Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq8042 309 3e-79 seq9616 143 3e-29 seq15666 136 4e-27 seq10300 96.9 4e-15 seq14149 82.4 9e-11 seq14097 82.4 9e-11 seq6053 82.4 9e-11 seq1552 82.4 9e-11 >seq8042 Length=962 Score = 309 bits (342), Expect = 3e-79 Identities = 623/909 (69%), Gaps = 39/909 (4%) Strand=Plus/Minus Query 168600 TTCGTCACGAGTTGGTATACTCACGGGTTGGCAAGTTCCTATCTGGAGGGCGCAAACTTT 168659 || ||||| |||||| || || || |||||||| || || | || || |||||| Sbjct 953 TTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGATGTAACTTT 894 Query 168660 CTTACTGCGGCAGTTAGTACTCCAGCAGATTCTATGGGTCATTCTCTTCTGCTTCTCTGG 168719 | || || |||||||| || ||||| || ||||| |||||||| || || | ||| Sbjct 893 TTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTACTATTGTGG 834 Query 168720 GGTCCTGAGGCACAAGGGGATTTCGTCAGATGGTGTCAACTTGGAGGACTC-TGGGCT-T 168777 || || || |||||||| |||| ||||| ||| ||| |||||| | Sbjct 833 GGACCAGAAGCACAAGGTTATTTTACAAGATG-----AAC-------ACTTATGGGCTCT 786 Query 168778 TTGTGGCGCTCCACGGGGCTTTCGCTCTAATCG-----GTTTCATGCTTC-------GTC 168825 || ||| || || |||| ||| |||| ||| | |||| | | Sbjct 785 TTATGGACCTTCATTACT-TTTCACTC-AATCTTTGCAGTTATAGGCTTTTGTTTAAGGC 728 Query 168826 AGTTTGAACTGGCACGTCTCATCGGTATCCGTCCCTACAATGCTATTGCGTTCTCTGGTC 168885 ||||||| | || | | || |||| ||||| ||||||||| | || ||| | || | Sbjct 727 AGTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGCC 668 Query 168886 CTATCGCTGTTTTTGTTAGC-GTCTTTCTCATCTACCCTCTGGGTCAATCGAGTTGGTTT 168944 |||| | | | || | || || |||| |||||| | |||||||| |||||| Sbjct 667 CTATAA-TACTATACATATCAGTGTTCGTCATTTACCCTTTAGGTCAATCCTCTTGGTTC 609 Query 168945 TTCGCTCC-ATCTTTCGGGGTCTCAGCAATCTTCCGATTCCTTCTCTTCCTACAAGGATT 169003 || || || | || | || || |||| |||||| | ||||| || ||||||||||| || Sbjct 608 TTTGCACCTAGCTAT-GGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTT 550 Query 169004 CCATAACTGGACACTGAATCCATTTCATATGATGGGTGTAGCAGGTATTTTGGGAGGAGC 169063 || || ||||| || || ||||| ||||||||||| ||||||| || ||||||| ||| Sbjct 549 TCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGC 490 Query 169064 CTTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACTCTGTATCAAGATGGTGAA-C 169122 | | || || || ||||||| ||||||| || ||| | |||||||||||| || | Sbjct 489 TCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGTCAAGC 430 Query 169123 AAGCAAATACTTTCAAAGCATTTGACAGCACTCAGGAAGAGGAGACCTATTCAATGGTTA 169182 || | || |||| | |||| || || |||||||| || || ||| | | Sbjct 429 TTACACA-ACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAA 371 Query 169183 CTGCAAACCGTTTCTGGTCTCAGATCTTTGGTATTGCGTTCAGTAATAAGAGGTGGTTGC 169242 | || || | ||||||||||| | | || | || || |||||||| ||| | | Sbjct 370 CAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTC 311 Query 169243 ATTTCTTTATGCTGTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCATCGGTATTATTG 169302 | ||||| | || || || || || || | ||||| ||| || || || || | Sbjct 310 ACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAG 251 Query 169303 GTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTTTCCCAAGAGATCAGAGCAGCAGAAG 169362 | || || |||||||| | || ||||||||| | || || ||| | | || ||||| | Sbjct 250 GACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAGAGG 192 Query 169363 ATCCAGAGTTTGAGACGTTCTACACCAAGAACATCCTCTTGAACGAAGGTCTTCGTGCAT 169422 | |||||||||||||| ||||| || |||||||| || | || |||||| | ||| || Sbjct 191 ACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTAT 132 Query 169423 GGTTAGCA--CCTATTGATCAACCTCATGAGAACTTTGTGTTCCCTGAGGAAGTACTTCC 169480 || | ||| || | || ||||||||||||||||| |||||||||||||||||||| Sbjct 131 GGATGGCAGTCCAA--GAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCC 74 Query 169481 CCGAGGTAA 169489 |||| || Sbjct 73 AAGAGGCAA 65 >seq9616 Length=845 Score = 143 bits (158), Expect = 3e-29 Identities = 250/364 (69%), Gaps = 0/364 (0%) Strand=Plus/Plus Query 167529 GGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTACATG 167588 || ||||| |||| ||| | ||||| || ||||| ||| || ||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 167589 CTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGCT 167648 | || ||||||||||| |||| ||| | ||||| || ||||| || | || || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 167649 GGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTG 167708 | || ||||| || ||||| |||||||| ||||| || || |||| || || || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 167709 GTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAA 167768 || || || | | || | || | || | || || | ||||| ||| | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 167769 GAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCA 167828 ||||| |||| ||| || || ||||| ||||| ||| | || || ||||| ||| Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 167829 TCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATC 