Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015281.1 Length=179563 Score E Sequences producing significant alignments: (Bits) Value seq8042 325 5e-84 seq9616 250 3e-61 seq15666 192 7e-44 seq10300 159 4e-34 >seq8042 Length=962 Score = 325 bits (360), Expect = 5e-84 Identities = 596/862 (69%), Gaps = 11/862 (1%) Strand=Plus/Minus Query 169463 TACTTAGAAGGCGCTAACTTCCTCACTGCTGCTGTCAGTACACCTGCTGACGCTATGGGA 169522 ||||||||||| |||||| | || || || || || ||||| ||| | |||||| Sbjct 914 TACTTAGAAGGATGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGA 855 Query 169523 CACTCACTGCTCTTGCTATGGGGTCCAGAAGCACAAGGCGATTTCGTTCGCTGGTGTCAA 169582 || || || || | | ||||| |||||||||||||| |||| | || | Sbjct 854 CATTCTCTACTACTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAACACTT 795 Query 169583 TTGGGTGGTCTCTGGAACTTTGTAGCACTTCATGGTGCATTTGCATTGATTGGTTTCATG 169642 |||| | | |||| ||| | | |||| |||||| | || || || || Sbjct 794 ATGGGCTCTTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TG 736 Query 169643 CTTA-GGCAGTTTGAATTGGCACGTCTTATTG-GCATCCGTCCTTATAATGCTATTGCAT 169700 ||| |||||||||| | || | |||| | | || ||||| || |||||| | || | Sbjct 735 TTTAAGGCAGTTTGAGATAGCCAG-CTTAGTCAGTATACGTCCGTACAATGCTCTAGCCT 677 Query 169701 TCTCTGGTCCTAT--TGCTGTATTTGTCAGTGTCTTTCTTATCTACCCACTTGGACAGTC 169758 || | || ||||| | || || | ||||||| || || ||||| | || || || Sbjct 676 TCACAGGCCCTATAATACTATACATATCAGTGTTCGTC--ATTTACCCTTTAGGTCAATC 619 Query 169759 CTCATGGTTCTTTGCTCCCTCCTTTGGAGTATCAGCAATCTTCAGGTTCCTGTTGTTCCT 169818 ||| ||||||||||| || || |||||| |||| |||||||||||||| | ||||| Sbjct 618 CTCTTGGTTCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCT 559 Query 169819 GCAAGGATTCCACAACTGGACGTTGAATCCATTCCACATGATGGGTGTAGCAGGAATCTT 169878 ||||| || ||||| ||||| | || |||||||| |||||||| ||||||||||||| Sbjct 558 ACAAGGCTTTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTT 499 Query 169879 GGGCGGAGCATTGCTTTCTGCTATCCATGGTGTTACAGTAGAGAACACATTGTATGAAGA 169938 ||| | ||| | | || ||||| ||||||| ||||||| ||||| | ||| |||| Sbjct 498 GGGAGCAGCTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGA 439 Query 169939 CGGT-GAGCAGGCAAATACTTTCAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATT 169997 ||| ||| || | || |||| | || | | || || || |||||||| | Sbjct 438 TGGTCAAGCTTACACA-ACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACT 380 Query 169998 CTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTATTGCGTTTTCTAACAAGC 170057 ||||| | || || || | |||||||| || | |||| | || ||||| || ||| Sbjct 379 CTATGCTAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGA 320 Query 170058 GTTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTG 170117 | |||||||| || ||| | | || || || || || | ||||| || ||||| | Sbjct 319 GATGGCTTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAG 260 Query 170118 GCATTATTGGCCTTGCTCTCAATCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAG 170177 | || || || || || |||| ||| | || || || || | ||||||| | | | Sbjct 259 GAATAATAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGG 201 Query 170178 CAGCAGAAGATCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGAC 170237 | ||||| || ||||| |||||||| ||||| || || ||||| ||| | |||||||| Sbjct 200 CTGCAGAGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTA 141 Query 170238 TTCGTGCATGGTTGGCACCTGCTGATCAACCACATGAAAACTTCATCTTCCCAGAAGAAG 170297 | ||| |||| ||||| || ||||| ||||| |||||| ||||| || |||| Sbjct 140 TCCGTTTATGGATGGCAGTCCAAGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAG 81 Query 170298 TTCTTCCGAGAGGTAACGCACT 170319 | ||||| ||||| ||| |||| Sbjct 80 TACTTCCAAGAGGCAACTCACT 59 >seq9616 Length=845 Score = 250 bits (276), Expect = 3e-61 Identities = 383/544 (70%), Gaps = 4/544 (1%) Strand=Plus/Plus Query 168304 GGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTACATG 168363 || ||||| |||||| ||||| |||||||| || || ||||| ||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 168364 TTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGCT 168423 || || |||||||| || |||| ||| | |||||||| ||||| || | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 168424 GGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTC 168483 | || || || || | | || ||||||||||| ||| ||||| ||||| ||||| Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 168484 GTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAA 168543 || |||||| || | | | || | || | || || | |||||||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 168544 GAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCT 