Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq9616 311 1e-79 seq15666 253 2e-62 seq10300 228 9e-55 seq9663 100 3e-16 seq14097 91.5 2e-13 seq16576 84.2 3e-11 >seq9616 Length=845 Score = 311 bits (344), Expect = 1e-79 Identities = 393/539 (73%), Gaps = 6/539 (1%) Strand=Plus/Plus Query 170131 GGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTCATG 170190 || || ||| |||| || || ||||| |||||||| || || || ||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 170191 TTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCT 170250 || |||||||||||||| |||| |||| | ||||| |||||||| || ||| || || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 170251 GGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTA 170310 | | | ||||||||| | || ||| || ||||| || ||| | ||||| || |||||| Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 170311 ATCAGAGAGACAACAGA---TAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAA 170367 | ||||||| | |||| |||| || | || || | ||||||||| | Sbjct 188 CTTGCAGAGACACTTGGATCTAAC---TCACTCAATTCAGGCTATATATTCGGACAGTAG 244 Query 170368 GAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATAT 170427 || || ||||| | ||| |||||||||||||||||||||||||| || ||||| || Sbjct 245 GATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTAC 304 Query 170428 GCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGC 170487 |||||||||||| | || | ||||||||||| || ||| || ||| || | Sbjct 305 AGTAGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGT 364 Query 170488 ATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTC 170547 || ||||| || || | || | | |||||||| |||||| | ||||| | |||||| Sbjct 365 ATATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTC 424 Query 170548 AACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAAC 170607 ||| | ||| | ||||| | ||| | || || |||||||| ||| | ||||| Sbjct 425 AACGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAAT 484 Query 170608 AGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTCCCACTTGA 170666 |||||| |||||||||||||||||||||||||| | |||||||||||||||||||| || Sbjct 485 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGA 543 >seq15666 Length=534 Score = 253 bits (280), Expect = 2e-62 Identities = 380/536 (71%), Gaps = 9/536 (2%) Strand=Plus/Plus Query 170131 GGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTACATTTAACTTC-AT 170189 || || ||| |||| || || ||||| |||||||| || || || ||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 170190 GTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGC 170249 ||| |||||||||||||| ||||||||| | |||||||||||||| || ||| || || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 170250 TGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCT 170309 | | | || |||||| | || ||| || ||||| || ||| | || || || ||||| Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 170310 AATCAGAGAGACAACAGA---TAACGAGTCACAGAACTATGGATACAAATTCGGACAAGA 170366 | | ||||||| | |||| |||| || | || || | || | ||| || Sbjct 184 ACTTGCAGAGACACTTGGATCTAAC---TCACTCAATTCAGGCTATATATGTGAACAGGA 240 Query 170367 AGAAGAAACATACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATA 170426 || || ||||| | ||| ||||||||||||||||||||||||| || ||||| || Sbjct 241 GGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTA 300 Query 170427 TGCTAGCTTTAACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATG 170486 | |||||||||||| | || || ||||||||||| || ||| || ||| || | Sbjct 301 CGGTAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGG 360 Query 170487 CATCTGGTTAACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGATTTAACTT 170546 || ||||| || || | || | || ||||| |||||| | |||| | | | Sbjct 361 TATATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCT 418 Query 170547 CAACCAGTCAATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAA 170606 ||| | ||| | ||||| | | | | || || |||||||| ||| | ||||| Sbjct 419 CAATGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAA 478 Query 170607 CAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTCCCAC 170662 |||||| |||||||||||||||||||||||||| | ||||||||| ||||||||| Sbjct 479 TAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 