Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015251.1 Length=235229 Score E Sequences producing significant alignments: (Bits) Value seq2646 89.7 8e-13 seq14874 87.8 3e-12 >seq2646 Length=2093 Score = 89.7 bits (98), Expect = 8e-13 Identities = 72/87 (83%), Gaps = 0/87 (0%) Strand=Plus/Minus Query 112288 GGATGTGGTGAAATTGGCAGACACACCAGATTTAGGTTCTGGCGCTTATAGCGTGACGGT 112347 || ||||| | |||||| |||| |||||||||||||||||||||| | | ||||| ||| Sbjct 1916 GGGTGTGGCGGAATTGGTAGACGCACCAGATTTAGGTTCTGGCGCCTTTGGCGTGGGGGT 1857 Query 112348 TCGAGTCCGTCCATCCCCACCAGATTT 112374 |||||||| | || || ||||| |||| Sbjct 1856 TCGAGTCCCTTCACCCGCACCACATTT 1830 >seq14874 Length=573 Score = 87.8 bits (96), Expect = 3e-12 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 113784 GTCTGGGGTTCAAGTCCTCATGGGCCTGCCAAGTTT---GGGGGATTAGCTCAGTTGGAA 113840 ||| | ||||||||||||| | |||| ||| ||| |||| ||||||||| ||| | Sbjct 538 GTCGGAGGTTCAAGTCCTCCTCGGCCCACCACCTTTTTCGGGGCCTTAGCTCAGCTGGGA 479 Query 113841 TGAGCGACTGGTTTGCAACCAGTAGGTCATCGGTTCGACCCCGATATCCTCCACCAATTT 113900 |||| ||| ||||||| ||| ||||| |||||||| |||| || |||||||| ||| Sbjct 478 -GAGCACCTGCTTTGCAAGCAGGGGGTCAGCGGTTCGATCCCGCTAGGCTCCACCATTTT 420 Query 113901 T 113901 | Sbjct 419 T 419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 752448850877880