168603 || ||||| | ||| ||| || ||||| ||||| ||| | | || ||||| ||| | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 168604 TCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATC 168663 || |||||||| | | | ||||||||||| || |||||||| || | || || Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 168664 TGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAAC 168723 ||||||||| | || || || || || ||||| || ||| | || ||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 168724 CAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTTCTGAACC 168781 | || | | || |||| |||| | | | ||||| ||||| || | || || Sbjct 428 GAATCACTTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATA 485 Query 168782 GCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGATC 168841 | || | || ||||||||||| ||||||||| | || ||||||||||||||||| |||| Sbjct 486 GAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATC 545 Query 168842 TTGC 168845 | || Sbjct 546 TAGC 549 >seq15666 Length=534 Score = 192 bits (212), Expect = 7e-44 Identities = 366/535 (68%), Gaps = 7/535 (1%) Strand=Plus/Plus Query 168304 GGTCAAGGTAGTTTCTCTGATGCAATGCCACTCGGAATCTCAGGAACATTCAACTAC-AT 168362 || ||||| |||||| ||||| |||||||| || || ||||| ||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 168363 GTTGGTCTTCCAAGCTGAGCACAATATTCTCATGCATCCCTTCCATATGCTCGGCGTTGC 168422 ||| || |||||||| || ||||| ||| | ||||| || ||||| || | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 168423 TGGGGTATTTGGTGGCAGTTTGTTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCT 168482 | || ||||| || | | || ||||||||||| ||| ||||| ||||| ||||| Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 168483 CGTTAGAGAGACGACTGAAACCGAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGA 168542 || |||||| || | | | || | || | || || | | | ||| || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 168543 AGAAACATACAACATCGTAGCCGCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGC 168602 || ||||| | ||| ||| || ||||| ||||| ||| | || ||||| |||| Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 168603 TTCATTCAACAACTCCCGCTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCAT 168662 | || |||||||| | | | ||||||||||| || |||||||| || | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 168663 CTGGTTCACCGCCCTTGGCGTCTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAA 168722 ||||||||| | || || | || |||||||| || ||| | || | | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 168723 CCAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGATGTTCTGAAC 168780 | || | | || |||| | || | | | ||||| ||||| || | || || Sbjct 422 TGAATCACTTGTAGA--CTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAAT 479 Query 168781 CGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCAC 168835 | || | || ||||||||||| ||||||||| | || |||||| ||||||||| Sbjct 480 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 159 bits (176), Expect = 4e-34 Identities = 279/403 (69%), Gaps = 5/403 (1%) Strand=Plus/Minus Query 168445 TTTAGTGCTATGCACGGAAGTTTGGTTACTTCTTCTCTCGTTAGAGAGACGACTGAAACC 168504 || ||||||||||| ||| ||||| ||||| || || || ||||| || | | Sbjct 696 TTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGAGACACTTGGATCT 638 Query 168505 GAATCCCAAAACTACGGTTACAAGTTCGGACAAGAAGAAGAAACATACAACATCGTAGCC 168564 | || | || | || || | |||||||| || || || ||||| | ||| ||| Sbjct 637 AACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATATAGCATATCAGCA 578 Query 168565 GCTCATGGTTACTTCGGTCGTTTGATCTTCCAATACGCTTCATTCAACAACTCCCGCTCC 168624 || ||||| ||||| ||| | | || |||||||||| | || |||||||| | Sbjct 577 GCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAACAACTCAAGAAGT 518 Query 168625 TTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACCGCCCTTGGCGTC 168684 | ||||||||||| || |||||||| || | || || ||||||||| | || || || Sbjct 517 CTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTA 458 Query 168685 TCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG 168744 || || ||| | || ||| | || || | |||||||| | || | | || |||| Sbjct 457 TCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTTGTAGA--CTCAG 400 Query 168745 --GGTCGTGTGTTGAACACCTGGGCAGATGTTCTGAACCGCGCTGGTCTGGGTATGGAAG 168802 |||| | | | ||||| ||||| || | || || | || | || |||||||||| Sbjct 399 AAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAG 340 Query 168803 TTATGCATGAGCGTAACGCACACAACTTCCCACTCGATCTTGC 168845 | ||||||||| | || |||||| |||||||||| ||||| || Sbjct 339 TAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 574354561889160