Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_012697.1 Length=74611 Score E Sequences producing significant alignments: (Bits) Value seq34 289 1e-73 seq341 248 4e-61 seq13372 159 2e-34 seq388 102 4e-17 >seq34 Length=41571 Score = 289 bits (320), Expect = 1e-73 Identities = 455/647 (70%), Gaps = 6/647 (1%) Strand=Plus/Plus Query 26495 CCGGTGCTGGAACAGGCCGGAACGTGACTCTCTTCAACTGCTACGTCATGGGTACTATCC 26554 |||| ||||| || | || || || |||||||| || | ||||||||| | | | Sbjct 33596 CCGGGGCTGGCACCGAACGCTCAGTCACCCTCTTCAATTGTTTCGTCATGGGCGATGTAC 33655 Query 26555 CTGACAGCCTTGATGGTATCTTCGATATGCTCAAGGAAGCTGCACTTACCATGCAGCAAG 26614 |||| | | | ||| || ||||| | |||||||| || || ||||||||||| | Sbjct 33656 CTGATGACATGGGTGGGATTTTCGAGGCCTTGAAGGAAGCCGCCCTCACCATGCAGCAGG 33715 Query 26615 GTGGTGGAATCGGTTACGACTTCTCTACCCTTCGTCCCAAAGGTGCTCTTGTAAAGGGAG 26674 | ||||| ||||| || |||||||| ||||| || ||||||||||| ||||| || | Sbjct 33716 GCGGTGGCATCGGGTATGACTTCTCCACCCTGCGACCCAAAGGTGCCGAAGTAAAAGGCG 33775 Query 26675 TGGAGAGCTTCTCCAGCGGTCCT-CTCACCTTTATGGATGTCTGGGACTCCATGTGCAAA 26733 | | | || | || ||| || || | |||||||||||||||| || |||||||| | Sbjct 33776 TTGGG-GCAGATGCATCGGGCCCGCTGAGCTTTATGGATGTCTGGAACGCCATGTGCCAG 33834 Query 26734 ACCATTATGTCTGCTGGCTCCCGTCGTGGAGCTATGATGGCCACCATGCGGTGTGATCAT 26793 ||||| |||||||| || || | || || || ||||||||||||||| ||| ||| Sbjct 33835 ACCATCATGTCTGCCGGATCAAGACGCGGTGCCATGATGGCCACCATGGTGTGCACCCAT 33894 Query 26794 CCTGACATCATGGAGTTTGTCACAGCCAAACAGGATCCTCTGCGACTCCGTAACTTCAAC 26853 || ||||| ||| || || ||| |||||||| | ||| || | |||||| Sbjct 33895 CCAGACATTGAGGACTTCATCGAAGCAAAACAGGAAGCCGGGCGGCTGACCATGTTCAAC 33954 Query 26854 GTCTCAGTTCTCTGTACGGATGAGTTCATGGAAGCAGTGGCTGCTGACAGTGATTGGGAT 26913 | || || || || ||| || ||||| || || | || || | |||||| Sbjct 33955 CTGTCGGTACTGGTCACTGATCCTTTTATGGAGGCGGTCGAAGCAGATCGCGATTGGCCG 34014 Query 26914 CTCATGTTCGATGGTAAGGTCTACCAGACCATCAAAGCCAAAGAACTCTGGGAAACCATT 26973 ||| | |||||||| || ||| | || ||||||||| | ||| ||||| | || Sbjct 34015 CTCGTCTTCGATGGCAAAACCTATAAAACAATCAAAGCCCGGGCACTGTGGGACAAAAT- 34073 Query 26974 CTCTGGA--ACACCTACAACTACGCTGAACCCGGTGTGATCTTCATTGATCGCATCAACA 27031 |||| ||||||| ||| || || ||||| || || ||||||||||||||||||| Sbjct 34074 -GATGGATGCCACCTACGCCTATGCGGAGCCCGGCGTCATTTTCATTGATCGCATCAACA 34132 Query 27032 AGGAAAACAATCTTTGGTTCCTTGAAACCATTGCAGCAACAAATCCATGTGGTGAGCAAC 27091 || |||||||||| | ||||| ||| || || ||||| ||||| ||||||| Sbjct 34133 AGCAAAACAATCTCGCCTATTGCGAAACAATTCACGCCACCAATCCCTGTGGCGAGCAAC 34192 Query 27092 CGCTCCCTCCATATGGTGCATGTCTGCTCGGATCGGTGAATCTGGCA 27138 | ||||| || ||||| || ||||| | ||||| | ||||| ||| Sbjct 34193 CTCTCCCGCCCTATGGCGCCTGTCTTTTAGGATCAATCAATCTTGCA 34239 Score = 86.0 bits (94), Expect = 3e-12 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 28183 CCTTTCGAGATCTTTATCAACTCCAAGAACGTGGAACACCATCAGTGGACTGCGGCTCTT 28242 ||||| |||||||| |||||||| || ||| |||| ||| || ||||| | ||| | Sbjct 35296 CCTTTTGAGATCTTCATCAACTCAAAAAACATGGAGCACTATGCCTGGACCGTGGCCTTG 35355 Query 28243 ACGAGGATGATCTCGGCAGTCTTCCAACGAGGTGGAGATGTCCGATTCGTTGCTGAAGAA 28302 ||| ||||||||||||| ||||||| || || || ||||| || || | ||| || Sbjct 35356 ACGCGGATGATCTCGGCCGTCTTCCGCCGCGGCGGCGATGTGACCTTTGTCGTTGAGGAG 35415 Query 28303 CTGAA 28307 ||||| Sbjct 35416 CTGAA 35420 >seq341 Length=9621 Score = 248 bits (274), Expect = 4e-61 Identities = 482/705 (68%), Gaps = 10/705 (1%) Strand=Plus/Minus Query 26438 CTCGCTTCTACAATGCTCTGTATGATTTCAAGTTCCTACCTGCTGGTAGGATCAACTCCG 26497 |||| ||||| ||| || | |||||||||| | || || || | || | | | Sbjct 7376 CTCGGTTCTATGCCGCTTTGGAGGATTTCAAGTATTTGCCCGCGGGCCGCATTACGGCGG 7317 Query 26498 GTGCTGGAACAGGCCGGAACGTGACTCTCTTCAACTGCTACGTCATGGGTACTATCCCTG 26557 | || || || | ||| ||||| | ||||| || | ||||||||| || |||| | Sbjct 7316 GGGCAGGGACTGCGCGGTCGGTGACGTTGTTCAATTGTTTCGTCATGGGCACGGTCCCCG 7257 Query 26558 ACAGCCTTGATGGTATCTTCGATATGCTCAAGGAAGCTGCACTTACCATGCAGCAAGGTG 26617 ||||| | | || || ||||| ||||| ||||| || || || || |||||||| |||| Sbjct 7256 ACAGCATGGGCGGAATTTTCGACATGCTGAAGGAGGCCGCGCTGACGATGCAGCAGGGTG 7197 Query 26618 GTGGAATCGGTTACGACTTCTCTACCCTTCGTCCCAAAGGTGCTCTTGTAAAGGGAGTGG 26677 |||| ||||| ||||| || || ||| | || ||||| || || || | ||| |||| Sbjct 7196 GTGGGATCGGCTACGATTTTTCGACCATCCGGCCCAAGGGCGCGAGCGTGACGGGTGTGG 7137 Query 26678 AGAGCTTCT-CCAGCGGTCCTCTCACCTTTATGGATGTCTGGGACTCCATGTGCAAAACC 26736 | || | |||| || ||| | | ||||||||||| ||||| || |||||| || Sbjct 7136 CG-GCGGATGCCAGTGGGCCTTTGTCGTTTATGGATGTGTGGGATTCGATGTGCCGCACT 7078 Query 26737 ATTATGTCTGCTGGCTCCCGTCGTGGAGCTATGATGGCCACCATGCGGTGTGATCATCCT 26796 |||||||| || || ||||| || || || ||||||||||| |||||||| || || || Sbjct 7077 ATTATGTCGGCGGGGTCCCGGCGGGGGGCGATGATGGCCACGATGCGGTGCGACCACCCC 7018 Query 26797 GACATCATGGAGTTTGTCACAGCCAAACAGGATCCTCTGCGACTCCGTAACTTCAACGTC 26856 ||||| || || ||| || |||||| ||| || ||| || || | |||||||| Sbjct 7017 GACATTATTGACTTTATCGAAGCCAAGTCGGACCCGGCGCGGCTGCGCATGTTCAACGTA 6958 Query 26857 TCAGTTCTCTGTACGGATGAGTTCATGGAAGCAGTGGCTGCTGACAGTGATTGGGATCTC 26916 || | ||||| | || ||||| || ||| || || | |||||| | Sbjct 6957 AGCGTGTTGGTCACGGACGCCTTTATGGAGGCGGTGAAGGCCGATGCTCCGTGGGATTTG 6898 Query 26917 ATGTTCGATGGTAAGGTCTACCAGACCATCAAAGCCAAAGAACTCTGGGAAACC--ATTC 26974 |||| || || ||| |||| || | | || || |||| | |||| ||| Sbjct 6897 GTGTTTGACGGGCGGGTGTACCGCACGTTGGATGCGCGTGA--TCTGTGGAACCGGATTA 6840 Query 26975 TCTGGAACACCTACAACTACGCTGAACCCGGTGTGATCTTCATTGATCGCATCAACAAGG 27034 | | || | | | ||||| || || || ||||| ||||| || || |||||| || Sbjct 6839 TGCAGGCGACGTTCGAATACGCCGAGCCGGGGGTGATTTTCATCGACCGGATCAACGCGG 6780 Query 27035 AAAACAATCT--TTGGTTCCTTGAAACCATTGCAGCAACAAATCCATGTGGTGAGCAACC 27092 ||||| || | || | || || ||||| ||||| || || ||||| |||||||| Sbjct 6779 