Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq486 127 2e-24 seq13573 96.9 3e-15 seq10619 82.4 6e-11 >seq486 Length=7659 Score = 127 bits (140), Expect = 2e-24 Identities = 178/250 (71%), Gaps = 0/250 (0%) Strand=Plus/Plus Query 29780 GCTCCCTCTCGAGCTGAGTCTTCAGCGGTTCCACGTGATCCAGGTAGACGTGAGCGTCTC 29839 |||| | ||||||||| || |||| | | || ||||| | ||||| ||| || || | Sbjct 2643 GCTCGCGCTCGAGCTGGGTTTTCACCTGCTCGACGTGGTTGGTGTAGATGTGCGCATCGC 2702 Query 29840 CCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGA 29899 | | |||||| || || || ||| | | | || || || || || ||||||| ||| | Sbjct 2703 CGAAGGTGTGCACGAAGTCCCCCACTCCCAATCCCGTCACCTGCGCGATCATGTGCGTCA 2762 Query 29900 GGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCCCGACCTCTGGT 29959 ||| | ||| ||||||||||| || || || ||||| || |||| |||| | ||||| Sbjct 2763 GGATGGCGTAACTGGCGATGTTGAACGGCACGCCGAGGAACAGGTCCGCCGAGCGCTGGT 2822 Query 29960 AGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCACGGAG 30019 ||||||| || |||| ||| || ||||| ||||| ||| ||||||||| | Sbjct 2823 AGAGCTGGCAGCTCAGCTTGCCGCCGGCGACGTAGAACTGGAACAGCAGGTGGCACGGCG 2882 Query 30020 GAAGAGCCAT 30029 | || ||||| Sbjct 2883 GCAGGGCCAT 2892 >seq13573 Length=635 Score = 96.9 bits (106), Expect = 3e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 29829 GTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCAT 29888 ||| ||||| || | |||||||||||||||||||| |||| ||| || | | ||||| Sbjct 429 GTGCGCGTCGCCGAATGTGTGGACAAACTCTCCCGGCTCTAACCCTGTTGCTCGCGCCAT 370 Query 29889 CATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCATGTCCCC 29948 ||| ||| || | || ||| ||||| || || || || || || | || | Sbjct 369 CATCATCGTCAGCAAAGCATAGGATGCGATATTGAACGGGACACCAAGGAAGACATCAGC 310 Query 29949 CGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGT 30008 ||| | || ||||||||||| |||| |||||| | |||| ||||||| ||| | Sbjct 309 CGAACGTTGATAGAGCTGACAATTTAGCTTTCCGTCCATAACGTTAAACTGAAACAGGCA 250 Query 30009 GTGGCACGGAGGAAGAGCCAT 30029 |||||| || || || ||||| Sbjct 249 GTGGCATGGCGGCAGCGCCAT 229 >seq10619 Length=779 Score = 82.4 bits (90), Expect = 6e-11 Identities = 152/223 (68%), Gaps = 0/223 (0%) Strand=Plus/Minus Query 29807 GTTCCACGTGATCCAGGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTT 29866 |||||| || | ||| || | || ||||| || | ||||||||||| || |||| | Sbjct 511 GTTCCAGATGGTTCAGATAAAGATGCGCGTCACCAAACGTGTGGACAAAATCGCCCGCCT 452 Query 29867 CTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGG 29926 || || ||| || || ||||| | || | || | ||| ||| || || |||| Sbjct 451 TCAGATCGCAGACCTGGGCAATCATCTCTGTCAACAGCGCATAGGAGGCAATATTGAAGG 392 Query 29927 GTACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGC 29986 | ||||| || || || | | |||||||||||||||||| |||| ||||| Sbjct 391 GCACCCCCAGAAAGATATCGGCACTGCGCTGGTAGAGCTGACACGAAAGCTTGCCGTCAG 332 Query 29987 TCACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCAT 30029 ||| || |||||| ||| | ||||| || || || ||||| Sbjct 331 CCACATAGAACTGAAACAGGCAATGGCATGGCGGCAGGGCCAT 289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408535046092421