167888 ||| |||||||| | | ||||||||| | ||||||||||| || | ||||| Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 167889 TGGT 167892 |||| Sbjct 368 TGGT 371 >seq15666 Length=534 Score = 136 bits (150), Expect = 4e-27 Identities = 250/365 (68%), Gaps = 1/365 (0%) Strand=Plus/Plus Query 167529 GGTCAAGGTTCTTTCTCTGACGCGATGCCTCTTGGTATCTCTGGTACATTCAACTAC-AT 167587 || ||||| |||| ||| | ||||| || ||||| ||| || ||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 167588 GCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGCTCGGCGTTGC 167647 | | || ||||||||||| |||||||| | |||||||| ||||| || | || || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 167648 TGGCGTATTCGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCT 167707 | || || || || ||||| |||||||| ||||| || || |||| || || || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 167708 GGTTCGTGAAACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGA 167767 || || || | | || | || | || | || || | | | ||||| || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 167768 AGAGACGTATAACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGC 167827 ||||| |||| ||| || || ||||| ||||| ||| | | || ||||| |||| Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 167828 ATCCTTCAACAACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTAT 167887 ||| |||||||| | || ||||||||| | ||||||||||| || | ||||| Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 167888 CTGGT 167892 |||| Sbjct 364 ATGGT 368 >seq10300 Length=803 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/235 (69%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 167658 GGCGGTTCTCTGTTCAGTGCAATGCACGGTTCTCTGGTTACCTCTTCGCTGGTTCGTGAA 167717 || || ||||| |||||||| ||||| || || |||| || || || || || || Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGAG 650 Query 167718 ACCACCGAAACTGAGTCCCAGAACTATGGTTACAAGTTCGGTCAGGAAGAAGAGACGTAT 167777 || | | || | || | || | || || | ||||| ||||| || ||||| ||| Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 167778 AACATCGTCGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAAC 167837 | ||| || || ||||| ||||| ||| | || || |||||||||| ||| ||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 167838 AACTCCCGCTCGCTGCACTTCTTCTTGGCAGCATGGCCTGTTGTTGGTATCTGGT 167892 ||||| | || ||||||||| | ||||||||||| || | ||||| |||| Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGT 475 >seq14149 Length=608 Score = 82.4 bits (90), Expect = 9e-11 Identities = 67/80 (84%), Gaps = 1/80 (1%) Strand=Plus/Plus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||| ||||||||| ||| |||||||||| |||||| ||||| ||||||||||||| Sbjct 337 TGGGGCCTTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGGAGTTCGAT 396 Query 22535 TCTCCTATTCTCCACTCAAT 22554 |||||| |||||| |||| Sbjct 397 CCTCCTAGGCTCCAC-CAAT 415 >seq14097 Length=611 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 167202 GCTCCTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGT 167261 || ||||| || ||||| |||| ||| | ||||| || || || ||| | |||||| Sbjct 82 GCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGCCTCCTATATGGT 141 Query 167262 AACAACATC--ATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCT 167319 ||||||||| || | || ||||| | || |||||||||||| || ||||||| | Sbjct 142 AACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAGGAGTTCACTTTT 201 Query 167320 ATCCCATCTGGGAAGCA 167336 |||| | ||||||||| Sbjct 202 ATCCAGTATGGGAAGCA 218 Score = 82.4 bits (90), Expect = 9e-11 Identities = 101/137 (74%), Gaps = 2/137 (1%) Strand=Plus/Plus Query 167202 GCTCCTCCTGTGGACATCGATGGTATCCGCGAACCAGTTGCTGGTTCACTCATGTATGGT 167261 || ||||| || ||||| |||| ||| | ||||| || || || ||| | |||||| Sbjct 428 GCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGCCTCCTATATGGT 487 Query 167262 AACAACATC--ATCTCTGGTGCAGTTGTTCCTTCTTCTAATGCTATTGGTCTTCACTTCT 167319 ||||||||| || | || ||||| | || |||||||||||| || ||||||| | Sbjct 488 AACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAGGAGTTCACTTTT 547 Query 167320 ATCCCATCTGGGAAGCA 167336 |||| | ||||||||| Sbjct 548 ATCCAGTATGGGAAGCA 564 >seq6053 Length=1168 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||| ||||||||| ||| |||||||||| |||||| ||||| ||||||||||||| Sbjct 940 TGGGGCCTTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGGAGTTCGAT 881 Query 22535 TCTCCTATTCTCCAC 22549 |||||| |||||| Sbjct 880 CCTCCTAGGCTCCAC 866 >seq1552 Length=3150 Score = 82.4 bits (90), Expect = 9e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||| ||||||||| ||| |||||||||| |||||| ||||| ||||||||||||| Sbjct 2910 TGGGGCCTTAGCTCAGCTGGGAGAGCGCCTGATTTGCATTCAGGAGGTCAGGAGTTCGAT 2851 Query 22535 TCTCCTATTCTCCAC 22549 |||||| |||||| Sbjct 2850 CCTCCTAGGCTCCAC 2836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560491835014800