Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq9616 291 1e-73 seq15666 233 3e-56 seq10300 190 3e-43 seq9663 84.2 3e-11 >seq9616 Length=845 Score = 291 bits (322), Expect = 1e-73 Identities = 384/527 (73%), Gaps = 4/527 (1%) Strand=Plus/Plus Query 215746 TTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCA 215805 |||| ||||| ||||||||| || || |||||| ||||||| ||||| || ||||| Sbjct 19 TTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCA 78 Query 215806 GGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGG 215865 || || |||| |||| | ||||| ||||||||||| ||||| || || | ||| ||||| Sbjct 79 AGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGG 138 Query 215866 TGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGAC 215925 || || | ||| ||| ||||| || ||| | || || || |||||| | |||||| Sbjct 139 AGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGAC 198 Query 215926 AACTG-AGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACA 215984 | || | | | | || | || | || || | |||||||| |||| || ||||| | Sbjct 199 ACTTGGATCTA-ACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATA 257 Query 215985 ACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATAC-GCATCTTTCAAC 216043 ||| ||| ||||| || ||||||||| | || || ||||| ||| | | |||| ||| Sbjct 258 GCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTT-AAC 316 Query 216044 AACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAACT 216103 ||||||||||| | ||||||||||| ||||||| || || || |||| ||| || Sbjct 317 AACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 376 Query 216104 GCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGTC 216163 | | || || || || ||||| || ||| | || ||| | ||||||||| | || | Sbjct 377 TCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTT 436 Query 216164 GTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACTT 216223 |||||| || ||| | | ||| || ||||| ||| | ||||| ||||||| || Sbjct 437 GTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTA 496 Query 216224 GGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCATTAGA 216270 ||||||||||||||||| ||| | || || |||||||||||| |||| Sbjct 497 GGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGA 543 >seq15666 Length=534 Score = 233 bits (258), Expect = 3e-56 Identities = 370/523 (71%), Gaps = 7/523 (1%) Strand=Plus/Plus Query 215746 TTTCTCTGATGCTATGCCACTTGGAATCTCTGGAACATTCAACTAC-ATGTTTGTTTTCC 215804 |||| ||||| ||||||||| || || |||||| ||||||| ||||| || |||| Sbjct 15 TTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCC 74 Query 215805 AGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCG 215864 | || || ||||||||| | ||||||||||||||||| ||||| || || | ||| || | Sbjct 75 AAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTG 134 Query 215865 GTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGA 215924 | || || | ||| ||| ||||| || ||| | || || || |||||| | ||||| Sbjct 135 GAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGA 194 Query 215925 CAACT-GAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATAC 215983 || | || | | | || | || | || || | | | ||| ||||| || ||||| Sbjct 195 CACTTGGATCTA-ACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATAT 253 Query 215984 AACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATAC-GCATCTTTCAA 216042 | ||| ||| ||||| || ||||||||| | | || ||||| ||| | | |||| || Sbjct 254 AGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTT-AA 312 Query 216043 CAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGGGCAAC 216102 |||||||||||| || ||||||||||| ||||||| || || || |||| ||| || Sbjct 313 CAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCAC 372 Query 216103 TGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAACGGTTTCAACTTCAACCAGTCTGT 216162 | | || | || || ||||| || ||| | || | | | |||| | || | Sbjct 373 CTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACT 430 Query 216163 CGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGCAGACGTTCTTAACAGAGCAGGACT 216222 |||||| || | | | | ||| || ||||| ||| | ||||| ||||||| || Sbjct 431 TGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCT 490 Query 216223 TGGTATGGAAGTAATGCACGAGCGTAACGCTCACAACTTCCCA 216265 ||||||||||||||||| ||| | || || ||| |||||||| Sbjct 491 AGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCA 533 >seq10300 Length=803 Score = 190 bits (210), Expect = 3e-43 Identities = 231/312 (74%), Gaps = 2/312 (1%) Strand=Plus/Minus Query 215960 TTCGGACAAGAGGAGGAAACATACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTC 216019 |||||||| ||||| || ||||| | ||| ||| ||||| || ||||||||| | || Sbjct 613 TTCGGACAGGAGGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTA 554 Query 216020 ATCTTCCAATACGC-ATCTTTCAACAACTCAAGAAGTCTTCACTTCTTCCTTGCAGCATT 216078 || |||||||||| | |||| ||||||||||||||||| ||||||||||| ||||||| Sbjct 553 ATATTCCAATACGGTAGCTTT-AACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATG 495 Query 216079 CCCTGTTATTTGTATCTGGGCAACTGCAATGGGTGTCTCAACTATGGCGTTCAACCTTAA 216138 || || || |||| ||| || | | || || || || ||| | || ||| | || Sbjct 494 GCCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAA 435 Query 216139 CGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGGGC 216198 || | |||||||| | || | |||||| || ||| | | ||| || ||||| Sbjct 434 TGGCCTGAACTTCAATGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGC 375 Query 216199 AGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCACAA 216258 ||| | ||||| ||||||| || ||||||||||||||||| ||| | || || ||| | Sbjct 374 CGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGA 315 Query 216259 CTTCCCATTAGA 216270 ||||||| |||| Sbjct 314 CTTCCCACTAGA 303 >seq9663 Length=843 Score = 84.2 bits (92), Expect = 3e-11 Identities = 96/129 (74%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 215711 GCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCACTTGGA 215770 ||||||||| |||| || || | || || || |||| ||||| ||||||||| || Sbjct 217 GCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGT 276 Query 215771 ATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTCTGATGCAC 215830 || |||||| || |||| | ||| || | ||| || || |||||||| || ||||| Sbjct 277 ATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACATGCTCGTGCAC 336 Query 215831 CCATTCCAC 215839 ||||||||| Sbjct 337 CCATTCCAC 345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 744927209778960