||| |||||| || || || ||||| || || || || || | Sbjct 572 GATTCTGTGGCGGCTCTGACGCCGCGTGCAGAACTTGAAGGTGAAATGGGCGATTCACTG 513 Query 66285 GTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCAAGCTGACCGGCACGATTGCC 66344 |||| |||| || || |||||| ||||| |||| |||||||| | | |||| | Sbjct 512 CCCGGCTTGCAGGCGCGTCTGATGAGCCAGGCATTGCGGAAGCTGACAGCCTCGATCTCG 453 Query 66345 AGCACCAACACGCTCACCCTGTGGGTGAATCAGCTGCGCGAGAAGATCGGCA--ACGTGG 66402 | |||| ||| | | | | || ||| | || ||||||||| | || Sbjct 452 AAATCCAATACGATGGTGATCTTCATCAACCAGATTCGGATGAAGATCGGTGTGATGTTT 393 Query 66403 GCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGC 66462 | || ||||| || ||||| || |||||||| || ||| || || ||||| |||| Sbjct 392 GGTA--GCCCG---GAAACCACAACAGGTGGTAACGCGCTGAAGTTTTATGCCTCTGTGC 338 Query 66463 GTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCA 66522 || | ||| | || | |||| || ||||| ||||||||| || ||||||| | Sbjct 337 GTCTTGATATTCGTCGCATCGGTGCCATCAAGGACCGCGATGAGGTGGTGGGCAACCAGA 278 Query 66523 CGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCC 66559 | || | ||||| |||||||||||||| ||||| || Sbjct 277 CCCGTATCAAGGTGGTCAAGAACAAGCTTGCGCCACC 241 >seq439 Length=8113 Score = 116 bits (128), Expect = 2e-21 Identities = 416/638 (65%), Gaps = 23/638 (4%) Strand=Plus/Plus Query 66073 TCGACGCCGAACATTCTCTCGACCCTGAGTACGCCGCGGCG-CTCGGGGTGGATGTCGAC 66131 ||||||| ||||| | || || || |||| || | ||| || || |||||| | || Sbjct 1754 TCGACGCGGAACACGCGCTTGATCCGCAGTATGC-GAAGCGTCTTGGCGTGGATCTGGAT 1812 Query 66132 AATCTCGTGGTTGTGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTC 66191 | || | || ||||| || || || || ||||| || || |||||||| | Sbjct 1813 GAGCTGCTAATTTCCCAGCCTGATACCGGTGAACAGGCTCTCGAAATCGTTGATACGTTA 1872 Query 66192 GTCAAGTCTGGCGAGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGG 66251 || || |||| ||| ||| | ||||| || || || ||||| || ||| Sbjct 1873 GTGCGTTCCGGCGCGGTCAGCATGGTTGTTGTCGATTCGGTTGCGGCTTTGACGCCCAAA 1932 Query 66252 GCGGAGCTCGAAGGGGACATCGGGGACTCGCAC-GTCGGCCTGCATGCCCGCCTGATGTC 66310 ||||||||||||| ||||| || ||| || | |||||| |||| |||||||||||| Sbjct 1933 TCGGAGCTCGAAGGCGACATGGGCGAC-AGCTCGGTCGGCGTGCACGCCCGCCTGATGAG 1991 Query 66311 TCAGGCCATGCGCAAGCTGACCGGCACGATTGCCAGCACCAAC---ACGCTCACCCTGTG 66367 || || ||||||||||||||||| | ||| | | || | || | | | | Sbjct 1992 CCAAGCTATGCGCAAGCTGACCGGTTCCATTAACCGTTCCGGCTGTACCGTTA---TTTT 2048 Query 66368 GGTGAATCAGCTGCGCGAGAAGATCGGC--AACG-TGGGCTACGGCCCGAATGAGACCAC 66424 | || || | || ||| |||||| || | | |||| ||||||| ||||| Sbjct 2049 CATTAACCAAATTCGGATGAAAATCGGCGTAATGTTTGGCT--CGCCCGAA----ACCAC 2102 Query 66425 CACCGGTGGTAAGGCTCTGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGC 66484 || |||||||| || || |||||| | ||||| || | ||| | || | |||| Sbjct 2103 GACGGGTGGTAACGCGCTCAAGTTCTACTCTTCGGTTCGGCTTGATATTCGTCGCATCGG 2162 Query 66485 CACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAA 66544 | | ||||| | || || || |||||| || || ||||| || ||||| || Sbjct 2163 CGCTCTCAAGGATCGTGACGAAATCGTGGGCAACGCGACCCGTGTGAAAGTCGTCAAAAA 2222 Query 66545 CAAGCTGGCGCCTCCGCACCGCCAGGCTGAGTTTTCCATCGTCTACGGCGAGGGCATTTC 66604 ||| | ||||| || | |||| || || |||| | ||||| || ||||| || Sbjct 2223 CAAAGTTGCGCCGCCCTTCAAACAGGTGGAATTCGACATCATGTACGGTGAAGGCATCTC 2282 Query 66605 CCGCGAGGCTGAACTCCTCGACATGGCCGTTTCCCG--AGGGCTCATCAAGAAGTCTGGG 66662 | || ||| || || ||| ||| || || | ||| | || | ||||| || Sbjct 2283 CAAAATGGGTGAGCTGCTTGACCTGG--GTGTCAAGGCAGGCGTGGTCGACAAGTCCGGT 2340 Query 66663 GCCTGGTTCAAGTACGGGGACAAGAACATCGGCCAGGG 66700 || ||||||| ||||| || || |||||||| || Sbjct 2341 GCGTGGTTCAGCTACGGTGATGAGCGGATCGGCCAAGG 2378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242421413174684