Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq3858 138 1e-27 seq21 129 7e-25 seq3647 105 8e-18 seq2399 95.1 2e-14 seq4943 91.5 2e-13 >seq3858 Length=1591 Score = 138 bits (152), Expect = 1e-27 Identities = 247/359 (69%), Gaps = 20/359 (6%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| |||||||| || | | |||||| || ||||| |||||||||| ||| Sbjct 533 TCGAAGTCTTCACCGCCAAGGAATGTATCACCATTGGTCGACAGAACTTCAAAGACACCG 474 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAA------AATG 7570 | | || | | ||| || ||||| || ||||| || || |||||| | |||| Sbjct 473 TCACCGATCTCAAGCAATGATACATCGAATGTACCGCCGCCAAGGTCATAGACTGCAATG 414 Query 7571 AGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTT 7630 | | |||| ||| |||| ||| || ||||| || | ||||| || ||| Sbjct 413 ACTTTGTTC------TCGCCTTT------ATCAAGGCCGTAAGCCAGCGCCGCAGCGGTT 366 Query 7631 GGTTCATTAATAATACGAAGACAGTTCA-GGCCAGCAATAGTTGCCGCATCTTTCGTCGC 7689 || || || || || || ||| | |||| |||||||||| | | |||||||| || || Sbjct 365 GGCTCGTTGATGATCCGCAGA-ACTTCAAGGCCAGCAATCTTACCGGCATCTTTGGTTGC 307 Query 7690 TTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTT 7749 || || || | |||||||||||| ||||| ||||| | || || | ||| |||| | Sbjct 306 CTGACGCTGTGCATCGTTAAAGTATGCCGGAACCGTAATAACGGCCTGCGTAACTTCACT 247 Query 7750 ACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTT 7808 || ||||||| ||| ||| | |||||||| || || || | | | |||||| |||| Sbjct 246 GCCCAGATACGCTTCAGCGGTTTCTTTCATCTTCGTCAGGATGAAAGCTGAAATTTCTT 188 Score = 82.4 bits (90), Expect = 1e-10 Identities = 197/296 (67%), Gaps = 4/296 (1%) Strand=Plus/Minus Query 6703 AATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGC 6762 |||||| || ||||||| || || | || | |||||| ||| || | ||| || | Sbjct 1284 AATACCGTTCGCATCAATGTCAAAAGTAACCTCAATTTGCGGTAAGCCACGCGGCGCTGG 1225 Query 6763 TGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTC 6822 ||||||| || | || || ||||| ||||||| | ||| | | ||| || Sbjct 1224 TGGAATATCCTCAAGATTGAACTGGCCAAGCGCCTTGTTATCGGCTGCCATTTCACGCTC 1165 Query 6823 ACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTG 6882 || | | ||| || ||||| || || ||||| |||| |||||||||||| | || Sbjct 1164 GCCCTGGAAAACTCGGATCGTCACAGCCGGCTGATTGTCTTCAGCCGTTGAGAAGGTCTG 1105 Query 6883 TTCTTTCTTAGATGGAATCGTCGTATTTC--TCGGAATAACCGGGGTCATAATACCACCC 6940 ||||| | || |||||||| || | ||| |||| | || | | ||| ||| Sbjct 1104 GCTCTTCTTGGTCGGGATCGTCGTGTTACGGTCG--ATAAGACGCGTAAACACACCGCCC 1047 Query 6941 ATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGAAC 6996 | || |||| || || |||||||| |||||||| | || | | ||||| ||| Sbjct 1046 AGTGTCTCGATACCCAGCGACAGAGGCGTCACGTCAAGCAGAACAACGTCTTTAAC 991 >seq21 Length=50220 Score = 129 bits (142), Expect = 7e-25 Identities = 234/336 (70%), Gaps = 10/336 (3%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| ||||||||||||| | |||||||| ||||| || |||||||||| ||| Sbjct 35603 TCGAAGTCTTCACCACCCAGGAACGTATCCCCATTGGTCGACTTCACTTCAAAGACACCG 35662 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 | | || | | | ||| || |||||||||||||||||||||||| | || || Sbjct 35663 TCGCCGATTTCGAGAACCGACACGTCAAACGTACCACCACCCAGGTCATA---GACCGCG 35719 Query 7577 TTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCA 7636 | || | | | | ||| ||||| ||||| || | ||||| || || || || Sbjct 35720 ATGGT---GCGGCCATCAGACTTGTCGAGGCCGTAGGCAAGTGCCGCGGCTGTCGGCTCG 35776 Query 7637 TTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGTC 7694 || || || || || || ||| ||||| ||||| ||||| |||||||| || || || | Sbjct 35777 TTGATGATCCGGAG-CACTTCAAGGCCGGCAAT-CTTGCCGGCATCTTTTGTTGCCTGGC 35834 