Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq9616 264 1e-65 seq8042 251 8e-62 seq15666 192 7e-44 seq10300 159 4e-34 >seq9616 Length=845 Score = 264 bits (292), Expect = 1e-65 Identities = 389/546 (71%), Gaps = 6/546 (1%) Strand=Plus/Plus Query 162826 GGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTACATG 162885 || ||||| |||| ||| | ||||| | ||||| ||||| || ||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 162886 CTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCA 162945 | || ||||||||||| |||| |||| | |||||||| |||||||| || || || ||| Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 162946 GGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTC 163005 | ||| ||||| || || || |||||||| ||||| || || ||||| || || || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 163006 GTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 163065 | ||||| || | || | |||| || | || || | ||||| || | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 163066 GAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATA-TGC 163124 |||||||| | ||| ||||| ||||| ||||| ||| | | || ||||| || | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 163125 ATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCAT 163184 | | || |||||||| | | | ||||||||||| || |||||||| || | || || Sbjct 308 AGC-TTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 366 Query 163185 CTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAA 163244 ||||||||| | || || || || || ||||| || ||| | || ||| | |||||||| Sbjct 367 ATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAA 426 Query 163245 CCAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAAC 163302 | | || | | || |||| |||| | | | ||||| ||||| ||| | || || Sbjct 427 CGAATCACTTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAAT 484 Query 163303 CGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCCACTTGAC 163362 | |||| | ||||||||||| ||||| ||| | ||||| |||||||||||||| || Sbjct 485 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGAT 544 Query 163363 CTGGCA 163368 || ||| Sbjct 545 CTAGCA 550 >seq8042 Length=962 Score = 251 bits (278), Expect = 8e-62 Identities = 410/584 (70%), Gaps = 15/584 (3%) Strand=Plus/Minus Query 164051 TCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTGGAGTGGCAGCAA 164110 |||| |||||| | |||||||| ||||||||| || || | |||||| ||||| | Sbjct 640 TCATTTACCCTTTAGGTCAATCCTCTTGGTTCTTTGCACCTAGCTATGGAGTTGCAGCCA 581 Query 164111 TCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGAACCCCTTCCATA 164170 ||||||| |||||| ||||||| ||||| ||||| || |||||| | ||||| ||||||| Sbjct 580 TCTTCAGGTTCCTCCTATTCCTACAAGGCTTTCACAATTGGACTCTAAACCCATTCCATA 521 Query 164171 TGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTCACGGAGTCACAG 164230 |||||||| | || || || | || | ||| | |||| ||||| || || | ||||| Sbjct 520 TGATGGGAATAGCAGGAATCTTGGGAGCAGCTCTTTTATCAGCTATACATGGTGCCACAG 461 Query 164231 TTGAAAATACATTGTATGAAGATGGAGAACAAGCAAAC---ACCTTTAAGGCGTTTGATT 164287 | | || || | ||| ||||||| ||||| || ||||| | | || | Sbjct 460 TAGTTAACACTATATATCAAGATGG---TCAAGCTTACACAACCTTCAGATCATTCTCTC 404 Query 164288 CGACACAGGAAGAAGAGACTTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCT 164347 | || || || |||||||| |||||| | || || || | |||||||| || | Sbjct 403 CAACGCAACCTGAGGAGACTTACTCTATGCTAACAGCTAATAGATTCTGGTCTCAAGTAC 344 Query 164348 TCGGTGTTGCGTTTTCTAACAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTA 164407 |||| || || ||||| || ||| | |||||||| || ||| | | || || || || Sbjct 343 TCGGAGTAGCATTTTCCAATAAGAGATGGCTTCACTTCTTCCTACTATTAGTACCAGTAG 284 Query 164408 TGGGTCTATGGACATCCTCTATTGGCATTATTGGCCTTGCTCTCAATCTTCGTGCTTACG 164467 || | ||||| || ||||| || || || || || || |||| ||| | || || | Sbjct 283 CAGGAATGTGGACCTCTTCTATAGGAATAATAGGACTAGCATTCAACCTTAGAGCATATG 224 Query 164468 ATTTTGTAAGTCAAGAGATTAGAGCAGCAGAAGATCCTGAGTTCGAGACTTTCTATACCA 164527 | ||| || ||| ||| | | || ||||| || || ||||| ||||| |||||||| | Sbjct 223 ACTTTATATCTCAGGAG-TAAAGGCTGCAGAGGACCCAGAGTTTGAGACATTCTATACTA 165 Query 164528 AGAACATCTTATTGAACGAAGGACTCCGTGCATGGTTAGCA--CCAGTTGACCAGC--CA 164583 ||||||| || | || ||||| ||||| |||| | ||| ||| || || | || Sbjct 164 AGAACATACTACTTAATGAAGGTATCCGTTTATGGATGGCAGTCCA--AGAACAACCTCA 107 Query 164584 GGAGAACGGTTTGTCTTCCCAGAAGAAGTACTGCCGAGAGGTAA 164627 |||||| || ||||| || |||||||| || ||||| || Sbjct 106 TGAGAAC--TTCCAATTCCCTGAGGAAGTACTTCCAAGAGGCAA 65 >seq15666 Length=534 Score = 192 bits (212), Expect = 7e-44 Identities = 366/535 (68%), Gaps = 7/535 (1%) Strand=Plus/Plus Query 162826 GGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTACATTCAACTAC-AT 162884 || ||||| |||| ||| | ||||| | ||||| ||||| || ||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 162885 GCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGC 162944 | | || ||||||||||| ||||||||| | ||||| || |||||||| || || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 162945 AGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACT 163004 || ||| || || || || || |||||||| ||||| || || ||||| || || || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 163005 CGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGA 163064 | ||||| || | || | |||| || | || || | | | || || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 163065 AGAGACATACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGC 163124 |||||||| | ||| ||||| ||||| ||||| ||| | || ||||| || | Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 163125 ATCATTCAACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCAT 163184 || |||||||| | | | ||||||||||| || |||||||| || | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 163185 CTGGTTCACCGCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAA 163244 ||||||||| | || || | || || ||||| || ||| | || | | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 163245 CCAGTCCATCCTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAAC 163302 | || | | || |||| | || | | | ||||| ||||| ||| | || || Sbjct 422 TGAATCACTTGTAGA--CTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAAT 479 Query 163303 CGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCCAC 163357 | |||| | ||||||||||| ||||| ||| | ||||| ||| ||||||||| Sbjct 480 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 159 bits (176), Expect = 4e-34 Identities = 287/416 (69%), Gaps = 5/416 (1%) Strand=Plus/Minus Query 162955 GGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAG 163014 || || || || |||||||| ||||| || || ||||| || || || | | || ||| Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCG-GAG 650 Query 163015 ACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACATAC 163074 || || | || | |||| || | || || | ||||| || || || |||||||| Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 163075 AACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTCAAC 163134 | ||| ||||| ||||| ||||| ||| | | || |||||||| | || ||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 163135 AACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTCACC 163194 ||||| | | ||||||||||| || |||||||| || | || || ||||||||| Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 163195 GCCCTTGGCGTGTCAACCATGGCATTCAACCTGAACGGTTTCAACTTCAACCAGTCCATC 163254 | || || || || || ||| | || ||| | || || | |||||||| | || | Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 163255 CTTGATGGTCAG--GGTCGTGTGTTGAACACCTGGGCAGACGTTCTGAACCGTGCAGGTT 163312 | || |||| |||| | | | ||||| ||||| ||| | || || | |||| Sbjct 409 GTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACC 352 Query 163313 TGGGTATGGAAGTTATGCACGAGCGCAATGCTCACAACTTCCCACTTGACCTGGCA 163368 | ||||||||||| ||||| ||| | ||||| ||| |||||||||| || || ||| Sbjct 351 TAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGCA 296 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557468461625400