Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq4708 138 1e-27 seq5801 134 2e-26 seq4240 104 3e-17 seq339 93.3 5e-14 >seq4708 Length=1380 Score = 138 bits (152), Expect = 1e-27 Identities = 264/383 (69%), Gaps = 12/383 (3%) Strand=Plus/Minus Query 12690 ACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATG 12749 || || | || ||| ||||| ||||| ||||| | || || ||||||| || | Sbjct 733 ACTGTCACCTGACGGTCAAAACGACCCGGGCGCAAAAGCGCCGGATCAAGGACGTCTGGG 674 Query 12750 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTC 12809 |||||||| ||||| | | | |||||| | | || || |||||||||||| | Sbjct 673 CGGTTCGTTGCCGCAACAATGATGATGCCTTCATTGGCTTCAAAACCATCCATCTCAACC 614 Query 12810 AAGAGTTGATTGATGGTTTGTTCACGTTCATCATT--CGCGGGCATACCACCCGCACTGC 12867 || || || || | ||||| || || |||||||| ||| | || ||| || | || Sbjct 613 AATAGCTGGTTCAATGTTTGCTCGCGCTCATCATTACCGCCGCCAAG--ACCAGCGCCGC 556 Query 12868 GTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCACG-- 12925 || ||||| ||||||||||||||||| || | |||||| || ||| ||| Sbjct 555 GTGAACGGCCGACCGCGTCAATTTCGTCAATAAAGATGATACAAGGCGCATT---ACGTT 499 Query 12926 -GGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAA 12984 ||| || || || || || || | |||| || ||||| ||||||||||| |||| Sbjct 498 TGGCTTGCTCGAACATGTCGCGGACACGGCTGGCGCCTACACCGACAAACATCTCTACAA 439 Query 12985 AATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCG 13043 ||| | | ||| |||| || ||| |||||| | |||||| || || || |||||| Sbjct 438 AATCAGACCCTGAA-ATTGTGAAGAATGGGACGCCTGCTTCACCAGCAATCGCACGGGCG 380 Query 13044 AGGAGGGTCTTCCCCGTCCCTGG 13066 || ||||| || || || ||||| Sbjct 379 AGAAGGGTTTTACCTGTTCCTGG 357 >seq5801 Length=1198 Score = 134 bits (148), Expect = 2e-26 Identities = 263/383 (69%), Gaps = 12/383 (3%) Strand=Plus/Minus Query 12690 ACGGTGATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATG 12749 || |||| || ||| ||||| || || || || | | || ||||| | ||| || Sbjct 479 ACAGTGACCTGACGGTCAAAACGGCCCGGCCGTAACAACGCAGGATCAAGCACATCTTTG 420 Query 12750 CGGTTCGTCGCCGCGATGACAACGATGCCCGTCTCGTTA---TCGAAGCCATCCATCTCA 12806 ||||| || |||||||||| | | || |||||| || || |||||||||||| Sbjct 419 CGGTTTGTGGCCGCGATGATGATCACACCT---TCGTTAGCTTCAAAACCATCCATCTCA 363 Query 12807 GTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATT--CGCGGGCATACCACCCGCAC 12864 ||| || || |||| |||||||| || || || || ||| | |||| | | |||| Sbjct 362 ACCAACAGCTGGTTGAGCGTTTGTTCGCGCTCGTCGTTACCGCCGCCATAGC--CAGCAC 305 Query 12865 TGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGATTTTCAC 12924 || || |||||| || || |||||||| || || || ||||| ||| ||| | Sbjct 304 CACGGTGACGACCGACCGCATCGATTTCGTCGATAAACACAATACATGGTGCATTCTTCT 245 Query 12925 GGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAA 12984 ||| |||||| || || ||||| | |||||||||||||||| ||||| || |||| Sbjct 244 TGGCCTGTTCAAACATGTCACGCACACGGCTGGCACCGACACCCACGAACATTTCAACAA 185 Query 12985 AATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCG 13043 | | | | | | || | | ||| ||||| | || ||||||||||| || || Sbjct 184 AGTCAGACCCCG-AGATGGTAAAGAATGGGACACCCGCCTCGCCCGCGATGGCGCGCGCC 