Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq8042 324 2e-83 seq9616 269 3e-67 seq15666 194 2e-44 seq10300 165 1e-35 >seq8042 Length=962 Score = 324 bits (358), Expect = 2e-83 Identities = 624/910 (69%), Gaps = 23/910 (3%) Strand=Plus/Minus Query 183289 GGCACAGCTTTTGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGGT 183348 |||||| | ||||| || |||||| || ||||| | || || || | ||||| Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 183349 GCTAACTTTCTTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTG 183408 ||||||| | || ||||| || || || ||| | ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 183409 TTACTTTGGGGTCCTGAGTCTCAAGGGGACTTT-CAACGCTGGTGCCAACTTGGGGGACT 183467 || | ||||| || || | ||||| | ||| ||| | || |||| ||| || Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAA----GATGAACACTTATGGG-CT 788 Query 183468 CT----GGAATTTTGTGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTC-GA 183522 || ||| || | | | ||| |||||| | || || || || || | Sbjct 787 CTTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGG 729 Query 183523 CAGTTTGAACTTGCTCGCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGT 183582 |||||||| | || |||| | |||| ||||| ||||||||| | || ||| | || Sbjct 728 CAGTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGC 669 Query 183583 CCTAT--TGCTGTTTTTGTCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGT 183640 ||||| | || | | ||||||| || | || || || | ||||| || || |||| Sbjct 668 CCTATAATACTATACATATCAGTGT--TCGTCATTTACCCTTTAGGTCAATCCTCTTGGT 611 Query 183641 TCTTTGCACCTAGTTTCGGGGTAGCAGCAATCTTTAGATTCCTATTGTTCCTTCAGGGTT 183700 ||||||||||||| | || || ||||| ||||| || ||||| | ||||| || || | Sbjct 610 TCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCT 551 Query 183701 TCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAG 183760 | ||||| ||||| ||||||| ||||||||||||||| | || || || | |||| || Sbjct 550 TTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAG 491 Query 183761 CACTACTCAGTGCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAGATGGAGAAC 183820 | || | ||||| ||||||| |||||||| || || | ||| ||||||| | Sbjct 490 CTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGG---TC 434 Query 183821 AAGCAAACACA---TTCAAGGCATTTGATTCCACTCAAGAAGAAGAGACGTATTCTATGG 183877 |||| ||||| |||| |||| | | || ||| || ||||| || |||||| Sbjct 433 AAGCTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGC 374 Query 183878 TTACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAATAAGCGTTGGT 183937 | ||||| ||| | |||||||| ||| | |||| || || ||| ||||||| | ||| Sbjct 373 TAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGC 314 Query 183938 TGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTCTATTGGCATCA 183997 | |||||||| | | || || || || || | ||| ||||||||| || || | Sbjct 313 TTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAA 254 Query 183998 TTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGTAAGTCAAGAGATCAGAGCAGCAG 184057 | || || || | || ||| | || ||||| ||| || ||| ||| | | || |||| Sbjct 253 TAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAG 195 Query 184058 AAGATCCAGAATTTGAGACGTTCTACACAAAGAACATACTTCTTAATGAAGGACTACGTG 184117 | || ||||| |||||||| ||||| || ||||||||||| ||||||||||| | ||| Sbjct 194 AGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTT 135 Query 184118 CATGGTTAGCACCTTCTGATCAACCACATGAGAATTTTATATTTCCAGAGGAGGTATTAC 184177 |||| | ||| || ||||| |||||||| || ||| || ||||| ||| | | Sbjct 134 TATGGATGGCAGTCCAAGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTC 75 Query 184178 CTAGAGGCAA 184187 | |||||||| Sbjct 74 CAAGAGGCAA 65 >seq9616 Length=845 Score = 269 bits (298), Expect = 3e-67 Identities = 382/529 (72%), Gaps = 10/529 (2%) Strand=Plus/Plus Query 182253 GATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAG 182312 |||| ||||| || || || ||||| ||||||| |||||| || |||||||| || Sbjct 26 GATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGAA 85 Query 182313 CACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCA 182372 |||| |||| | |||||||| |||||||| || || ||||||| ||| ||||| || || Sbjct 86 CACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATCT 145 Query 182373 CTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACT--G 182430 || || ||||| ||||| || || ||||| || || || || | ||||| ||| | Sbjct 146 CTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGAC-ACTTGG 204 Query 182431 AGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCG 182490 | | | | |||| || | || || | ||||| || | || ||||| |||| ||| Sbjct 205 ATCTA-ACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATAT 263 Query 182491 TTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATAC-GCATCATTCAACAACTCC 