228 bits (252), Expect = 9e-55 Identities = 298/410 (73%), Gaps = 7/410 (2%) Strand=Plus/Minus Query 170260 GGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGAGAG 170319 |||||| | || ||| || ||||| || ||| | ||||| || || ||| | ||| Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGAG 650 Query 170320 ACAACAGA---TAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACA 170376 ||| | |||| |||| || | || || | ||||||||| || || || ||| Sbjct 649 ACACTTGGATCTAAC---TCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACA 593 Query 170377 TACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTT 170436 || | ||| |||||||||||||||||||||||||| || |||||||| | ||||||| Sbjct 592 TATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTT 533 Query 170437 AACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTA 170496 ||||| | ||||| ||||||||||| || ||| || ||| || | || ||||| Sbjct 532 AACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTC 473 Query 170497 ACTTCAATGGGTATTTGCACAATGGCATTTAACCTTAATGGATTTAACTTCAACCAGTCA 170556 || || | || | | |||||| | |||||| | ||||| | |||||||| | ||| Sbjct 472 ACCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCA 413 Query 170557 ATCGTAGATGGATCTGGTAAAGTAGTTCCTACATGGGCAGACGTTCTTAACAGAGCAAAC 170616 | ||||| | ||| | || || |||||||| ||| | ||||| |||||| || Sbjct 412 CTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGAC 353 Query 170617 CTAGGTATGGAAGTAATGCATGAGCGTAATGCACACAACTTCCCACTTGA 170666 |||||||||||||||||||||||| | ||||||||| |||||||||| || Sbjct 352 CTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGA 303 >seq9663 Length=843 Score = 100 bits (110), Expect = 3e-16 Identities = 105/138 (76%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 170097 AGCAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAAT 170156 |||||||| || |||||| | || || ||| | || || ||| |||| || || || Sbjct 207 AGCAGCATCAGCAGTATTCATTGTTTACCCTATAGGACAAGGAAGTTTCAGTGATGGTAT 266 Query 170157 GCCTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACAT 170216 ||| |||||||| || || |||||||| | |||||||| |||||| || |||||||| Sbjct 267 GCCACTAGGTATTAGTGGAACCTTTAACTTTACGTTCGTATGCCAAGCGGAACACAACAT 326 Query 170217 TCTTATGCACCCATTCCA 170234 || ||||||||||||| Sbjct 327 GCTCGTGCACCCATTCCA 344 >seq14097 Length=611 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 169792 GCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCA 169851 || ||||| ||| || || || ||||| |||| ||||||||||||||||||||| Sbjct 70 GCATTCATTCTAGCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGC 129 Query 169852 TTCATGTATGGTAACAACATC--ATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 169909 || | ||||||||||||||| || | || ||||| | ||| ||| || || || | Sbjct 130 CTCCTATATGGTAACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAG 189 Query 169910 GTCTCCACTTCTATCCTATTTGGGAAGCA 169938 | | ||||| ||||| | ||||||||| Sbjct 190 GAGTTCACTTTTATCCAGTATGGGAAGCA 218 Score = 91.5 bits (100), Expect = 2e-13 Identities = 110/149 (74%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 169792 GCTTTCATCGCAGCTCCACCTGTGGACATCGATGGAATCAGAGAACCTGTAGCAGGTTCA 169851 || ||||| ||| || || || ||||| |||| ||||||||||||||||||||| Sbjct 416 GCATTCATTCTAGCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGC 475 Query 169852 TTCATGTATGGTAACAACATC--ATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCG 169909 || | ||||||||||||||| || | || ||||| | ||| ||| || || || | Sbjct 476 CTCCTATATGGTAACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAG 535 Query 169910 GTCTCCACTTCTATCCTATTTGGGAAGCA 169938 | | ||||| ||||| | ||||||||| Sbjct 536 GAGTTCACTTTTATCCAGTATGGGAAGCA 564 >seq16576 Length=500 Score = 84.2 bits (92), Expect = 3e-11 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 170588 CATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATG 170647 ||||||| ||| | ||||| |||||| ||||||||||||||||||| |||||| | |||| Sbjct 500 CATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATACATGAGAGGAATG 441 Query 170648 CACACA 170653 |||||| Sbjct 440 CACACA 435 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582727226608800