Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq339 113 5e-20 seq16340 93.3 5e-14 seq5801 91.5 2e-13 >seq339 Length=9696 Score = 113 bits (124), Expect = 5e-20 Identities = 259/384 (67%), Gaps = 12/384 (3%) Strand=Plus/Minus Query 11490 CACCTGAATCTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGAC 11549 |||| || || ||| || |||||||| || || || || || || |||| || Sbjct 3368 CACCACAACCTGACGGTCAAAACGACCGGGACGCAGCAGCGCCGGGTCCAGAACGTCCGG 3309 Query 11550 ACGGTTTGTAGCGGCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTC 11606 |||||| || || ||||| | | |||| | |||||| || || || ||||| || Sbjct 3308 ACGGTTGGTCGCTGCAATCAGGATGATGC---TTTCATTGGGCTCAAAGCCATCCATCTC 3252 Query 11607 TGTGAGAAGCTGGTTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCA--CCTGCC 11664 || | |||||||| |||||||| |||||||| || | | | | || || Sbjct 3251 CACCAGCAACTGGTTGAGTGTCTGTTCGCGCTCATCATT--ACCCCCGCCAAGTCCGGCA 3194 Query 11665 GAACGCTTCTTACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCA 11724 ||| | |||||| || ||||||||||||||||| | ||| || ||| ||| Sbjct 3193 CCACGATGGCGACCGACCGCATCAATCTCATCGATGAAGATGATGCAAGGTGAGTTCTTC 3134 Query 11725 CGTGCCTGTTCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACG 11784 ||||| ||||| | || || || || |||| || || ||||| ||||| ||||| Sbjct 3133 TTCGCCTGCTCGAACATGTCGCGCACGCGGCTCGCACCGACGCCTACAAACATTTCAACA 3074 Query 11785 AAGTTTGCGGCAGAACAC-TGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGC 11843 |||| | | ||| | |||| ||| || ||||| | || || || ||||| || || Sbjct 3073 AAGTCAGAACCGGAAATCGTGAA-GAACGGCACATTCGCTTCGCCTGCAATGGCCCGCGC 3015 Query 11844 GAGGAGAGTCTTACCCGTACCAGG 11867 || || |||||||| ||||| || Sbjct 3014 CAGCAGCGTCTTACCAGTACCTGG 2991 >seq16340 Length=509 Score = 93.3 bits (102), Expect = 5e-14 Identities = 200/295 (68%), Gaps = 18/295 (6%) Strand=Plus/Plus Query 11503 CGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGTAGCG 11562 || || || ||||| || || || || ||| ||| |||| || |||||| ||||| Sbjct 198 CGGTCAAAGCGACCCGGACGCAGCAGCGCAGGATCCAGAACGTCCGGACGGTTGGTAGCA 257 Query 11563 GCAATGACTACAATGCCAGTCTCATTG---TCGAAACCGTCCATTTCTGTGAGAAGCTGG 11619 || || || | | ||| || ||| || || |||||||| || | |||||| Sbjct 258 GCGATCACGATGACGCCT---TCGTTGCCTTCAAAGCCGTCCATCTCAACCAACAGCTGG 314 Query 11620 TTGATCGTCTGTTCACGCTCATCGTTGGAGGGCATACCACCTGCCGA----ACGCTTCTT 11675 || | |||||||||||||| || | || || | | ||||| ||| | Sbjct 315 TTCAGGGTCTGTTCACGCTCGTCAT----GGCCACCGCCCATGCCGGCGCCACGATGGCG 370 Query 11676 ACCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGT--GCCTGT 11733 |||||| || |||||||||||||| || | |||||| || | || || | ||||| Sbjct 371 ACCGACCGCATCAATCTCATCGATAAAAATGATACAGGG--GCTTTGCTTCTTGGCCTGC 428 Query 11734 TCGAAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGT 11788 ||||| | ||||| ||||| || || || || ||||||||||| ||||||| Sbjct 429 TCGAACATGTCACGAACACGGGAAGCACCCACGCCCACGAACATCTCTACGAAGT 483 >seq5801 Length=1198 Score = 91.5 bits (100), Expect = 2e-13 Identities = 244/371 (66%), Gaps = 4/371 (1%) Strand=Plus/Minus Query 11499 CTTACGATCGAAACGACCTGGGCGGAGTAGAGCATCATCAAGAATATCGACACGGTTTGT 11558 || ||| || ||||| || || || | | ||| |||||| | ||| |||||||| Sbjct 471 CTGACGGTCAAAACGGCCCGGCCGTAACAACGCAGGATCAAGCACATCTTTGCGGTTTGT 412 Query 11559 AGCGGCAATGACTACAATGCCAGTCTCATTGTCGAAACCGTCCATTTCTGTGAGAAGCTG 11618 || || |||| | | || | | || ||||| ||||| || | ||||| Sbjct 411 GGCCGCGATGATGATCACACCTTCGTTAGCTTCAAAACCATCCATCTCAACCAACAGCTG 352 Query 11619 GTTGATCGTCTGTTCACGCTCATCGTTGGAG--GGCATACCACCTGCCGAACGCTTCTTA 11676 ||||| ||| ||||| ||||| ||||| | | |||| | | || ||| | | Sbjct 351 GTTGAGCGTTTGTTCGCGCTCGTCGTTACCGCCGCCATAGC--CAGCACCACGGTGACGA 294 Query 11677 CCGACAGCGTCAATCTCATCGATGAATACGATACACGGTTGGTTGGCACGTGCCTGTTCG 11736 ||||| || || || || ||||| || || ||||| ||| || |||||||| Sbjct 293 CCGACCGCATCGATTTCGTCGATAAACACAATACATGGTGCATTCTTCTTGGCCTGTTCA 234 Query 11737 AAAAGTTCACGTACACGCTTCGCTCCAACACCTACGAACATCTCAACGAAGTTTGCGGCA 11796 || | ||||| ||||| | || || ||||| |||||||| ||||| |||| | | Sbjct 233 AACATGTCACGCACACGGCTGGCACCGACACCCACGAACATTTCAACAAAGTCAGACCCC 174 Query 11797 GAACACTGAATGAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTA 11856 || || ||| || ||| | ||| || |||||||| || || || || || ||| Sbjct 173 GAGATGGTAAAGAATGGGACACCCGCCTCGCCCGCGATGGCGCGCGCCAGCAGGGTTTTA 114 Query 11857 CCCGTACCAGG 11867 |||||||| || Sbjct 113 CCCGTACCCGG 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588853956810600