Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq9616 370 1e-97 seq15666 295 8e-75 seq8042 284 1e-71 seq10300 241 1e-58 seq14097 95.1 1e-14 seq2209 93.3 5e-14 seq9663 87.8 2e-12 seq11117 84.2 3e-11 seq15657 82.4 9e-11 >seq9616 Length=845 Score = 370 bits (410), Expect = 1e-97 Identities = 404/531 (76%), Gaps = 8/531 (2%) Strand=Plus/Plus Query 169860 TGATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGA 169919 ||||||||||||||||||||| || || |||||||||||||| || ||||||||||| Sbjct 25 TGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGA 84 Query 169920 GCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATC 169979 || | |||| |||||||||| |||||||| ||||||||||| | ||||||||||| Sbjct 85 ACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATC 144 Query 169980 TTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAAT--CAGAGAAACAACA 170037 | ||||| || |||||||| ||| | || |||||||||||| | |||||| || Sbjct 145 TCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACAC-TTG 203 Query 170038 GAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACATA 170097 || | | | |||| || | || |||| |||||||| | || || ||||| | |||| Sbjct 204 GATCTA-ACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATA 262 Query 170098 GTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTCA 170157 ||||||||| || ||||||||| | || || |||||||| | || ||||||||| Sbjct 263 TCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTTAACAACTCA 322 Query 170158 AGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAAC--CTCTA 170215 ||||| |||||||||||||||||| | || || || || ||||||| || ||||| Sbjct 323 AGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTA 382 Query 170216 TGGGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTTG 170275 | |||||| |||||||| || ||||| |||||| | ||||| ||| ||||| |||| | Sbjct 383 GGAGTATCT--ACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAG 440 Query 170276 ATGCTAACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAACTTGGGTA 170335 | | | || | | | ||||||| || | || || |||||| || | |||| Sbjct 441 ACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTA 500 Query 170336 TGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCAT 170386 ||||||| |||||||| || ||||||||||||||||||||||| ||||||| Sbjct 501 TGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTAGCAT 551 >seq15666 Length=534 Score = 295 bits (326), Expect = 8e-75 Identities = 386/525 (74%), Gaps = 21/525 (4%) Strand=Plus/Plus Query 169860 TGATGGTATGCCACTAGGTATCTCAGGTACTTTCAACTTT-ATGTTCGTTTTCCAAGCAG 169918 ||||||||||||||||||||| || || ||||||||| ||||| || |||||||||| Sbjct 21 TGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAG 80 Query 169919 AGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGAT 169978 | || |||||| ||||||| || |||||||| ||||||||||| | || ||||||| Sbjct 81 AACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGAT 140 Query 169979 CTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAAT--CAGAGAAACAAC 170036 || ||||| || |||||||| ||| | || |||||||||||| | |||||| || Sbjct 141 CTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGACAC-TT 199 Query 170037 AGAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACATACAACAT 170096 || | | | |||| || | || |||| | | ||| || || || ||||| | ||| Sbjct 200 GGATCTA-ACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCAT 258 Query 170097 AGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCAACAACTC 170156 | ||||||||| || ||||||||| | | || |||||||| | | || |||||||| Sbjct 259 ATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTC 318 Query 170157 AAGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAAC--CTCT 170214 |||||| ||||||||||||||||||| | || || || || ||||||| || |||| Sbjct 319 AAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCT 378 Query 170215 ATGGGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATCAGTTGTT 170274 | | | |||| || ||||| || ||||| |||| | | | || ||||| |||| Sbjct 379 AGGAGCATCT--ACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTA 434 Query 170275 GATGCTAACGGAAAAATCGTCCCA-----ACATGGGGTGATGTTCTAAACAGAGCAAACT 170329 || || | || ||| || | ||||||| || | || || |||||| || Sbjct 435 GA--CTCA---GAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACC 489 Query 170330 TGGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCAC 170374 | ||||||||||| |||||||| || ||||||||| ||||||||| Sbjct 490 TAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq8042 Length=962 Score = 284 bits (314), Expect = 1e-71 Identities = 604/903 (67%), Gaps = 24/903 (3%) Strand=Plus/Minus Query 170664 ACACATGGTGTTGCTTCCTCATATCTTGAGGGATGTAACTTCCTAACAGCAGCAGTTTCC 170723 ||||||||| | || |||||| | || ||||||||||| |||||||||||||| | Sbjct 935 ACACATGGTTTGGCAAGCTCATACTTAGAAGGATGTAACTTTTTAACAGCAGCAGTTAGC 876 Query 170724 ACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGACCTGAAGCACAAGGT 170783 ||||| | | ||||| ||| ||| || | | |||||||| |||||||||||| Sbjct 875 ACACCAGCTAATAGCATGGGACATTCTCTACTACTATTGTGGGGACCAGAAGCACAAGGT 816 Query 170784 TCATTTGTTCGTTGGTTACAACTCGGAGGTTTATGGAACTTTGTAGCATTACATGGAGTC 170843 | ||| | || || | || |||||||| ||| | | || || | || Sbjct 815 TATTTTACAAGATGAACACTTATGGGCTCTTTATGGACCTTCATTACTTTTCACTCAATC 756 Query 170844 TTTGGACTCATAGGTTTCATGCTCAGACAATTTGAGATCGCAGGACTTGTAGGCATCAGA 170903 |||| | | ||||| || | || || |||||||| || | | || | || | Sbjct 755 TTTGCAGTTATAGGCTTTTGTTTAAGGCAGTTTGAGATAGCCAGCTTAGTCAGTATACGT 696 Query 170904 CCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACTAGCATCTTTC-TGAT 170962 || ||||| || || || ||| | | ||| | | | || || || ||| | || Sbjct 695 CCGTACAATGCTCTAGCCTTCACAGGCCCTATAATACTATACA-TATCAGTGTTCGTCAT 637 Query 170963 CTATCCACTAGGTCAGCACAGTTGGTTCTTCGCACCATCATTCGGTGTCGCAGCAATTTT 171022 || || ||||||| | ||||||||| ||||| | || || ||||| || || Sbjct 636 TTACCCTTTAGGTCAATCCTCTTGGTTCTTTGCACCTAGCTATGGAGTTGCAGCCATCTT 577 Query 171023 TCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTTCACATGAT 171082 | | || ||||| ||||||| || ||||| || | || ||||| || ||||| Sbjct 576 CAGGTTCCTCCTATTCCTACAAGGCTTTCACAATTGGACTCTAAACCCATTCCATATGAT 517 Query 171083 GGGTGTTGCAGGAATACTAGGTGGAGCATTATTATGTGCCATTCATGGTGCAACAGTGCA 171142 ||| | |||||||| | || | ||| | |||| || || |||||||| ||||| Sbjct 516 GGGAATAGCAGGAATCTTGGGAGCAGCTCTTTTATCAGCTATACATGGTGCCACAGTAGT 457 Query 171143 GAACACATTGTATGAAGACACATCAGTTTATACTGATAATAAAATTCAAAGCACAACATT 171202 ||||| | ||| |||| || ||| |||||| || Sbjct 456 TAACACTATATATCAAGATGGTCAAGCTTA---------------------CACAACCTT 418 Query 171203 CCGTGCCTTTGATCCTACACAGGAAGAAGAAACTTACAGTATGATTACAGCAAACAGATT 171262 | | | || ||| || || || || |||||| |||| | ||||| || ||||| Sbjct 417 CAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAACAGCTAATAGATT 358 Query 171263 CTGGTCACAGATATTTGGTATTGCTTTCTCTAACAAAAGATTTTTACACTTCCTTATGTT 171322 |||||| || || | || | || || || || || |||| | |||||| | | | Sbjct 357 CTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTCACTTCTTCCTACT 298 Query 171323 GTTCGTTCCTGTCATGGGTATGTGGACATCATCTATAGGTATCGTAGGTCTAGCACTTAA 171382 || || || || || |||||||| || |||||||| || |||| |||||| | || Sbjct 297 ATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAGGACTAGCATTCAA 238 Query 171383 CCTCAGAGCATACGATTTTGTATCTCAAGAGATAAGAGCAGCAGAAGACCCAGAGTTCGA 171442 ||| |||||||| || ||| ||||||| ||| ||| || ||||| ||||||||||| || Sbjct 237 CCTTAGAGCATATGACTTTATATCTCAGGAGTAAAG-GCTGCAGAGGACCCAGAGTTTGA 179 Query 171443 GACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGATGTCATCAGT 171502 ||| ||||| |||||||| ||||| |||||||||||||| | ||||||| || Sbjct 178 GACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTATGGATGGCAGTCCA 119 Query 171503 TGACCAACCACATGAGAACTTCGTATTCCCAGAAGAAGTGTTACCAAGAGGTAACGCACT 171562 || ||||| |||||||||||| |||||| || ||||| | |||||||| ||| |||| Sbjct 118 AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAAGAGGCAACTCACT 59 Query 171563 TTA 171565 || Sbjct 58 ATA 56 >seq10300 Length=803 Score = 241 bits (266), Expect = 1e-58 Identities = 309/419 (74%), Gaps = 9/419 (2%) Strand=Plus/Minus Query 169972 GGAGGATCTTTATTCTCAGCAATGCATGGTTCACTTGTTACTTCATCTCTAAT--CAGAG 170029 ||||||||| ||||| || |||||||| ||| | || |||||||| ||| | | ||| Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGAG 650 Query 170030 AAACAACAGAGCAAGAGTCACAGAACTATGGTTATAAGTTCGGACAAGAAGAAGAAACAT 170089 | || || | | | |||| || | || |||| |||||||| || || || |||| Sbjct 649 ACACTTG-GATCTA-ACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACAT 592 Query 170090 ACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCATTCA 170149 | | |||| ||||||||| || ||||||||| | || || ||||| || | | || | Sbjct 591 ATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTA 532 Query 170150 ACAACTCAAGAAGTCTACACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAA 170209 ||||||||||||||||||||||||||||||||| | || || || || ||||||| | Sbjct 531 ACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCA 472 Query 170210 C--CTCTATGGGTATCTGCACAATGGCATTCAACTTGAATGGTTTCAACTTTAACCAATC 170267 | ||||| | |||||| |||||| | || ||||| ||||| | ||||| || |||| Sbjct 471 CCTCTCTAGGAGTATCT--ACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATC 414 Query 170268 AGTTGTTGATGCTAACGGAAAAATCGTCCCAACATGGGGTGATGTTCTAAACAGAGCAAA 170327 | |||| || | | || | | | ||||||| || | || || |||||| | Sbjct 413 ACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGA 354 Query 170328 CTTGGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCACTAGACCTAGCAT 170386 | | ||||||||||| |||||||| || ||||||||| ||||||||||||| ||||||| Sbjct 353 CCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGCAT 295 >seq14097 Length=611 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 169504 GCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGTTCT 169563 ||||||||| ||||||||| || || || || | |||||||||||| ||||| || Sbjct 70 GCATTCATTCTAGCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGC 129 Query 169564 TTCTTGTATGGTAACAACATC--ATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATCG 169621 || | ||||||||||||||| || | || ||||| | ||| || || ||||| | Sbjct 130 CTCCTATATGGTAACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAG 189 Query 169622 GACTACACTTCTACCCAATCTGGGAAGCA 169650 || | ||||| || ||| | ||||||||| Sbjct 190 GAGTTCACTTTTATCCAGTATGGGAAGCA 218 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 169504 GCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTAGCGGGTTCT 169563 ||||||||| ||||||||| || || || || | |||||||||||| ||||| || Sbjct 416 GCATTCATTCTAGCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGC 475 Query 169564 TTCTTGTATGGTAACAACATC--ATCTCTGGTGCAGTTGTTCCATCATCAAACGCTATCG 169621 || | ||||||||||||||| || | || ||||| | ||| || || ||||| | Sbjct 476 CTCCTATATGGTAACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAG 535 Query 169622 GACTACACTTCTACCCAATCTGGGAAGCA 169650 || | ||||| || ||| | ||||||||| Sbjct 536 GAGTTCACTTTTATCCAGTATGGGAAGCA 564 >seq2209 Length=2381 Score = 93.3 bits (102), Expect = 5e-14 Identities = 178/260 (68%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 154871 TATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGACAGATATG 154930 ||||||| | || ||||| ||||| || |||||||||||| | |||| || | || Sbjct 1897 TATTATGGTCACTTACCCGTCTACTCACGGTGTATTTGAAGAAAGCATTCAGGAGCTGTG 1838 Query 154931 TAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTAAATGCACA 154990 | ||||| || | ||||| ||||| ||| | || || || ||| | ||||| || Sbjct 1837 CGACATCGTCCACTCATACGGTGGCCAGGTGTATATGGACGGCGCCAATATGAATGCTCA 1778 Query 154991 GGTAGGACTAGCAAAACCATGTGAGTAT-GGTGCAGATGTATGTCATCTAAACTTACATA 155049 ||| || || | ||| | ||| ||| |||| |||| || ||||| | || | Sbjct 1777 GGTTGGCTTAACCTCGCCA-GGCTTTATCGGTTCAGACGTATCGCACTTAAACCTGCACA 1719 Query 155050 AAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGTGTAGCAA 155109 |||| ||||||||||| || || || || || || || | || ||||| || || || Sbjct 1718 AAACCTTCTGTATTCCGCACGGCGGCGGTGGCCCGGGTATGGGCCCTATCGGCGTGAAAA 1659 Query 155110 AACATCTCACACCATTTGTA 155129 ||| | |||||||| || Sbjct 1658 GCCATTTAGCACCATTTTTA 1639 >seq9663 Length=843 Score = 87.8 bits (96), Expect = 2e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 169810 GCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATG 169869 || |||| || |||||| | || ||||| | || || || ||| |||||||||| Sbjct 208 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 267 Query 169870 CCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAGCATAACATT 169929 ||||||||||| || || || ||||||| |||||| | |||||| || || ||||| Sbjct 268 CCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATG 327 Query 169930 CTAATGCATCCTTTCCAC 169947 || |||| || |||||| Sbjct 328 CTCGTGCACCCATTCCAC 345 >seq11117 Length=757 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/103 (79%), Gaps = 2/103 (2%) Strand=Plus/Plus Query 169930 CTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTCGGAGGATCTTTATTCTCA 169989 ||| ||||||| |||||||| ||||||||||| | || ||||||||| ||||| Sbjct 626 CTATTGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGATCTCTATTCAGT 685 Query 169990 GCAATGCATGGTTCACTTGTTACTTCATCTCTAAT--CAGAGA 170030 || |||||||| ||| | || |||||||||||| | |||||| Sbjct 686 GCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGA 728 >seq15657 Length=537 Score = 82.4 bits (90), Expect = 9e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 169810 GCTGCATTCGCTGTATTCTTAGTATACCCATTTGGTCAGGGTTCATTCTCTGATGGTATG 169869 || |||| || |||||| | || ||||| | || || || ||| |||||||||| Sbjct 23 GCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATG 82 Query 169870 CCACTAGGTATCTCAGGTACTTTCAACTTTATGTTCGTTTTCCAAGCAGAGCA 169922 ||||||||||| || || |||||||||||||| || ||||||||||| || Sbjct 83 CCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACA 135 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579092779867680