Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq7974 95.1 4e-15 seq7298 93.3 1e-14 seq5661 82.4 2e-11 seq479 80.6 8e-11 >seq7974 Length=968 Score = 95.1 bits (104), Expect = 4e-15 Identities = 106/142 (75%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 21312 TCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGAC 21371 |||| || || | ||||||||| | || || |||||||||||| | | || || | Sbjct 136 TCCCGGTTATTGCTCTGTCGCAGTTAAATCGAAGCCTGGAGCAGCGTACCGATAAACGCC 195 Query 21372 CGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGT 21431 || | |||||||| || | |||||||| ||||| |||||||| || ||||| ||| ||| Sbjct 196 CGGTTATGTCGGATTTGAGAGAGTCCGGCGCGATTGAGCAGGATGCGGATGTCATCCTGT 255 Query 21432 TCGTGTACCGCGACGAGGTCTA 21453 | | || || || |||||||| Sbjct 256 TTATCTATCGGGATGAGGTCTA 277 >seq7298 Length=1026 Score = 93.3 bits (102), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 8/205 (4%) Strand=Plus/Plus Query 21314 CCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGAACAAGCGACCG 21373 || ||||| | ||||| ||||| ||||| |||||| ||||| | | || || ||| Sbjct 376 CCGGTGATAGCCCTGTCTCAGCTGAACCGTGGCCTGGAACAGCGCGCTGATAAACGTCCG 435 Query 21374 ATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTC 21433 | | || ||| |||| ||||| || | ||||||||||||||||| | || ||||| Sbjct 436 GTTAACTCTGACTTGCGGGAGTCGGGCTCAATCGAGCAGGACGCCGACTTAATTATGTTT 495 Query 21434 GTGTACCGCGACGAGGTCTACCACCCGGATACCCAGTACCG----CGGCGTGGCTGAGTT 21489 | ||||| |||||||| ||||| ||| |||| | | ||| |||||||| | Sbjct 496 ATCTACCGGGACGAGGTTTACCATGAGGA----CAGTGCTGAGAAAGGCCTGGCTGAGAT 551 Query 21490 GATCATCGCGAAGCACCGCAACGGC 21514 ||||| | || || || || ||| Sbjct 552 TATCATTGGTAAACAGCGAAATGGC 576 >seq5661 Length=1220 Score = 82.4 bits (90), Expect = 2e-11 Identities = 108/148 (73%), Gaps = 4/148 (3%) Strand=Plus/Minus Query 21302 GAGCTTGGTATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCG 21361 ||||| | ||||| ||||||| || || ||||||| ||| |||| | || || Sbjct 1113 GAGCTCGACATCCCTGTGATCGCCCTTTCCCAGCTCAGCCGTCAGGTGGAAAACCG--CG 1056 Query 21362 AA--CAAGCGACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCG 21419 || |||||| || |||||||| |||| || || || | |||||||||||||||| Sbjct 1055 AAGACAAGCGCCCCCAACTGTCGGACTTGCGTGAATCAGGCTCCATCGAGCAGGACGCCG 996 Query 21420 ATGTGATCATGTTCGTGTACCGCGACGA 21447 | || |||||||||| | |||||| || Sbjct 995 ACGTCGTCATGTTCGTCTTCCGCGAAGA 968 >seq479 Length=7726 Score = 80.6 bits (88), Expect = 8e-11 Identities = 102/138 (74%), Gaps = 2/138 (1%) Strand=Plus/Plus Query 21311 ATCCCCGTGATCGTGCTGTCGCAGCTCAACCGCTCCCTGGAGCAGCGGCCGA-ACAAGCG 21369 ||||| ||||||| |||||||||||| || |||| ||| || | |||| || Sbjct 1855 ATCCCTGTGATCGCGCTGTCGCAGCTTTCGCGACAGGTGGAA-AGCCGCGAAGACAAACG 1913 Query 21370 ACCGATGATGTCGGACCTGCGCGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCAT 21429 ||| |||| ||||| || || || || ||||||||||||||||||| || |||| Sbjct 1914 CCCGCAATTGTCCGACCTTCGGGAATCGGGCTCGATCGAGCAGGACGCCGACGTCGTCAT 1973 Query 21430 GTTCGTGTACCGCGACGA 21447 |||||||| ||||| || Sbjct 1974 GTTCGTGTTTCGCGAAGA 1991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157079472523178