Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015282.1 Length=174079 Score E Sequences producing significant alignments: (Bits) Value seq8042 286 4e-72 seq9616 215 6e-51 seq15666 176 5e-39 seq10300 147 2e-30 seq305 91.5 2e-13 seq6435 86.0 7e-12 >seq8042 Length=962 Score = 286 bits (316), Expect = 4e-72 Identities = 473/673 (70%), Gaps = 15/673 (2%) Strand=Plus/Minus Query 165536 CAGTTTGAATTAGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGT 165595 |||||||| |||| | | || |||| ||||| ||||||||| | || ||| | || Sbjct 728 CAGTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGC 669 Query 165596 CCTATCGCTGTTTTTGTTAGC-GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTT 165654 ||||| | | | || | || || |||| |||||| | |||||||| |||||| Sbjct 668 CCTATAA-TACTATACATATCAGTGTTCGTCATTTACCCTTTAGGTCAATCCTCTTGGTT 610 Query 165655 TTTCGCTCC-ATCTTTCGGGGTCGCAGCAATCTTCAGGTTCCTTCTCTTCCTACAAGGAT 165713 || || || | || | || || ||||| |||||||||||||| || ||||||||||| | Sbjct 609 CTTTGCACCTAGCTAT-GGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCT 551 Query 165714 TCCATAACTGGACCTTGAATCCCTTTCATATGATGGGTGTTGCAGGTATCCTGGGTGGTG 165773 | || || ||||| | || || || ||||||||||| | ||||| ||| |||| | | Sbjct 550 TTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAG 491 Query 165774 CATTGCTTTCTGCCATCCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGACG 165833 | | | || || || ||||||| ||||||| || ||| | |||||||||||| | | Sbjct 490 CTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGTCAAG 431 Query 165834 ATGCAAATACTTTCAAGGCATTTGACTCT---ACTCAAGAGGAAGAAACCTACTCAATGG 165890 | | || |||| |||| |||| || ||| || || || ||||| ||| Sbjct 430 CTTACACAACCTTCAGATCATT---CTCTCCAACGCAACCTGAGGAGACTTACTCTATGC 374 Query 165891 TTACTGCAAACCGTTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGTAATAAGAGGTGGT 165950 | || || || | ||||||||||| | |||| | || ||| |||||||| ||| Sbjct 373 TAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGC 314 Query 165951 TGCATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTA 166010 | || ||||| | || || || || || || | ||||| ||| || || || | Sbjct 313 TTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAA 254 Query 166011 TTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAGAGATCAGAGCAGCAG 166070 | || || || |||||||| | || ||||||||| |||| || ||| | | || |||| Sbjct 253 TAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAG 195 Query 166071 AAGACCCAGAGTTTGAAACCTTCTACACGAAAAACATTCTCTTGAATGAAGGTCTTCGTG 166130 | |||||||||||||| || ||||| || || ||||| || | ||||||||| | ||| Sbjct 194 AGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTT 135 Query 166131 CTTGGTTGGCA--CCAGTCGATCAACCGCATGAGAACTTTGTCTTCCCTGAAGAAGTTCT 166188 ||| ||||| ||| || ||||| ||||||||||| |||||||| ||||| || Sbjct 134 TATGGATGGCAGTCCA--AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACT 77 Query 166189 GCCTAGGGGTAAC 166201 || || || ||| Sbjct 76 TCCAAGAGGCAAC 64 >seq9616 Length=845 Score = 215 bits (238), Expect = 6e-51 Identities = 361/520 (69%), Gaps = 4/520 (1%) Strand=Plus/Plus Query 164250 ATGCCCCTGGGCATCTCTGGCACCTTCAACTACATGTTGGTGTTCCAAGCAGAGCACAAC 164309 ||||| || || || ||| |||||||||| ||||| || ||||||||||| |||| | Sbjct 32 ATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACACAGC 91 Query 164310 ATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTTC 164369 || | ||||| || ||||| || | || || || | || || || || ||||| ||| Sbjct 92 ATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATCTCTATTC 151 Query 164370 AGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGAG 164429 ||||| ||||| || || |||| ||||| || || || || || | | || | Sbjct 152 AGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACACTTGGATCTAAC 211 Query 164430 TCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGCT 164489 || | || | || || | || || || | || || ||||| | ||| || || Sbjct 212 TCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATATCAGCAGCA 271 Query 164490 CACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTTG 164549 || || ||||||||| | || || ||||| ||| | || |||||||| | | | Sbjct 272 CATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTTAACAACTCAAGAAGCATA 331 Query 164550 CACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTCC 164609 ||||||||||| || |||||||| || | || || ||||||||| | || || || || Sbjct 332 CACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCT 391 Query 164610 ACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAG--G 164667 || ||||| || ||| | || ||| | ||||||||| | || | | || |||| | Sbjct 392 ACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGA--CTCAGAAG 449 Query 164668 GTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTTA 164727 ||| | | | ||||| ||||| ||| | || || | || | || ||||||||||| | Sbjct 450 GTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAA 509 Query 164728 TGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGC 164767 |||| ||| | || || ||||||||||| || ||||| || Sbjct 510 TGCATGAGAGGAATGCACACAACTTCCCACTAGATCTAGC 549 >seq15666 Length=534 Score = 176 bits (194), Expect = 5e-39 Identities = 347/509 (68%), Gaps = 7/509 (1%) Strand=Plus/Plus Query 164250 ATGCCCCTGGGCATCTCTGGCACCTTCAACTAC-ATGTTGGTGTTCCAAGCAGAGCACAA 164308 ||||| || || || ||| |||||||||| ||||| || ||||||||||| ||||| Sbjct 28 ATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAGAACACAA 87 Query 164309 CATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCTGGCGTATTTGGCGGTTCTCTGTT 164368 ||| | |||||||| ||||| || | || || || | || ||||| || ||||| || Sbjct 88 CATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGATCTCTATT 147 Query 164369 CAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGAAACCACCGAAACTGA 164428 |||||| ||||| || || |||| ||||| || || || || || | | || | Sbjct 148 CAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGACACTTGGATCTAA 207 Query 164429 GTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATACAACATTGTTGCCGC 164488 || | || | || || | | || || || || || ||||| | ||| || || Sbjct 208 CTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCATATCAGCAGC 267 Query 164489 TCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTCAACAACTCCCGTTCCTT 164548 || || ||||||||| | | || ||||| |||| | || |||||||| | | | Sbjct 268 ACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTCAAGAAGCCT 327 Query 164549 GCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTTCACCGCACTTGGTGTTTC 164608 ||||||||||| || |||||||| || | || || ||||||||| | || || | || Sbjct 328 ACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGCATC 387 Query 164609 CACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAG-- 164666 |||||||| || ||| | || | | | |||| | || | | || |||| Sbjct 388 TACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTAGA--CTCAGAA 443 Query 164667 GGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGGTCTGGGTATGGAAGTT 164726 | || | | | ||||| ||||| ||| | || || | || | || ||||||||||| Sbjct 444 GATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTA 503 Query 164727 ATGCACGAGCGTAACGCTCACAACTTCCC 164755 ||||| ||| | || || ||| ||||||| Sbjct 504 ATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 147 bits (162), Expect = 2e-30 Identities = 284/416 (68%), Gaps = 5/416 (1%) Strand=Plus/Minus Query 164354 TGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACTTCTTCGCTGGTTCGTGA 164413 ||| || ||||| |||||||| ||||| || || |||| ||||| || || || || Sbjct 709 TGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGA 651 Query 164414 AACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTTGGTCAAGAAGAAGAAACATA 164473 || | | || | || | || | || || | || || || || || || ||||| Sbjct 650 GACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATA 591 Query 164474 CAACATTGTTGCCGCTCACGGTTACTTTGGTCGTCTGATCTTCCAATACGCTTCATTCAA 164533 | ||| || || || || ||||||||| | || || |||||||||| | || || Sbjct 590 TAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAA 531 Query 164534 CAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGCATCTGGTTCAC 164593 |||||| | | ||||||||||| || |||||||| || | || || |||||||| Sbjct 530 CAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCAC 471 Query 164594 CGCACTTGGTGTTTCCACGATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCAT 164653 | | || || || || || ||| | || ||| | || || | |||||||| | || | Sbjct 470 CTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACT 411 Query 164654 CATCGATGGTCAG--GGTCGTGTGCTCAACACTTGGGCAGACGTTCTCAACCGCGCTGGT 164711 | || |||| |||| | | | ||||| ||||| ||| | || || | || | Sbjct 410 TGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGAC 353 Query 164712 CTGGGTATGGAAGTTATGCACGAGCGTAACGCTCACAACTTCCCTCTGGATCTCGC 164767 || ||||||||||| ||||| ||| | || || ||| ||||||| || ||||| || Sbjct 352 CTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq305 Length=10442 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 15010 ATTGGGAGATTAGCTCAGCGGTAGAGCTATTCGTTTACACCGAATCGGTCACTGGTTCGA 15069 || ||| |||||||||||||||||||| |||||| ||| |||| |||||||||||||| Sbjct 2527 ATAGGGTGATTAGCTCAGCGGTAGAGCACTTCGTTGACATCGAAGGGGTCACTGGTTCGA 2586 Query 15070 TTCCAGTATCTCCCA 15084 | |||||||| |||| Sbjct 2587 TCCCAGTATCGCCCA 2601 >seq6435 Length=1119 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 15013 GGGAGATTAGCTCAGCGGTAGAGCTATTCGTTTACACCGAATCGGTCACTGGTTCGATTC 15072 ||| |||||||||||||||||||| |||||| |||||||| ||||||| ||||||| | Sbjct 398 GGGCGATTAGCTCAGCGGTAGAGCACTTCGTTCACACCGAAGGGGTCACTAGTTCGATCC 339 Query 15073 CAGTATCTCCCA 15084 |||||| |||| Sbjct 338 TAGTATCGCCCA 327 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556809398219880