Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_012696.1 Length=73325 Score E Sequences producing significant alignments: (Bits) Value seq34 279 2e-70 seq388 233 9e-57 seq341 206 1e-48 seq13372 176 2e-39 >seq34 Length=41571 Score = 279 bits (308), Expect = 2e-70 Identities = 440/625 (70%), Gaps = 8/625 (1%) Strand=Plus/Plus Query 25124 GTGACTCTCTTCAACTGCTACGTCATGGGAACTATCCCTGACAGCCTTGATGGTATCTTT 25183 || || |||||||| || | ||||||||| | | ||||| | | | ||| || || Sbjct 33619 GTCACCCTCTTCAATTGTTTCGTCATGGGCGATGTACCTGATGACATGGGTGGGATTTTC 33678 Query 25184 GATATGCTCAAGGAAGCTGCACTCACCATGCAGCAAGGCGGTGGAATTGGTTATGACTTC 25243 || | |||||||| || |||||||||||||| |||||||| || || ||||||||| Sbjct 33679 GAGGCCTTGAAGGAAGCCGCCCTCACCATGCAGCAGGGCGGTGGCATCGGGTATGACTTC 33738 Query 25244 TCTACCCTTCGTCCCAAAGGTGCTCTTGTACGAGGCGTGGAGAGCTTCTCCAGCGGTCCT 25303 || ||||| || ||||||||||| ||| |||||| | | || | || ||| || Sbjct 33739 TCCACCCTGCGACCCAAAGGTGCCGAAGTAAAAGGCGTTGGG-GCAGATGCATCGGGCCC 33797 Query 25304 -CTCACCTTCATGGATGTCTGGGACTCCATGTGCAAAACTATCATGTCTGCTGGCTCACG 25362 || | ||| |||||||||||| || |||||||| | || ||||||||||| || ||| | Sbjct 33798 GCTGAGCTTTATGGATGTCTGGAACGCCATGTGCCAGACCATCATGTCTGCCGGATCAAG 33857 Query 25363 ACGTGGAGCTATGATGGCCACAATGCGTTGTGATCATCCTGACATCATGGACTTTGTTAC 25422 ||| || || ||||||||||| ||| || ||||| ||||| |||||| | Sbjct 33858 ACGCGGTGCCATGATGGCCACCATGGTGTGCACCCATCCAGACATTGAGGACTTCATCGA 33917 Query 25423 TGCCAAGCAAGATCCTCTGCGACTTCGGAACTTCAACGTGTCAGTTCTCTGTACCGATGA 25482 || || || || | ||| || | |||||| |||| || || || ||| Sbjct 33918 AGCAAAACAGGAAGCCGGGCGGCTGACCATGTTCAACCTGTCGGTACTGGTCACTGATCC 33977 Query 25483 GTTCATGGAAGCAGTTTCTGCTGACAGTGATTGGGATCTCGTATTTGATGGCAAGGTCTA 25542 || ||||| || || || || | |||||| ||||| || |||||||| ||| Sbjct 33978 TTTTATGGAGGCGGTCGAAGCAGATCGCGATTGGCCGCTCGTCTTCGATGGCAAAACCTA 34037 Query 25543 TCAGACCATCAAAGCCAAAGAACTCTGGGATGCCATTCTG-TGGAA--CACTTACAACTA 25599 | | || ||||||||| | ||| ||||| || || |||| ||| ||| ||| Sbjct 34038 TAAAACAATCAAAGCCCGGGCACTGTGGGA---CAAAATGATGGATGCCACCTACGCCTA 34094 Query 25600 CGCTGAACCCGGTGTAATCTTCATTGATCGCATCAACAAGGAAAACAACCTTTGGTTTCT 25659 || || ||||| || || ||||||||||||||||||||| ||||||| || | | Sbjct 34095 TGCGGAGCCCGGCGTCATTTTCATTGATCGCATCAACAAGCAAAACAATCTCGCCTATTG 34154 Query 25660 TGAAACCATTGCAGCAACGAATCCCTGTGGTGAGCAGCCTTTGCCTCCATATGGAGCTTG 25719 ||||| ||| || || ||||||||||| ||||| ||| | || || ||||| || || Sbjct 34155 CGAAACAATTCACGCCACCAATCCCTGTGGCGAGCAACCTCTCCCGCCCTATGGCGCCTG 34214 Query 25720 CCTTCTTGGTTCAGTCAATCTGGCA 25744 ||| | || ||| ||||||| ||| Sbjct 34215 TCTTTTAGGATCAATCAATCTTGCA 34239 >seq388 Length=8708 Score = 233 bits (258), Expect = 