Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq7974 174 4e-39 seq7298 104 6e-18 seq479 89.7 1e-13 seq3550 82.4 2e-11 >seq7974 Length=968 Score = 174 bits (192), Expect = 4e-39 Identities = 216/296 (73%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 8827 GAAATGCGGGCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAA 8886 |||| || || |||||| || | ||||| || ||| |||| ||| || || || ||| Sbjct 69 GAAAATCGTGCTACCGAGATCTCTGAAATTTCACGCTCACTGAAAGCGATGGCCAAAGAA 128 Query 8887 CTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAAC 8946 | ||| ||| | || || ||||||||| | |||||| | || ||| | || | | Sbjct 129 TTGAGCGTCCCGGTTATTGCTCTGTCGCAGTTAAATCGAAGCCTGGAGCAGCGTACCGAT 188 Query 8947 AAGCGGCCCGTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTG 9006 || || || || ||||| ||| || | ||||| || ||||| ||||||||||| || || Sbjct 189 AAACGCCCGGTTATGTCGGATTTGAGAGAGTCCGGCGCGATTGAGCAGGATGCGGATGTC 248 Query 9007 ATCCTCTTTATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCC 9066 ||||| |||||||| || |||||||||||| || || ||||| ||| |||| || Sbjct 249 ATCCTGTTTATCTATCGGGATGAGGTCTATGACGAAGAGAGCGCCGATAAGGGTATTGCT 308 Query 9067 GAAATCATCATTGCGAAGCAGCGAAACGGGCCGATTGGCACCGTACGGCTCGCATT 9122 || || || |||| |||||||| ||||| |||||||||| || || || || || Sbjct 309 GAGATTATTATTGGTAAGCAGCGTAACGGCCCGATTGGCAAAGTGCGTCTGGCGTT 364 >seq7298 Length=1026 Score = 104 bits (114), Expect = 6e-18 Identities = 223/331 (67%), Gaps = 3/331 (1%) Strand=Plus/Plus Query 8776 ATGATTGTCGTTGACTACCTGCAGCTGATGTCGGGTGACGGCGGCGGATCTGAAATGCGG 8835 |||||| | || || || ||||||||||| | | || ||| | | ||||| || Sbjct 259 ATGATTATGGTCGATTATTTGCAGCTGATGACAG-TGCCGG--GTTTAAGTGAAAACCGC 315 Query 8836 GCCACCGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTT 8895 || || | || ||||| || || || | ||| | ||||| ||||| | || Sbjct 316 ACCTTAGAAATTGCTGAAATTTCCCGTTCATTAAAATCCTTAGCGAAAGAACTGAAAGTG 375 Query 8896 CCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCC 8955 ||| | || || ||||| ||||| || || || || || | ||| | | || || || Sbjct 376 CCGGTGATAGCCCTGTCTCAGCTGAACCGTGGCCTGGAACAGCGCGCTGATAAACGTCCG 435 Query 8956 GTCATGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTT 9015 || | || || |||| |||||||| | ||||||||||| |||||| | || | ||| Sbjct 436 GTTAACTCTGACTTGCGGGAGTCGGGCTCAATCGAGCAGGACGCCGACTTAATTATGTTT 495 Query 9016 ATCTACCGCGATGAGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATC 9075 |||||||| || ||||| || | ||||| || || || ||| || || ||| Sbjct 496 ATCTACCGGGACGAGGTTTACCATGAGGACAGTGCTGAGAAAGGCCTGGCTGAGATTATC 555 Query 9076 ATTGCGAAGCAGCGAAACGGGCCGATTGGCA 9106 |||| || |||||||| || || || |||| Sbjct 556 ATTGGTAAACAGCGAAATGGCCCCATCGGCA 586 >seq479 Length=7726 Score = 89.7 bits (98), Expect = 1e-13 Identities = 121/166 (73%), Gaps = 2/166 (1%) Strand=Plus/Plus Query 8841 CGAGGTCGCCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGAT 8900 |||| || |||| || || | | ||||| || || |||||||||||| | || | Sbjct 1803 CGAGATCTCCGAGATCTCACAGGGGCTCAAGGCCATCGCCAAGGAACTCGACATCCCTGT 1862 Query 8901 CATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCA- 8959 |||||||||||||||||| ||| | | || | ||| | |||| | ||||| | Sbjct 1863 GATCGCGCTGTCGCAGCTTTCGCGACAGGTGGAAAGCCGCGAAGACAAAC-GCCCGCAAT 1921 Query 8960 TGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGT 9005 ||||||| || || || ||||| ||||||||||||| |||||||| Sbjct 1922 TGTCCGACCTTCGGGAATCGGGCTCGATCGAGCAGGACGCCGACGT 1967 >seq3550 Length=1686 Score = 82.4 bits (90), Expect = 2e-11 Identities = 98/131 (75%), Gaps = 4/131 (3%) Strand=Plus/Minus Query 8878 GCGAAGGAACTCGACGTTCCGATCATCGCGCTGTCGCAGCTTAATCGAGGGCTCGAGAAT 8937 |||||||||||| |||| ||| ||||||| ||||| ||||| || | | || || Sbjct 638 GCGAAGGAACTCAACGTCCCGGTCATCGCCCTGTCACAGCTGTCGCGTCAGGTGGAAAAC 579 Query 8938 CGCCCAAACAAGCGGCCCGTCA--TGTCCGATCTGCGCGAGTCGGGTGCGATCGAGCAGG 8995 ||| | ||||| ||| ||| |||| || ||||| || || || |||||||||||| Sbjct 578 CGCGAAGACAAGAAGCC--TCAGCTGTCTGACCTGCGTGAATCCGGCTCGATCGAGCAGG 521 Query 8996 ATGCCGACGTG 9006 | ||||||||| Sbjct 520 ACGCCGACGTG 510 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127520492409492