126 Query 13044 AGGAGGGTCTTCCCCGTCCCTGG 13066 || ||||| || ||||| || || Sbjct 125 AGCAGGGTTTTACCCGTACCCGG 103 >seq4240 Length=1484 Score = 104 bits (114), Expect = 3e-17 Identities = 212/310 (68%), Gaps = 14/310 (5%) Strand=Plus/Plus Query 12798 TCCATCTCAGTCAAGAGTTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCA 12857 |||||||| || || || || | ||||| ||||| |||||||| || | ||| Sbjct 2 TCCATCTCGACCAGCAGCTGGTTCAGCGTTTGCTCACGCTCATCATTGCCG--CCGCCCA 59 Query 12858 --CCCGCACTGCGTTGCTTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT- 12914 ||||| | ||| ||| || ||||| || || ||||| |||||||| || || ||| Sbjct 60 GGCCCGCGCCGCGGTGCCGGCCAACGGCATCGATCTCGTCGATGAAAACAATGCAGGGTG 119 Query 12915 ---TGATTTTCACGGGCAACTTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACA 12971 | |||| | || ||||| || || ||||| | |||| || || || ||| Sbjct 120 CGTTCTTTTTTGCCTGC----TCAAACATGTCGCGCACGCGGCTGGCGCCAACGCCTACA 175 Query 12972 AACATCTCCACAAAATTGGCGGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGC 13030 ||||| || || || | || ||||| || | || ||| || || |||| ||||||||| Sbjct 176 AACATTTCGACGAAGTCGGACCCGGAA-ATCGTGAAGAACGGCACATTGGCTTCACCCGC 234 Query 13031 GATGGCTCGGGCGAGGAGGGTCTTCCCCGTCCCTGGTTTCCCCGCGAGAAGGGCACCACG 13090 ||| || ||||| || | |||||| || || || || ||| | || || || || || Sbjct 235 GATCGCGCGGGCCAGCAAGGTCTTGCCGGTGCCCGGGGGGCCCACAAGCAGCGCGCCGCG 294 Query 13091 TGGGATCCTG 13100 || ||| || Sbjct 295 CGGAATCTTG 304 >seq339 Length=9696 Score = 93.3 bits (102), Expect = 5e-14 Identities = 251/375 (67%), Gaps = 12/375 (3%) Strand=Plus/Minus Query 12698 CTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTTCGT 12757 || ||| ||||| ||||| || || || || || ||| || | || ||||| || Sbjct 3359 CTGACGGTCAAAACGACCGGGACGCAGCAGCGCCGGGTCCAGAACGTCCGGACGGTTGGT 3300 Query 12758 CGCCGCGATGACAACGATGCCCGTCTCGTTA---TCGAAGCCATCCATCTCAGTCAAGAG 12814 ||| || || | | ||||| | || || || |||||||||||||| || | Sbjct 3299 CGCTGCAATCAGGATGATGC---TTTCATTGGGCTCAAAGCCATCCATCTCCACCAGCAA 3243 Query 12815 TTGATTGATGGTTTGTTCACGTTCATCATT-CGCGGGCATACCACCCGCACTGCGTTGCT 12873 || |||| || ||||| || |||||||| | | || | || |||| || || Sbjct 3242 CTGGTTGAGTGTCTGTTCGCGCTCATCATTACCCCCGC-CAAGTCCGGCACCACGATGGC 3184 Query 12874 TACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGT-TGATTTTCACGGGCAACT 12932 |||||| || ||||| || || ||||| | ||| || ||| | | ||| | | | Sbjct 3183 GACCGACCGCATCAATCTCATCGATGAAGATGATGCAAGGTGAGTTCTTCTTCGCCTGC- 3125 Query 12933 TCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGCG 12992 || || || || ||||| | | |||||||| || |||||||| || ||||| | | Sbjct 3124 TCGAACATGTCGCGCACGCGGCTCGCACCGACGCCTACAAACATTTCAACAAAGTCAGAA 3065 Query 12993 GCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGGT 13051 ||||| || | || ||| || || || | ||| || || ||||| || || || || || Sbjct 3064 CCGGAA-ATCGTGAAGAACGGCACATTCGCTTCGCCTGCAATGGCCCGCGCCAGCAGCGT 3006 Query 13052 CTTCCCCGTCCCTGG 13066 ||| || || ||||| Sbjct 3005 CTTACCAGTACCTGG 2991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613380073639320