9e-57 Identities = 477/706 (68%), Gaps = 2/706 (0%) Strand=Plus/Minus Query 25039 GGAAGCTCGCTTCTACAATGCCCTGTATGATTTCAAGTTCCTACGTGCTGGTAGGATCAA 25098 ||||| ||| || ||| || || | |||||||| | ||| | || || | |||| Sbjct 2298 GGAAGATCGGTTTTACGGCGCGCTAGAGGATTTCAAATACCTGCCCGCCGGCCGCATCAC 2239 Query 25099 CTCCGGTGCAGGAACAGGCCGGAATGTGACTCTCTTCAACTGCTACGTCATGGGAACTAT 25158 | ||||| || || | || || || || |||||||||| || ||||| || || Sbjct 2238 AGCGGGTGCGGGGACGGCGCGTTCGGTAACGCTGTTCAACTGCTTTGTGATGGGCACAAT 2179 Query 25159 CCCTGACAGCCTTGATGGTATCTTTGATATGCTCAAGGAAGCTGCACTCACCATGCAGCA 25218 ||| |||||| | | ||| || || || ||||| || || ||||| || || |||||||| Sbjct 2178 CCCAGACAGCATGGGTGGCATTTTCGAAATGCTGAAAGAGGCTGCGCTGACAATGCAGCA 2119 Query 25219 AGGCGGTGGAATTGGTTATGACTTCTCTACCCTTCGTCCCAAAGGTGCTCTTGTACGAGG 25278 ||||| || || || ||||| ||| || | || ||||| || || || ||| Sbjct 2118 GGGCGGCGGGATCGGCTATGATTTCAGCACGATCCGGCCCAAGGGGGCAGGGGTCAAAGG 2059 Query 25279 CGTGGAGAGCTTCTCCAGCGGT-CCTCTCACCTTCATGGATGTCTGGGACTCCATGTGCA 25337 |||| | || | | ||| || | ||||||||||||| |||||| | |||||| Sbjct 2058 TGTGGCG-GCGGATGCCTCGGGGCCATTGTCCTTCATGGATGTGTGGGACGCGATGTGCC 2000 Query 25338 AAACTATCATGTCTGCTGGCTCACGACGTGGAGCTATGATGGCCACAATGCGTTGTGATC 25397 || |||||||| || || || || || || || |||||||| || ||||| || |||| Sbjct 1999 GCACCATCATGTCGGCAGGGTCGCGGCGCGGTGCGATGATGGCGACGATGCGCTGCGATC 1940 Query 25398 ATCCTGACATCATGGACTTTGTTACTGCCAAGCAAGATCCTCTGCGACTTCGGAACTTCA 25457 | || || ||| ||| || | |||||| ||| | || || || | |||| Sbjct 1939 ACCCGGATATCGAGGATTTCATCGGGGCCAAGGCGGATGCGGCACGGCTGCGCATGTTCA 1880 Query 25458 ACGTGTCAGTTCTCTGTACCGATGAGTTCATGGAAGCAGTTTCTGCTGACAGTGATTGGG 25517 || |||| || ||| || ||||| || |||||||| || | ||| | |||| Sbjct 1879 ACCTGTCGGTGCTCGTCACGGATGACTTTATGGAAGCGGTCAAGACGGACGGGTCATGGG 1820 Query 25518 ATCTCGTATTTGATGGCAAGGTCTATCAGACCATCAAAGCCAAAGAACTCTGGGATGCCA 25577 || | || ||||| ||||||||||| | || | | || || || ||| | | Sbjct 1819 ATTTGGTCTTTGACGGCAAGGTCTACCGCACTGTGCAGGCACGCGATCTGTGGAACCGCG 1760 Query 25578 TTCTGTGGAACACTTACAACTACGCTGAACCCGGTGTAATCTTCATTGATCGCATCAACA 25637 | || | || || | || || |||||||| || ||||| || || || ||||| Sbjct 1759 TCATGCGCGCGACCTATGATTATGCCGAACCCGGCGTGATCTTTATCGACCGGATCAATC 1700 Query 25638 AGGAAAACAACCTTTGGTTTCTTGAAACCATTGCAGCAACGAATCCCTGTGGTGAGCAGC 25697 ||| |||||||| | | | | || ||||| || || || || ||||||||||| || | Sbjct 1699 AGGCCAACAACCTGAGCTATGTCGAGACCATCGCGGCGACAAACCCCTGTGGTGAACAAC 1640 Query 25698 CTTTGCCTCCATATGGAGCTTGCCTTCTTGGTTCAGTCAATCTGGC 25743 | |||| || ||||| || ||||| || || || |||| |||| Sbjct 1639 CCCTGCCGCCCTATGGTGCCTGCCTGCTGGGGTCGATCAACATGGC 1594 Score = 98.7 bits (108), Expect = 5e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 