Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_017972.1 Length=280538 Score E Sequences producing significant alignments: (Bits) Value seq4414 154 3e-32 >seq4414 Length=1435 Score = 154 bits (170), Expect = 3e-32 Identities = 233/331 (70%), Gaps = 9/331 (3%) Strand=Plus/Minus Query 23044 GTGGTATTGGAAAACTCCAGAGTAAGCGAGCCTTTCCATTCTGGTTCCAGCGGCGTGACG 23103 || || ||||| || ||||| || | | ||||| ||| || ||||||||||| || ||| Sbjct 1435 GTAGTGTTGGAGAATTCCAGGGTTACCTGGCCTTCCCACTCCGGTTCCAGCGGGGTAACG 1376 Query 23104 TTTACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAATACGTCA 23163 || |||||||||||||| || || || || ||||||||||||||| | |||| Sbjct 1375 TTCACGATGATGCCGCAGCGGGCGTAGGTGCTTTTGCCGAGGCAGATGGTGAGTACGCTT 1316 Query 23164 CGCGGAATGTTGAAGTGTTCCGGCGTGTTTGCCAGTGCGAAACTGTTCGGCGGAATGATC 23223 | || ||| ||||| |||| ||| ||||| ||||| ||||||||||| ||||| Sbjct 1315 CTGGGGATGCGGAAGTATTCCACGGTGCGCGCCAGGGCGAAGCTGTTCGGCGGGATGATG 1256 Query 23224 AGGCCTTGGCCGTTTGGAACGTGCTTCGTAACGAAATTGTCTTCGGTGAAATTCTTTGGA 23283 | | | |||| ||| | | ||||| ||| ||| ||| |||||||| Sbjct 1255 CAGACGTCGCCG--------GTG-TAGTTGACGAAGCTGTTTTCATCGAAGTTCTTTGGG 1205 Query 23284 TCGACAACCGCGTTATTCAGGTTGGTGAAAACCTTGAATTCGTTACCGCAACGAATATCG 23343 || || ||| | | | ||||||||| | ||||||||||| | ||| || | ||| Sbjct 1204 TCTACGGTAGCGCTGTGGACGTTGGTGAAGATTTTGAATTCGTTGCTGCAGCGTACGTCG 1145 Query 23344 TAGCCGTAGCTGGAAACACCGTAGGGAATGA 23374 ||||||||||| || ||||||| |||| Sbjct 1144 TAGCCGTAGCTTGAGGTGCCGTAGGAGATGA 1114 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 897407607386160