Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_014461.1 Length=73453 Score E Sequences producing significant alignments: (Bits) Value seq83 87.8 8e-13 seq5839 86.0 3e-12 seq5379 86.0 3e-12 seq30 82.4 4e-11 >seq83 Length=22750 Score = 87.8 bits (96), Expect = 8e-13 Identities = 57/63 (90%), Gaps = 0/63 (0%) Strand=Plus/Plus Query 61305 TTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCTGCA 61364 ||||||||||||||||||| || |||| |||||| ||||||||||||||| ||||||||| Sbjct 9566 TTAGCTCAGTTGGTAGAGCGGCTGACTTTTAATCAGTAGGTCGCAGGTTCGAATCCTGCA 9625 Query 61365 CGG 61367 || Sbjct 9626 GGG 9628 >seq5839 Length=1196 Score = 86.0 bits (94), Expect = 3e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61303 CGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCTG 61362 ||||||||||||||||||||| | |||| |||||| || |||||||||||| ||||||| Sbjct 670 CGTTAGCTCAGTTGGTAGAGCAACTGACTTTTAATCAGTGGGTCGCAGGTTCGAATCCTG 611 Query 61363 CACGG 61367 ||||| Sbjct 610 CACGG 606 >seq5379 Length=1267 Score = 86.0 bits (94), Expect = 3e-12 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 61303 CGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCTG 61362 ||||||||||||||||||||| | |||| |||||| || |||||||||||| ||||||| Sbjct 156 CGTTAGCTCAGTTGGTAGAGCAACTGACTTTTAATCAGTGGGTCGCAGGTTCGAATCCTG 215 Query 61363 CACGG 61367 ||||| Sbjct 216 CACGG 220 >seq30 Length=44443 Score = 82.4 bits (90), Expect = 4e-11 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 61303 CGTTAGCTCAGTTGGTAGAGCTGCCGACTCTTAATCGGTAGGTCGCAGGTTCAAATCCTG 61362 ||||||||||||||||||||| | ||||||||||| ||||||| |||||| |||||| Sbjct 33226 CGTTAGCTCAGTTGGTAGAGCGGGTGACTCTTAATCACTAGGTCGTAGGTTCGAATCCTA 33167 Query 61363 CACGG 61367 ||||| Sbjct 33166 CACGG 33162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 234877337628758