Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq4708 141 1e-28 seq5801 120 4e-22 seq339 107 2e-18 seq6198 95.1 1e-14 >seq4708 Length=1380 Score = 141 bits (156), Expect = 1e-28 Identities = 339/505 (67%), Gaps = 26/505 (5%) Strand=Plus/Minus Query 9188 CTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGT 9247 || ||| ||||| ||||| || || | ||||| |||||||| || ||| ||||| Sbjct 725 CTGACGGTCAAAACGACCCGGGCGCAAAAGCGCCGGATCAAGGACGTCTGGGCGGTTCGT 666 Query 9248 CGCGGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAAAG 9304 || || | | | || ||| ||||| ||||||||||||||||| ||| || Sbjct 665 TGCCGCAACAATGATGATGCCT---TCATTGGCTTCAAAACCATCCATCTCAACCAATAG 609 Query 9305 TTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGC 9362 ||||| | ||||| || || |||||||| ||| | || |||||| | |||| Sbjct 608 CTGGTTCAATGTTTGCTCGCGCTCATCATTACCGCCGCCAAG--ACCAGCGCCGCGTGAA 551 Query 9363 TTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATT----TTCGCGGGC 9418 || || || ||||| || ||||| |||| ||||| || ||| || || || Sbjct 550 CGGCCGACCGCGTCAATTTCGTCAATAAAGATGATACAAGGCGCATTACGTTTGGCTTGC 491 Query 9419 GATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTT 9478 || || | ||||| || | ||||||| ||||| ||||||||||| ||||| | Sbjct 490 ----TCGAACATGTCGCGGACACGGCTGGCGCCTACACCGACAAACATCTCTACAAAATC 435 Query 9479 TGCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAA 9537 | | ||| |||| || ||| ||||| | |||||| ||||| || |||||||||| Sbjct 434 AGACCCTGAA-ATTGTGAAGAATGGGACGCCTGCTTCACCAGCAATCGCACGGGCGAGAA 376 Query 9538 GAGTCTTACCCGTACCTGGCTTACCCGCGAGGAGGGCACCCCGTGGAATCTTGGCGCC-- 9595 | || ||||| || |||||| || ||||| || || || || || |||| Sbjct 375 GGGTTTTACCTGTTCCTGGCGGTCCAATCAGGAGTGCGCCTTTGGGGATTTTACCGCCAA 316 Query 9596 -ACTTCCAAAGTATCTCTCAGGTTGCTTGAGAAAATCCACAATCTCTTCCAATTCATCTT 9654 || | || | | || || | || || || || |||| |||||||||||| |||| Sbjct 315 GACGTTGGAATTTTGTC---GGATCTTTCAGGAAGTCGACAACCTCTTCCAATTCTTCTT 259 Query 9655 TGGCGGCGTCAATCCCCTCAACATC 9679 | || | |||| || ||||||| Sbjct 258 TTGCTTCATCAACGCCTGCAACATC 234 >seq5801 Length=1198 Score = 120 bits (132), Expect = 4e-22 Identities = 257/378 (68%), Gaps = 12/378 (3%) Strand=Plus/Minus Query 9185 GATCTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATT 9244 || || ||| ||||| || || || || | | ||| |||||| | ||| ||| || Sbjct 474 GACCTGACGGTCAAAACGGCCCGGCCGTAACAACGCAGGATCAAGCACATCTTTGCGGTT 415 Query 9245 CGTCGCGGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAA 9301 || || ||||||| | | |||| || ||| ||||||||||||||||| ||| Sbjct 414 TGTGGCCGCGATGATGATCACACCT---TCGTTAGCTTCAAAACCATCCATCTCAACCAA 358 Query 9302 AAGTTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGT 9359 || ||||| | |||||||| || || || || ||| | |||| ||||||| || Sbjct 357 CAGCTGGTTGAGCGTTTGTTCGCGCTCGTCGTTACCGCCGCCATA--GCCAGCACCACGG 300 Query 9360 TGCTTTCCCACGGCATCAATCTCATCAATGAAGACAATACATGGTTGATTTTCGCGGGCG 9419 || || || ||||| || || || || || |||||||||||| ||| | ||| Sbjct 299 TGACGACCGACCGCATCGATTTCGTCGATAAACACAATACATGGTGCATTCTTCTTGGCC 240 Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479 |||||| | || || || | |||| || ||||| || ||||| || ||||||| Sbjct 239 TGTTCAAACATGTCACGCACACGGCTGGCACCGACACCCACGAACATTTCAACAAAGTCA 180 Query 9480 GCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 9538 | | | | || | | ||| |||||| | || ||||| ||||| || || || || Sbjct 179 GACCCCG-AGATGGTAAAGAATGGGACACCCGCCTCGCCCGCGATGGCGCGCGCCAGCAG 