Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_017981.1 Length=49981 Score E Sequences producing significant alignments: (Bits) Value seq11540 118 3e-22 >seq11540 Length=733 Score = 118 bits (130), Expect = 3e-22 Identities = 229/336 (68%), Gaps = 3/336 (1%) Strand=Plus/Minus Query 25943 TGCCGATCATCTGCATGGTTCCGCCAACGTTGACCACAATTTCAGTGGTGTAGCGCTCAA 26002 || ||| ||||||||| ||| | || |||||||| || |||||||| || Sbjct 501 TGTCGAGCATCTGCATCTGGCCGTTGATGTCTACCACAATCTCGGTGGTGTATACGTCCT 442 Query 26003 CGCCGTCCTT-TTC--CCACTTGCGGGTTTTCAGTTGCCCCTCAATGTAAACCTGTGAAC 26059 || || || ||| |||||||||||||| ||| | || || || || |||| |||| Sbjct 441 GCCCTTCTTTATTCTGCCACTTGCGGGTTTGCAGGCGACCTTCGATATACACCTTGGAAC 382 Query 26060 CTTTCTTCAGGTACTCGCCCGCGATCTCCGCTACCTTGCCAAACAGCACGACGCGATGCC 26119 |||| |||||||| ||| || | ||||| |||||||| |||||||| || || |||| Sbjct 381 CTTTACGCAGGTACTGGCCGGCCACTTCCGCCACCTTGCCGAACAGCACAACCCGGTGCC 322 Query 26120 ATTCTGTCACTTCTTTCTTTTCGCCGGTCTGCTTATCGTTCCAGCTTTCTGAGGTCGCTA 26179 |||| || | | | | ||| ||||| ||| || | ||||| ||| || | Sbjct 321 ATTCGGTTCTCGGTACCATCTGGCCAGTCTGGCGATCCTTGTAACTTTCATCGGTAGCCA 262 Query 26180 CGGTAATGTTGGCGACTGCGCCGCCATTAGGCATGTAACGGATCTCTGGATCGTTCCCCA 26239 | | | || | || ||| |||||| || | || ||| | || ||||| | |||| Sbjct 261 GGTTGAGATTCACAACCGCGTTGCCATTCGGGGTATAGCGGGTATCCGGATCCTGGCCCA 202 Query 26240 GGTTACCGACAAGGATTACTTTATTTACGCCGCGTG 26275 | ||||| | || ||||| || || | ||| |||| Sbjct 201 GATTACCAATGAGAATTACCTTGTTAATGCCTCGTG 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159786139605782