26435 ATGCAGGCTGTGATTCAGAAATGGGTGGACTCATCTATTTCTAAGACTGTGAATCTTCCT 26494 |||||||||| | ||||||||||||||||| || || || ||||| | || || Sbjct 938 ATGCAGGCTGCGGCGCAGAAATGGGTGGACTCTTCGATCTCAAAGACGATCAACTGCCCC 879 Query 26495 GAAGACATCAGCTTTGATGACTTCAAAGCAGTCTATGATCACGCCTACACAACTGGCTGT 26554 ||||||||||| || || | ||||| | ||||| | || | | || |||||| Sbjct 878 GAAGACATCAGTTTCGAGGCGTTCAAGGACGTCTACATGGAGGCGTTCGAGACCGGCTGT 819 Query 26555 AAAGGTTGCACAACCTATCGGCCAAATGACGTGACAGGCTCTGT 26598 ||||| ||||| |||||||| || || || ||||| || ||||| Sbjct 818 AAAGGCTGCACGACCTATCGTCCGAACGATGTGACCGGGTCTGT 775 >seq341 Length=9621 Score = 206 bits (228), Expect = 1e-48 Identities = 485/725 (67%), Gaps = 8/725 (1%) Strand=Plus/Minus Query 25023 CAGAGCGTGATGCTTTGGAAGCTCGCTTCTACAATGCCCTGTATGATTTCAAGTTCCTAC 25082 |||||| || | || |||| |||| ||||| || || | |||||||||| | | Sbjct 7397 CAGAGCCGGAGGTTTGGGAACCTCGGTTCTATGCCGCTTTGGAGGATTTCAAGTATTTGC 7338 Query 25083 GTGCTGGTAGGATCAACTCCGGTGCAGGAACAGGCCGGAATGTGACTCTCTTCAACTGCT 25142 || || | || | | || ||||| || | ||| ||||| | ||||| || | Sbjct 7337 CCGCGGGCCGCATTACGGCGGGGGCAGGGACTGCGCGGTCGGTGACGTTGTTCAATTGTT 7278 Query 25143 ACGTCATGGGAACTATCCCTGACAGCCTTGATGGTATCTTTGATATGCTCAAGGAAGCTG 25202 ||||||||| || |||| |||||| | | || || || || ||||| ||||| || | Sbjct 7277 TCGTCATGGGCACGGTCCCCGACAGCATGGGCGGAATTTTCGACATGCTGAAGGAGGCCG 7218 Query 25203 CACTCACCATGCAGCAAGGCGGTGGAATTGGTTATGACTTCTCTACCCTTCGTCCCAAAG 25262 | || || |||||||| || ||||| || || || || || || ||| | || ||||| | Sbjct 7217 CGCTGACGATGCAGCAGGGTGGTGGGATCGGCTACGATTTTTCGACCATCCGGCCCAAGG 7158 Query 25263 GTGCTCTTGT-ACGAGGCGTGGAGAGCTTCT-CCAGCGGTCCTCTCACCTTCATGGATGT 25320 | || || ||| || |||| | || | |||| || ||| | | || |||||||| Sbjct 7157 GCGCGAGCGTGACG-GGTGTGGCG-GCGGATGCCAGTGGGCCTTTGTCGTTTATGGATGT 7100 Query 25321 CTGGGACTCCATGTGCAAAACTATCATGTCTGCTGGCTCACGACGTGGAGCTATGATGGC 25380 ||||| || |||||| ||||| ||||| || || || || || || || |||||||| Sbjct 7099 GTGGGATTCGATGTGCCGCACTATTATGTCGGCGGGGTCCCGGCGGGGGGCGATGATGGC 7040 Query 25381 CACAATGCGTTGTGATCATCCTGACATCATGGACTTTGTTACTGCCAAGCAAGATCCTCT 25440 ||| ||||| || || || || ||||| || |||||| | |||||| || || Sbjct 7039 CACGATGCGGTGCGACCACCCCGACATTATTGACTTTATCGAAGCCAAGTCGGACCCGGC 6980 Query 25441 GCGACTTCGGAACTTCAACGTGTCAGTTCTCTGTACCGATGAGTTCATGGAAGCAGTTTC 25500 ||| || || | |||||||| || | || || | || ||||| || || Sbjct 6979 GCGGCTGCGCATGTTCAACGTAAGCGTGTTGGTCACGGACGCCTTTATGGAGGCGGTGAA 6920 Query 25501 TGCTGACAGTGATTGGGATCTCGTATTTGATGGCAAGGTCTATCAGACCATCAAAGCCAA 25560 || || | |||||| | || ||||| || ||| || | || | | || Sbjct 6919 GGCCGATGCTCCGTGGGATTTGGTGTTTGACGGGCGGGTGTACCGCACGTTGGATGCGCG 6860 Query 