121 Query 9539 AGTCTTACCCGTACCTGG 9556 || ||||||||||| || Sbjct 120 GGTTTTACCCGTACCCGG 103 >seq339 Length=9696 Score = 107 bits (118), Expect = 2e-18 Identities = 255/378 (67%), Gaps = 18/378 (5%) Strand=Plus/Minus Query 9188 CTTACGATCAAAGCGACCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGT 9247 || ||| ||||| ||||| ||||| || ||||| || || | || || || || Sbjct 3359 CTGACGGTCAAAACGACCGGGACGCAGCAGCGCCGGGTCCAGAACGTCCGGACGGTTGGT 3300 Query 9248 CGCGGCGATGACAACAATACCTGTTTCATTA---TCAAAACCATCCATCTCTGTCAAAAG 9304 ||| || || | | || | ||||||| ||||| ||||||||||| || | Sbjct 3299 CGCTGCAATCAGGATGATGC---TTTCATTGGGCTCAAAGCCATCCATCTCCACCAGCAA 3243 Query 9305 TTGGTTAATAGTTTGTTCCCGTTCATCATT-CGCTGGCATACCACCAGCACTGCGTTGCT 9363 ||||| | || ||||| || |||||||| | | || | || |||| || || Sbjct 3242 CTGGTTGAGTGTCTGTTCGCGCTCATCATTACCCCCGCCAAGT-CCGGCACCACGATGGC 3184 Query 9364 TTCCCACGGCATCAATCTCATCAATGAAGACAATACATG----GTTGATTTTCGCGGGCG 9419 || || |||||||||||||| ||||||| || || | ||| | ||||| || Sbjct 3183 GACCGACCGCATCAATCTCATCGATGAAGATGATGCAAGGTGAGTTCTTCTTCGCCTGC- 3125 Query 9420 ATTTCAAAGAGATCGCGAACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTT 9479 || || | ||||| || | | || || || || |||||||| || ||||||| Sbjct 3124 ---TCGAACATGTCGCGCACGCGGCTCGCACCGACGCCTACAAACATTTCAACAAAGTCA 3068 Query 9480 GCGGCGGAACATTG-GATGAAGGGGACATTAGATTCACCCGCAATGGCTCGGGCGAGAAG 9538 | ||||| || | || ||| || ||||| | ||| || |||||||| || || || || Sbjct 3067 GAACCGGAA-ATCGTGAAGAACGGCACATTCGCTTCGCCTGCAATGGCCCGCGCCAGCAG 3009 Query 9539 AGTCTTACCCGTACCTGG 9556 |||||||| |||||||| Sbjct 3008 CGTCTTACCAGTACCTGG 2991 >seq6198 Length=1149 Score = 95.1 bits (104), Expect = 1e-14 Identities = 281/422 (67%), Gaps = 16/422 (4%) Strand=Plus/Plus Query 9144 AAGATCTTCTCGCGTCCCCGAACACTTGGGAGAGCTACTTGGATCTTACGATCAAAGCGA 9203 || |||| |||||| || |||| ||| | | |||| | || ||| ||||| || Sbjct 683 AAAATCTGCTCGCGACCTTTAACATCTGGTAAACCTACCACTACCTGACGGTCAAACCGG 742 Query 9204 CCTGGACGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTCGCGGCGATGACAACA 9263 || ||||| | | ||| ||||| | ||| || || || || || || |||| Sbjct 743 CCCGGACGCAATAACGCCGGGTCAAGCACATCTGGCCGGTTGGTGGCAGCAATAACAATG 802 Query 9264 ATACCTGTTTCATT---ATCAAAACCATCCATCTCTGTCAAAAGTTGGTTAATAGTTTGT 9320 |||||| ||||| |||||| |||||||| ||| || | ||||| | ||||| Sbjct 803 ATACCT---TCATTGCCATCAAAGCCATCCATTTCTACCAGCATCTGGTTTAAGGTTTGC 859 Query 9321 TCCCGTTCATCATTCGCTG-GCATACCACCAGCACTGCGTTGCTTTCCCACGGCATCAAT 9379 || || ||||| | | || || ||| |||| || || || || |||||||| Sbjct 860 TCGCGCTCATCGTGGCCACCGCCTAA-ACCGGCACCACGCTGGCGACCTACCGCATCAAT 918 Query 9380 CTCATCAATGAAGACAATACATGGT--TGATTTTCGCGGGCGATTTCAAAGAGATCGCGA 9437 ||||| ||||||| ||||| ||| || |||| ||| ||||| | || ||| Sbjct 919 TTCATCGATGAAGATGATACAGGGTGATGCTTTTTT--GGCTTGCTCAAACATGTCACGA 976 Query 9438 ACCCTTTTGGCGCCCACACCAACAAACATCTCCACAAAGTTTGCGGCGGA-ACATTGGAT 9496 || | ||| || |||||||||||||| || ||||||| | | | || | | | | Sbjct 977 ACACGCGAGGCACCAACACCAACAAACATTTCAACAAAGTCAGAGCCAGAGATAGT-AAA 1035 Query 9497 GAAGGGGACATTAGATTCACCCGCAAT-GGCTCGGGCGAGAAGAGTCTTACCCGTACCTG 9555 ||| || || || | ||| || ||||| | || | | | ||| || ||||| ||||| | Sbjct 1036 GAAAGGTACTTTCGCTTCGCCGGCAATAGCCTTAGCCAACAAG-GTTTTACCGGTACCCG 1094 Query 9556 GC 9557 || Sbjct 1095 GC 1096 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589858548603480