Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq9616 196 5e-45 seq10300 113 5e-20 seq3432 84.2 2e-11 >seq9616 Length=845 Score = 196 bits (216), Expect = 5e-45 Identities = 371/544 (68%), Gaps = 4/544 (1%) Strand=Plus/Minus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | |||||||| ||||| || | || ||||| ||||||||||| || | Sbjct 549 GCTAGATCTAGTGGGAAGTTGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCT 490 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 || | |||||||| |||||||| || || | | | | || || ||||| Sbjct 489 GCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTGAT 430 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 | |||||||| | ||||| | ||||| ||||| || || || |||| | ||| Sbjct 429 TCGTTGAAGTTCAGACCATTTAAGTTAAAAGCCATTGTAGATACTCCTAGAGAGGTGAAC 370 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || | |||||||| || || | ||| ||||| | | ||||| ||| Sbjct 369 CATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTATGCTTCTTGAGTTGTTAAAG 310 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 | |||||||| || || | ||| ||||| || || || || || |||| || Sbjct 309 CTACTGTACTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGTC 250 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || | || ||||| | || || | || ||||| | | | ||| |||| | Sbjct 249 TCATCCTACTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCC--AAGTGTCTCTG 192 Query 84333 --ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACCGAATA 84390 | |||||| ||||| || | ||| |||||||| ||| |||||||| ||| ||||| | Sbjct 191 CAAGTAGAGATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCCGAAAA 132 Query 84391 CACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGTTCCGCCTGGAAGA 84450 || | || ||||| || ||||| || |||||||| | ||| | ||||| || ||||| | Sbjct 131 CAGCTGCTACTCCTAATATGTGGAATGGATGCATTAAAATGCTGTGTTCTGCTTGGAATA 72 Query 84451 CAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTT 84510 | | ||| ||||||| ||||| ||||| |||||||| |||||| |||| |||| Sbjct 71 CTAACATAAAGTTGAAGGTTCCACTAATACCTAGTGGCATACCATCACTGAAACTTCCTT 12 Query 84511 GCCC 84514 | || Sbjct 11 GTCC 8 >seq10300 Length=803 Score = 113 bits (124), Expect = 5e-20 Identities = 276/415 (67%), Gaps = 5/415 (1%) Strand=Plus/Plus Query 83973 GCAAGATCCAACGGGAAGTTATGTGCGTTACGTTCGTGCATCACTTCCATACCAAGCCCG 84032 || ||||| | ||||||| ||||| || | || ||||| ||||||||||| || | Sbjct 297 GCTAGATCTAGTGGGAAGTCGTGTGCATTCCTCTCATGCATTACTTCCATACCTAGGTCT 356 Query 84033 GCACGATTAAGTACATCGGCCCAGGTATTGACAACACGGTTTTGGCTATCGACAAGACTC 84092 || | |||||||| |||||||| || || | | | | || || ||||| Sbjct 357 GCTCTATTAAGTATGTCGGCCCATGTGTTAATTAGATGACCTTCTGAGTCTACAAGTGAT 416 Query 84093 TGATTGAAGTTAAATCCATTCAGATTAAATGCCATGGTGCTAACACCCAGAGCAGCAAAC 84152 | ||||||||| | ||||| | ||||| | ||| || || || |||| | ||| Sbjct 417 TCATTGAAGTTCAGGCCATTTAAGTTAAAAGTCATTGTAGATACTCCTAGAGAGGTGAAC 476 Query 84153 CAAATGCCAACCACTGGCCAAGCAGCCAAGAAAAAGTGGAGAGAACGACTATTGTTGAAG 84212 || || || | |||||||| || || | ||| ||||| ||| | ||||| ||| Sbjct 477 CATATACCTATTACTGGCCATGCTGCTAGGAAGAAGTGTAGACTTCTTGAGTTGTTAAAG 536 Query 84213 GAAGCATACTGGAAGATAAGACGACCGAAGTAGCCGTGAGCAGCAACAATATTATAAGTT 84272 | | || ||||| || || | ||| ||||| || || || || || |||| || Sbjct 537 CTACCGTATTGGAATATTAGTCTACCAAAGTATCCATGTGCTGCTGATATGCTATATGTC 596 Query 84273 TCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTTTCTGTAGTTTCTCGG 84332 || || || || ||||| | || || | || ||||| | | | ||| |||| | Sbjct 597 TCATCCTCCTGTCCGAATATATAGCCTGAATTGAGTGAGTTAGATCC--AAGTGTCTCCG 654 Query 84333 --ATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGAGCTCCACC 84385 | ||| || ||||| || | ||| |||||||| ||| |||||||| ||| || Sbjct 655 CAAGTAG-GATGAAGTTACCAATGATCCATGCATAGCACTGAATAGAGATCCTCC 708 >seq3432 Length=1729 Score = 84.2 bits (92), Expect = 2e-11 Identities = 61/71 (86%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 149449 GCGGGATAGAGCAGTCTGGTAGCTCATCAGTCTCATAAGCTGAAGATCGGTGGTTCAAAT 149508 ||||||| |||||||| |||||||| |||| ||||||| |||||| ||| ||||||||| Sbjct 1055 GCGGGATGGAGCAGTCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTCAAAT 996 Query 149509 CCACCTCCCGC 149519 || ||||||| Sbjct 995 CCTACTCCCGC 985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571155224969160