Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3858 105 3e-17 seq1978 100 1e-15 >seq3858 Length=1591 Score = 105 bits (116), Expect = 3e-17 Identities = 233/350 (67%), Gaps = 11/350 (3%) Strand=Plus/Plus Query 451248 AAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTT 451307 ||||||||||| || | | || || || ||||||||||| || ||| ||| | || Sbjct 188 AAGAAATTTCAGCTTTCATCCTGACGAAGATGAAAGAAACCGCTGAAGCGTATCTGGGCA 247 Query 451308 CTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAG 451367 | |||||| | || || ||||| ||||| || || || || |||||||| || || | Sbjct 248 GTGAAGTTACGCAGGCCGTTATTACGGTTCCGGCATACTTTAACGATGCACAGCGTCAGG 307 Query 451368 CAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTA 451427 |||| |||||||| || | |||||||| | | ||||| || || || || || || | Sbjct 308 CAACCAAAGATGCCGGTAAGATTGCTGGCCTTGAAGTTCTGCGGATCATCAACGAGCCAA 367 Query 451428 CAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaT-ATT 451486 | || || || || || || || || | | ||| |||| ||| | ||| Sbjct 368 CCGCTGCGGCGCTGGCTTACGGCCTTG----------ATAAAGGCGAGAACAAAGTCATT 417 Query 451487 TTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGG 451546 ||| | ||| |||| || || || ||| || | ||| || | || || Sbjct 418 GCAGTCTATGACCTTGGCGGCGGTACATTCGATGTATCATTGCTTGAGATCGGTGACGGT 477 Query 451547 GTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 || |||||||| | | |||||||||||||| || || |||||||| Sbjct 478 GTCTTTGAAGTTCTGTCGACCAATGGTGATACATTCCTTGGCGGTGAAGA 527 >seq1978 Length=2579 Score = 100 bits (110), Expect = 1e-15 Identities = 165/235 (70%), Gaps = 6/235 (3%) Strand=Plus/Minus Query 451310 CCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCA 451369 ||||| || | ||||||||||| || || || || || |||||||| || || || ||| Sbjct 283 CCAGTAACAGCAGCAGTAATTACCGTACCAGCGTACTTTAATGATGCTCAGCGTCAGGCA 224 Query 451370 ACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACA 451429 |||||||| ||||| | |||||||| ||| |||| || ||||| || || || || Sbjct 223 ACTAAAGACGCAGGCCGGATTGCTGGCTTAGATGTAAAACGGATTATCAACGAGCCAACT 164 Query 451430 GCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTA 451489 || || || || || || || || | || ||||||| || || | || ||| | Sbjct 163 GCTGCGGCGCTGGCTTACGG--TATG--GATAAAAAGAA--AGGCGACACCAAGATTGCA 110 Query 451490 GTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATG 451544 || | ||| || ||||| || ||| |||| ||| | || |||||| |||| Sbjct 109 GTTTATGACTTAGGTGGCGGTACTTTCGATATCTCTATTATTGAAATTGATGATG 55 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975298771612316