Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq9616 370 1e-97 seq15666 309 4e-79 seq8042 302 5e-77 seq10300 248 1e-60 seq9663 89.7 6e-13 seq14097 86.0 7e-12 seq15657 84.2 3e-11 seq2209 82.4 9e-11 >seq9616 Length=845 Score = 370 bits (410), Expect = 1e-97 Identities = 397/525 (76%), Gaps = 0/525 (0%) Strand=Plus/Plus Query 172278 TGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGA 172337 ||||||||||||||||||||| || || |||||||||||||| || ||||||||||| Sbjct 25 TGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGA 84 Query 172338 GCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATC 172397 || | |||| |||||||||| |||||||| ||||||||||| | || |||||||| Sbjct 85 ACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATC 144 Query 172398 TTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGA 172457 | ||||| || ||||| || || || || || || |||||| | ||||||| || Sbjct 145 TCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACACTTGG 204 Query 172458 AGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGT 172517 | | | |||| || | || || | |||||||| | || || ||||| | |||| Sbjct 205 ATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATATC 264 Query 172518 AGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAAG 172577 ||||||||| || ||||||||| | || || |||||||| | || ||||||||||| Sbjct 265 AGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTTAACAACTCAAG 324 Query 172578 AAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGGG 172637 ||| | |||||||||||||||| | || || || || ||||||| |||||| | || Sbjct 325 AAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAGG 384 Query 172638 TATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATGC 172697 | | ||||||||| || ||| | || ||| | ||||||||| ||||| ||||||| | Sbjct 385 AGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGACTC 444 Query 172698 TAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGGA 172757 | ||| | | || ||||||| ||| | ||||| |||||| ||||||||||||| Sbjct 445 AGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGA 504 Query 172758 AGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGC 172802 ||| |||||||| || |||||||||||||||||| |||| || || Sbjct 505 AGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTAGC 549 >seq15666 Length=534 Score = 309 bits (342), Expect = 4e-79 Identities = 379/515 (74%), Gaps = 3/515 (1%) Strand=Plus/Plus Query 172278 TGATGGTATGCCACTAGGTATCTCAGGTACGTTCAACTTT-ATGTTCGTGTTCCAAGCAG 172336 ||||||||||||||||||||| || || ||||||||| ||||| || |||||||||| Sbjct 21 TGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAG 80 Query 172337 AGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGAT 172396 | || |||||| ||||||| || |||||||| ||||||||||| | |||||||||| Sbjct 81 AACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGAT 140 Query 172397 CTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTG 172456 || ||||| || ||||| || || || || || || |||||| | ||||||| || Sbjct 141 CTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGACACTTG 200 Query 172457 AAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAG 172516 | | | |||| || | || || | | | ||| || || || ||||| | |||| Sbjct 201 GATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCATAT 260 Query 172517 TAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAACAACTCAA 172576 ||||||||| || ||||||||| | | || |||||||| | | || |||||||||| Sbjct 261 CAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTCAA 320 Query 172577 GAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAACCTCTATGG 172636 |||| || |||||||||||||||| | || || || || ||||||| |||||| | | Sbjct 321 GAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAG 380 Query 172637 GTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGTTGTAGATG 172696 | | ||| ||||| || ||| | || | | | |||| ||||| ||||||| Sbjct 381 GAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTAGACT 438 Query 172697 CTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCTAGGTATGG 172756 | | | | | | || ||||||| ||| | ||||| |||||| |||||||||||| Sbjct 439 CAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGG 498 Query 172757 AAGTTATGCATGAAAGAAATGCACACAACTTCCCA 172791 |||| |||||||| || ||||||||| |||||||| Sbjct 499 AAGTAATGCATGAGAGGAATGCACACGACTTCCCA 533 >seq8042 Length=962 Score = 302 bits (334), Expect = 5e-77 Identities = 610/903 (68%), Gaps = 24/903 (3%) Strand=Plus/Minus Query 173086 ACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTTTAACAGCAGCAGTCTCC 173145 ||||||||| | ||| ||||| | |||||| |||||||||||||||||||| | Sbjct 935 ACACATGGTTTGGCAAGCTCATACTTAGAAGGATGTAACTTTTTAACAGCAGCAGTTAGC 876 Query 173146 ACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGGGACCTGAAGCACAAGGT 173205 ||||| | | ||||| ||| ||| || | | |||||||| |||||||||||| Sbjct 875 ACACCAGCTAATAGCATGGGACATTCTCTACTACTATTGTGGGGACCAGAAGCACAAGGT 816 Query 173206 TCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTGTAGCATTACATGGAGTC 173265 | || | | || || | || |||||| ||| | | || || | || Sbjct 815 TATTTTACAAGATGAACACTTATGGGCTCTTTATGGACCTTCATTACTTTTCACTCAATC 756 Query 173266 TTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAGGACTTGTAGGCATCAGA 173325 |||| | | ||||| || | | ||||||||||| || | | || | || | Sbjct 755 TTTGCAGTTATAGGCTTTTGTTTAAGGCAGTTTGAGATAGCCAGCTTAGTCAGTATACGT 696 Query 173326 CCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCACTAGCA-TCTTTTTAAT 173384 || ||||| || || || ||| | | ||| | | | || || || | || | || Sbjct 695 CCGTACAATGCTCTAGCCTTCACAGGCCCTATAATACTATACA-TATCAGTGTTCGTCAT 637 Query 173385 CTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCGGTGTCGCAGCAATCTT 173444 ||||| |||| || | ||||||||| |||||| | || || ||||| ||||| Sbjct 636 TTACCCTTTAGGTCAATCCTCTTGGTTCTTTGCACCTAGCTATGGAGTTGCAGCCATCTT 577 Query 173445 TCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGAATCCATTTCACATGAT 173504 | | || ||||| ||||||| || ||||| || | || ||||| || ||||| Sbjct 576 CAGGTTCCTCCTATTCCTACAAGGCTTTCACAATTGGACTCTAAACCCATTCCATATGAT 517 Query 173505 GGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTCATGGTGCAACAGTGCA 173564 ||| | |||||||| | || | ||| | ||| || || |||||||| ||||| Sbjct 516 GGGAATAGCAGGAATCTTGGGAGCAGCTCTTTTATCAGCTATACATGGTGCCACAGTAGT 457 Query 173565 GAACACATTGTATGAAGACACATCACAATATACTGAAGGTAAGATTCAATCCACAACTTT 173624 ||||| | ||| |||| || | ||| || |||||| || Sbjct 456 TAACACTATATATCAAGA---------------TG--GTCAAGCTTA----CACAACCTT 418 Query 173625 CAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACAGCGAACAGATT 173684 |||| |||| ||| || || || || ||||| |||| | ||||| || ||||| Sbjct 417 CAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAACAGCTAATAGATT 358 Query 173685 CTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACTTCCTCATGTT 173744 |||||| || || | || | |||||||| || || |||| | |||||| || | | Sbjct 357 CTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTCACTTCTTCCTACT 298 Query 173745 GTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTCTTGCACTTAA 173804 || ||||| || || |||||||| || || ||||| || |||| || ||| | || Sbjct 297 ATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAGGACTAGCATTCAA 238 Query 173805 CCTTAGAGCATACGACTTTGTATCTCAAGAGATAAGAGCAGCAGAAGATCCAGAGTTCGA 173864 |||||||||||| |||||| ||||||| ||| ||| || ||||| || |||||||| || Sbjct 237 CCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAGAGGACCCAGAGTTTGA 179 Query 173865 GACTTTCTACACTAAGAATATACTTCTTAATGAAGGTATGAGAGCATGGATGTCATCTGT 173924 ||| ||||| |||||||| ||||| |||||||||||||| | ||||||| || Sbjct 178 GACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTATGGATGGCAGTCCA 119 Query 173925 AGATCAACCACATGAGAACTTCGTATTTCCAGAAGAAGTGTTACCAAGAGGTAACGCACT 173984 ||| ||||| |||||||||||| ||| || || ||||| | |||||||| ||| |||| Sbjct 118 AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAAGAGGCAACTCACT 59 Query 173985 TTA 173987 || Sbjct 58 ATA 56 >seq10300 Length=803 Score = 248 bits (274), Expect = 1e-60 Identities = 304/414 (73%), Gaps = 1/414 (0%) Strand=Plus/Minus Query 172389 TGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGAGA 172448 |||||||||| ||||| || ||||| || || || || || || || ||| | || Sbjct 709 TGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGA 651 Query 172449 GACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACATA 172508 |||| || | | | |||| || | || || | |||||||| || || || ||||| Sbjct 650 GACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATA 591 Query 172509 CAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTCAA 172568 | |||| ||||||||| || ||||||||| | || || ||||| || | | || || Sbjct 590 TAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAA 531 Query 172569 CAACTCAAGAAGTCTTCACTTCTTCCTAGCAGTTTTCCCTGTTGTATGTGTATGGTTAAC 172628 ||||||||||||||| |||||||||||||||| | || || || || ||||||| || Sbjct 530 CAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCAC 471 Query 172629 CTCTATGGGTATCTGTACAATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCAGT 172688 |||| | || | | ||||||| | || ||| | || || | |||||||| ||||| | Sbjct 470 CTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACT 411 Query 172689 TGTAGATGCTAACGGTAAGATTGTTCCTACATGGGGTGACGTTCTTAACAGAGCAAACCT 172748 |||||| | | ||| | | || ||||||| ||| | ||||| |||||| |||| Sbjct 410 TGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCT 351 Query 172749 AGGTATGGAAGTTATGCATGAAAGAAATGCACACAACTTCCCATTAGACCTTGC 172802 |||||||||||| |||||||| || ||||||||| |||||||| |||| || || Sbjct 350 AGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq9663 Length=843 Score = 89.7 bits (98), Expect = 6e-13 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 172227 AGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTAT 172286 |||||||| || || ||| |||| || || | || || || ||| ||||||||| Sbjct 207 AGCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTAT 266 Query 172287 GCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACAT 172346 |||||||||||| || || || ||||||| |||||| | |||||| || || ||||| Sbjct 267 GCCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACAT 326 Query 172347 TCTAATGCATCCTTTCCAC 172365 || |||| || |||||| Sbjct 327 GCTCGTGCACCCATTCCAC 345 >seq14097 Length=611 Score = 86.0 bits (94), Expect = 7e-12 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 171922 GCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT 171981 ||||||||| ||||||||| || || || || | |||||||||||| || || || Sbjct 70 GCATTCATTCTAGCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGC 129 Query 171982 TTCTTATATGGTAACAACATC--ATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAG 172039 || ||||||||||||||||| || | || ||||| | ||| || || || |||| Sbjct 130 CTCCTATATGGTAACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAG 189 Query 172040 GTCTCCACTTCTACCCTATCTGGGAAGCA 172068 | | ||||| || || | ||||||||| Sbjct 190 GAGTTCACTTTTATCCAGTATGGGAAGCA 218 Score = 86.0 bits (94), Expect = 7e-12 Identities = 109/149 (73%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 171922 GCATTCATTGCAGCACCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCT 171981 ||||||||| ||||||||| || || || || | |||||||||||| || || || Sbjct 416 GCATTCATTCTAGCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGC 475 Query 171982 TTCTTATATGGTAACAACATC--ATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAG 172039 || ||||||||||||||||| || | || ||||| | ||| || || || |||| Sbjct 476 CTCCTATATGGTAACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAG 535 Query 172040 GTCTCCACTTCTACCCTATCTGGGAAGCA 172068 | | ||||| || || | ||||||||| Sbjct 536 GAGTTCACTTTTATCCAGTATGGGAAGCA 564 >seq15657 Length=537 Score = 84.2 bits (92), Expect = 3e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 172227 AGCAGCATTTGCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTAT 172286 |||||||| || || ||| |||| || || | || || || ||| ||||||||| Sbjct 22 AGCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTAT 81 Query 172287 GCCACTAGGTATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCA 172340 |||||||||||| || || |||||||||||||| || ||||||||||| || Sbjct 82 GCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAACA 135 >seq2209 Length=2381 Score = 82.4 bits (90), Expect = 9e-11 Identities = 178/261 (68%), Gaps = 4/261 (2%) Strand=Plus/Minus Query 159546 TATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACAT-CAGACAGATAT 159604 ||||||| | || || || ||||| || |||||||||||| || ||| ||| || | | Sbjct 1897 TATTATGGTCACTTACCCGTCTACTCACGGTGTATTTGAAGAAAGCATTCAGG-AGCTGT 1839 Query 159605 GTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCAC 159664 | | || || || | ||||| ||||| ||| | || || || ||| | ||||| | Sbjct 1838 GCGACATCGTCCACTCATACGGTGGCCAGGTGTATATGGACGGCGCCAATATGAATGCTC 1779 Query 159665 AGGTAGGTCTAGCAAAACCATGTGACTAT-GGTGCAGATGTATGTCATCTAAACTTACAT 159723 |||| || || | ||| | ||| ||| |||| |||| || ||||| | || Sbjct 1778 AGGTTGGCTTAACCTCGCCAGGCTT-TATCGGTTCAGACGTATCGCACTTAAACCTGCAC 1720 Query 159724 AAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGTAGCA 159783 || || ||||||||||| || || || || || || || | || ||||| || || | Sbjct 1719 AAAACCTTCTGTATTCCGCACGGCGGCGGTGGCCCGGGTATGGGCCCTATCGGCGTGAAA 1660 Query 159784 AAACATCTCACACCATTTGTA 159804 | ||| | |||||||| || Sbjct 1659 AGCCATTTAGCACCATTTTTA 1639 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587929348440720