Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_014467.1 Length=176788 Score E Sequences producing significant alignments: (Bits) Value seq44 87.8 2e-12 seq9172 86.0 7e-12 >seq44 Length=32007 Score = 87.8 bits (96), Expect = 2e-12 Identities = 136/193 (70%), Gaps = 1/193 (1%) Strand=Plus/Plus Query 40037 AGAAAAA-CCAGACGATCGCGGGATCATCGTTTCCGCCTGGAACCCTGTTGATCTTGATG 40095 |||| || |||||| || || | ||||| || |||||||| | || | ||| Sbjct 27666 AGAATAATCCAGACTCCCGGCGGCTGATCGTGTCGGCCTGGAATGTGGCGGACGTAGATA 27725 Query 40096 ATATGGCTTTGCGTCCGTGTCACTGTTTCTTCCAGTTCGTCGTAATCAACGGTAAACTGT 40155 ||||||| ||| || ||||||||| | ||||||||| || |||| || || | Sbjct 27726 ATATGGCGCTGCCGCCCTGTCACTGTCTGTTCCAGTTCTATGTGGCGGACGGCAAGCTTT 27785 Query 40156 CTCTACAGTGGTATCAGCGTTCAGTTGATGTCTTCTTAGGGTTGCCGTTCAATATCGCCT 40215 | ||| |||||||| || | |||||| ||||| || |||||||||| ||||||| Sbjct 27786 CCTGCCAGCTCTATCAGCGCTCCGCTGATGTGTTCTTGGGCGTGCCGTTCAACATCGCCT 27845 Query 40216 CCTACGCTCTCCT 40228 |||| || || || Sbjct 27846 CCTATGCGCTGCT 27858 >seq9172 Length=875 Score = 86.0 bits (94), Expect = 7e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 49781 GGCCCTTTAGCTTAATTGGTTAGAGCGGGTGACTCATAATCGCGCGGTTGCTGGTTCGAA 49840 ||||| ||||| | |||||||||||| |||||||||||| |||| |||||||||| Sbjct 451 GGCCCCATAGCTCAGTTGGTTAGAGCGCTCGACTCATAATCGATCGGTCGCTGGTTCGAG 510 Query 49841 TCCAGCAGGGGCCACCA 49857 |||||| |||||||||| Sbjct 511 TCCAGCTGGGGCCACCA 527 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565476401936160