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 |||||| || |||||||| || || ||||| | || || | ||| || || ||| Sbjct 35835 GTTGCGCGTCATTAAAGTAAGCTGGAACCGTGATAACGGCCTGCGTCACAGGCTCGCCGG 35894 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAA 7790 | | | || ||| | |||||||| || ||||| Sbjct 35895 TAAAGGTCTCAGCGGTCTCTTTCATCTTCTGAAGAA 35930 >seq3647 Length=1650 Score = 105 bits (116), Expect = 8e-18 Identities = 226/330 (68%), Gaps = 12/330 (4%) Strand=Plus/Plus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 || || ||||||||||||||| ||||| || ||| | ||||||||| || | || Sbjct 724 TCAAAGTCTTCACCACCCAAGAAAGTATCACCATTGGTGGATTTGACTTCGAACAGGCCG 783 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAAT-GAGTAC 7575 | || || | | | | |||||||||||||| ||||| |||||| | | | | Sbjct 784 TCATCGATTTCCAGAATGGTCACATCAAACGTACCGCCACCAAGGTCATAGACCGCGATG 843 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 ||| || || | ||||||| | | |||||| || | || || ||||||||||| Sbjct 844 GTTTGTGTCTGC-TCTTTGTCC------AAACCGTAGGCCAGCGCAGCAGCCGTTGGTTC 896 Query 7636 ATTAATAATACGAAGACAGTTC-AGGCCAGCAATAGTTGCC-GCATCTTTCGTCGCTTGT 7693 || || || || || || ||| || || || || ||||| || ||||| || || || Sbjct 897 GTTGATGATCCGCAG-CACTTCGAGACCGGCGAT-CTTGCCGGCGTCTTTTGTGGCCTGA 954 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCG 7753 || || | ||||| || || || || || || | |||||| | || || | || || Sbjct 955 CGCTGGGCGTCGTTGAAATAAGCAGGTACGGTGATGACCGCTTGGGTCACATCCTCGCCA 1014 Query 7754 AGATACGATTCCGCGATATCTTTCATTTTG 7783 ||||| || ||| | |||||||||||| Sbjct 1015 AGATAGCTCTCGGCGGTTTCTTTCATTTTG 1044 >seq2399 Length=2249 Score = 95.1 bits (104), Expect = 2e-14 Identities = 197/290 (68%), Gaps = 10/290 (3%) Strand=Plus/Minus Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 || ||||| ||| | ||| ||||||| || ||| | || || || | |||||||| Sbjct 736 ACCGTTAACTATCGCGAAGCATACGGGATCCATGCTTCTAACGGCATTTTATTCAACCAT 677 Query 22624 GAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCT--A 22681 || || | || || |||| || || ||||| ||||| || | || || || | Sbjct 676 GAGGGCCCAACGCGAGGCGAAACGTTTGTAACACGGAAAATCACTCGCGCGGTTGCCGCA 617 Query 22682 ATATCAGTGCAGGTAAA---CAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAG 22738 || ||| | || | ||||| ||||| |||||||| |||||| |||| || | Sbjct 616 AT-TCACTTGGGGCACCAGTCAAAACTGTTT----CTTGGTAATCTAGATTCGAAGCGCG 562 Query 22739 ATTGGGGTCATGCACGCGATTACGTGAAATGTATGTGGAAAATATTACAACAAGATAAAC 22798 ||||||| |||||||||||||| ||| || |||||||| || | || || || || | Sbjct 561 ATTGGGGGCATGCACGCGATTATGTGGAAGGTATGTGGCGTATCGTCCAGCAGGACAAGC 502 Query 22799 CGGAAGATTTTGTTATTGCAACAGGCGTAACAACAACCGTGAGAGAATTT 22848 | || |||| || | || || |||| ||| || || |||| ||| Sbjct 501 CCGATGATTACGTGCTGGCCACCGGCGAGACACGCACAGTTCGAGAGTTT 452 >seq4943 Length=1333 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/166 (74%), Gaps = 4/166 (2%) Strand=Plus/Minus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 || || || || || || || | || |||||||| ||||| || |||||||| || | Sbjct 1290 TTTTTGTCCAGCCCATAGGCCAGCGCGGCCGCCGTCGGTTCGTTGATAATACGCAGT-AC 1232 Query 7655 TTCA-GGCCAGCAATAGTTGCCG-CATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGT 7712 |||| |||| || || |||||| |||| || || || || |||||||||||||| || | Sbjct 1231 TTCAAGGCCGGCGATC-TTGCCGGCATCCTTGGTGGCCTGCCGTTGCGAATCGTTGAAAT 1173 Query 7713 AGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATA 7758 ||||||| || || | ||||| | | ||||| || || ||||| Sbjct 1172 AGGCCGGCACGGTAATCACCGCCTGGGCGACTTCCTCGCCCAGATA 1127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635001192544680