CCAACAACCTGAATTATTGC--GAGACGATTGCGGCAACGAACCCTTGTGGGGAGCAACC 6722 Query 27093 GCTCCCTCCATATGGTGCATGTCTGCTCGGATCGGTGAATCTGGC 27137 | || || ||||| || ||| |||| || ||||||||| |||| Sbjct 6721 CTTGCCGCCCTATGGGGCCTGTTTGCTGGGTTCGGTGAATATGGC 6677 >seq13372 Length=642 Score = 159 bits (176), Expect = 2e-34 Identities = 328/484 (68%), Gaps = 3/484 (1%) Strand=Plus/Plus Query 26461 GATTTCAAGTTCCTA-CCTGCTGGTAGGATCAACTCCGGTGCTGGAACAGGCCGGAACGT 26519 |||||||| | ||| || ||||| |||||| | || || || |||| ||| || Sbjct 138 GATTTCAAATACCTGTCCAGCTGGCCGGATCACGGCAGGCGCGGGTACAGCGCGGTCTGT 197 Query 26520 GACTCTCTTCAACTGCTACGTCATGGGTACTATCCCTGACAGCCTTGATGGTATCTTCGA 26579 || | ||||| |||| |||||||| ||| | || |||||| | | || || || || Sbjct 198 TACATTATTCAATTGCTTTGTCATGGGCACTGTGCCCGACAGCATGGGGGGCATTTTTGA 257 Query 26580 TATGCTCAAGGAAGCTGCACTTACCATGCAGCAAGGTGGTGGAATCGGTTACGACTTCTC 26639 |||||||| || || || | || |||||||| || || || || || || || || || Sbjct 258 AATGCTCAAAGAGGCCGCGTTGACGATGCAGCAGGGCGGCGGCATTGGGTATGATTTTTC 317 Query 26640 TACCCTTCGTCCCAAAGGTGCTCTTGTAAAGGGAGTGGAGAGCTTCTCCAGCGGTCCTCT 26699 ||| |||| |||||||| || || | || || | | || | || | | || | Sbjct 318 CACCATTCGCCCCAAAGGCGCGGACGTGCATGGTGTCGCG-GCGGATGCATCTGGCCCGT 376 Query 26700 CACCTTT-ATGGATGTCTGGGACTCCATGTGCAAAACCATTATGTCTGCTGGCTCCCGTC 26758 |||| |||||||| |||||| | ||||| || ||||||||||| || || || | Sbjct 377 TGTCTTTCATGGATGTATGGGACGCGATGTGTCGCACGATTATGTCTGCCGGGTCGCGCC 436 Query 26759 GTGGAGCTATGATGGCCACCATGCGGTGTGATCATCCTGACATCATGGAGTTTGTCACAG 26818 | || || |||||||| ||||||||||| ||||| || || | ||| || || | | Sbjct 437 GCGGTGCGATGATGGCGACCATGCGGTGCGATCACCCAGATGTTGAGGATTTCATCGCGG 496 Query 26819 CCAAACAGGATCCTCTGCGACTCCGTAACTTCAACGTCTCAGTTCTCTGTACGGATGAGT 26878 ||||| || ||| ||| | || | ||||| | || || | ||| ||| | Sbjct 497 CCAAATCTGACCCTGCGCGGTTGCGGATGTTCAATATGTCCGTGTTGATTACCGATCCTT 556 Query 26879 TCATGGAAGCAGTGGCTGCTGACAGTGATTGGGATCTCATGTTCGATGGTAAGGTCTACC 26938 ||||| |||| || | ||| | | |||||||| | ||||| || || || |||| Sbjct 557 TCATGAAAGCGGTAAAGTCGGACGGGGTATGGGATCTGGTTTTCGACGGCAAAGTATACC 616 Query 26939 AGAC 26942 ||| Sbjct 617 GGAC 620 >seq388 Length=8708 Score = 102 bits (112), Expect = 4e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 27829 ATGCAGGCTGTGCTTCAGAAATGGGTAGACTCATCCATTTCTAAGACTGTCAATCTTCCT 27888 |||||||||| | ||||||||||| ||||| || || || ||||| |||| || Sbjct 938 ATGCAGGCTGCGGCGCAGAAATGGGTGGACTCTTCGATCTCAAAGACGATCAACTGCCCC 879 Query 27889 GAAGACATCAGCTTTGATGACTTCAAAGCAGTCTATGATCACGCCTACACTACTGGCTGT 27948 ||||||||||| || || | ||||| | ||||| | || | | || |||||| Sbjct 878 GAAGACATCAGTTTCGAGGCGTTCAAGGACGTCTACATGGAGGCGTTCGAGACCGGCTGT 819 Query 27949 AAAGGTTGCACAACCTATCGGCCAAACGACGTGACAGGTTCTGT 27992 ||||| ||||| |||||||| || ||||| ||||| || ||||| Sbjct 818 AAAGGCTGCACGACCTATCGTCCGAACGATGTGACCGGGTCTGT 775 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 238582188978284