Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3858 120 2e-21 >seq3858 Length=1591 Score = 120 bits (132), Expect = 2e-21 Identities = 164/227 (72%), Gaps = 4/227 (2%) Strand=Plus/Minus Query 518154 CTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAA 518213 |||||| | | ||||||||| || || || | || ||||| ||||| || || || | Sbjct 412 CTTTGTTCTCGCCTTTATCAAGGCCGTAAGCCAGCGCCGCAGCGGTTGGCTCGTTGATGA 353 Query 518214 TTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAAT 518273 | | || ||| | ||| |||||||| | || |||||||| || || || | |||| || Sbjct 352 TCCGCAGAACTTCAAGGCCAGCAATCTTACCGGCATCTTTGGTTGCCTGACGCTGTGCAT 293 Query 518274 CGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGC 518333 ||||||| ||||| ||||| ||||||||||| | || ||||| | || | ||| ||| Sbjct 292 CGTTAAAGTATGCCGGAACCGTAATAACGGCCTGCGTAACTTCACTGCCCAGATA--CGC 235 Query 518334 TT--GCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 || || |||| |||||| || | | || | | |||||||| || Sbjct 234 TTCAGCGGTTTCTTTCATCTTCGTCAGGATGAAAGCTGAAATTTCTT 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3779999794655362