25561 AGAACTCTGGGATGCCATTCTGTGGAACACTTACAACTACGCTGAACCCGGTGTAATCTT 25620 || || ||| | ||| || | || | | | ||||| || || || || || || Sbjct 6859 TGATCTGTGGAACCGGATTATGCAGGCGACGTTCGAATACGCCGAGCCGGGGGTGATTTT 6800 Query 25621 CATTGATCGCATCAACAAGGAAAACAACCTTTGGTTTCTT--GAAACCATTGCAGCAACG 25678 ||| || || |||||| || ||||||| || || || || || ||||| |||||| Sbjct 6799 CATCGACCGGATCAACGCGGCCAACAACC--TGAATTATTGCGAGACGATTGCGGCAACG 6742 Query 25679 AATCCCTGTGGTGAGCAGCCTTTGCCTCCATATGGAGCTTGCCTTCTTGGTTCAGTCAAT 25738 || || ||||| ||||| || ||||| || ||||| || || | || ||||| || ||| Sbjct 6741 AACCCTTGTGGGGAGCAACCCTTGCCGCCCTATGGGGCCTGTTTGCTGGGTTCGGTGAAT 6682 Query 25739 CTGGC 25743 |||| Sbjct 6681 ATGGC 6677 >seq13372 Length=642 Score = 176 bits (194), Expect = 2e-39 Identities = 337/493 (68%), Gaps = 3/493 (1%) Strand=Plus/Plus Query 25058 GCCCTGTATGATTTCAAGTTCCTA-CGTGCTGGTAGGATCAACTCCGGTGCAGGAACAGG 25116 ||||| | |||||||| | ||| | ||||| |||||| | || || || |||| Sbjct 129 GCCCTTGAGGATTTCAAATACCTGTCCAGCTGGCCGGATCACGGCAGGCGCGGGTACAGC 188 Query 25117 CCGGAATGTGACTCTCTTCAACTGCTACGTCATGGGAACTATCCCTGACAGCCTTGATGG 25176 ||| ||| || | ||||| |||| |||||||| ||| | || |||||| | | || Sbjct 189 GCGGTCTGTTACATTATTCAATTGCTTTGTCATGGGCACTGTGCCCGACAGCATGGGGGG 248 Query 25177 TATCTTTGATATGCTCAAGGAAGCTGCACTCACCATGCAGCAAGGCGGTGGAATTGGTTA 25236 || ||||| |||||||| || || || | || |||||||| ||||| || ||||| || Sbjct 249 CATTTTTGAAATGCTCAAAGAGGCCGCGTTGACGATGCAGCAGGGCGGCGGCATTGGGTA 308 Query 25237 TGACTTCTCTACCCTTCGTCCCAAAGGTGCTCTTGTACGAGGCGTGGAGAGCTTCTCCAG 25296 ||| || || ||| |||| |||||||| || || | || || | | || | || Sbjct 309 TGATTTTTCCACCATTCGCCCCAAAGGCGCGGACGTGCATGGTGTCGCG-GCGGATGCAT 367 Query 25297 C-GGTCCTCTCACCTTCATGGATGTCTGGGACTCCATGTGCAAAACTATCATGTCTGCTG 25355 | || || | | ||||||||||| |||||| | ||||| || || |||||||| | Sbjct 368 CTGGCCCGTTGTCTTTCATGGATGTATGGGACGCGATGTGTCGCACGATTATGTCTGCCG 427 Query 25356 GCTCACGACGTGGAGCTATGATGGCCACAATGCGTTGTGATCATCCTGACATCATGGACT 25415 | || || || || || |||||||| || ||||| || ||||| || || | ||| | Sbjct 428 GGTCGCGCCGCGGTGCGATGATGGCGACCATGCGGTGCGATCACCCAGATGTTGAGGATT 487 Query 25416 TTGTTACTGCCAAGCAAGATCCTCTGCGACTTCGGAACTTCAACGTGTCAGTTCTCTGTA 25475 | | | ||||| || ||| ||| | |||| ||||| |||| || | || Sbjct 488 TCATCGCGGCCAAATCTGACCCTGCGCGGTTGCGGATGTTCAATATGTCCGTGTTGATTA 547 Query 25476 CCGATGAGTTCATGGAAGCAGTTTCTGCTGACAGTGATTGGGATCTCGTATTTGATGGCA 25535 ||||| |||||| |||| || | ||| | | |||||||| || || || |||| Sbjct 548 CCGATCCTTTCATGAAAGCGGTAAAGTCGGACGGGGTATGGGATCTGGTTTTCGACGGCA 607 Query 25536 AGGTCTATCAGAC 25548 | || || | ||| Sbjct 608 AAGTATACCGGAC 620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234467820381142