182549 ||||| ||||| ||||| ||| | | || ||||| ||| | | | || |||||||| Sbjct 264 CAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTT-AACAACTCA 322 Query 182550 CGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTT 182609 | | | ||||||||||| || |||||||| || | || || ||||||||| | || Sbjct 323 AGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTA 382 Query 182610 GGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGAT 182669 || || || || ||||| || ||| | || ||| | ||||||||| | || | | || Sbjct 383 GGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGA- 441 Query 182670 GGTCAG--GGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTA 182727 |||| |||| | | ||||||| ||||| || || | || | || | || |||| Sbjct 442 -CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTA 500 Query 182728 TGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGC 182776 ||||||| ||||||||| | || ||||||||||||||||||||||| || Sbjct 501 TGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTAGC 549 >seq15666 Length=534 Score = 194 bits (214), Expect = 2e-44 Identities = 359/519 (69%), Gaps = 11/519 (2%) Strand=Plus/Plus Query 182253 GATGCAATGCCCCTCGGAATCTCAGGAACATTCAACTAT-ATGTTGGTTTTCCAAGCTGA 182311 |||| ||||| || || || ||||| ||||||| | ||||| || |||||||| || Sbjct 22 GATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAGA 81 Query 182312 GCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTC 182371 ||||||||| | ||||| || |||||||| || || ||||||| ||| || || || || Sbjct 82 ACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGATC 141 Query 182372 ACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACT-- 182429 || || ||||| ||||| || || ||||| || || || || | ||||| ||| Sbjct 142 TCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGAC-ACTTG 200 Query 182430 GAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATC 182489 || | | | |||| || | || || | | | || || || ||||| |||| ||| Sbjct 201 GATCTA-ACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCATA 259 Query 182490 GTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTCAACAACTCC 182549 ||||| ||||| ||||| ||| | || ||||| |||| || |||||||| Sbjct 260 TCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTCA 319 Query 182550 CGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCACCGCACTT 182609 | | | ||||||||||| || |||||||| || | || || ||||||||| | || Sbjct 320 AGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTA 379 Query 182610 GGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCCTTGAT 182669 || | || |||||||| || ||| | || | | | |||| | || | | || Sbjct 380 GGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTAGA- 436 Query 182670 GGTCAG--GGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTA 182727 |||| | || | | ||||||| ||||| || || | || | || | || |||| Sbjct 437 -CTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTA 495 Query 182728 TGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCAC 182766 ||||||| ||||||||| | || |||||| ||||||||| Sbjct 496 TGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 165 bits (182), Expect = 1e-35 Identities = 291/417 (70%), Gaps = 9/417 (2%) Strand=Plus/Minus Query 182364 GGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAG 182423 || || || || || ||||| ||||| || || ||||| || || || | | || ||| Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCG-GAG 650 Query 182424 ACGACT--GAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCT 182481 || ||| || | | | |||| || | || || | ||||| || || || ||||| | Sbjct 649 AC-ACTTGGATCTA-ACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACAT 592 Query 182482 ATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTCA 182541 ||| ||| ||||| ||||| ||||| ||| | | || |||||||||| || | Sbjct 591 ATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTA 532 Query 182542 ACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTCA 182601 ||||||| | | ||||||||||| || |||||||| || | || || ||||||| Sbjct 531 ACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCA 472 Query 182602 CCGCACTTGGTGTCTCCACGATGGCATTCAACCTCAACGGTTTCAACTTCAACCAGTCCA 182661 || | || || || || || ||| | || ||| | || || | |||||||| | || Sbjct 471 CCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCAC 412 Query 182662 TCCTTGATGGTCAG--GGTCGTGTCCTTAACACTTGGGCAGATGTATTGAACCGTGCTGG 182719 | | || |||| |||| | | ||||||| ||||| || || | || | || | Sbjct 411 TTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGA 354 Query 182720 TCTTGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTAGATCTTGC 182776 || ||||||||||| ||||||||| | || |||||| |||||||||||||||| || Sbjct 353 CCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 611569248942600