Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_018088.1 Length=104936 Score E Sequences producing significant alignments: (Bits) Value seq8678 205 6e-48 seq10471 150 1e-31 >seq8678 Length=911 Score = 205 bits (226), Expect = 6e-48 Identities = 602/917 (66%), Gaps = 22/917 (2%) Strand=Plus/Minus Query 71842 AGTAACTTATGCCTTGAAATTGCATTACCAACTGAACCTATGCAGGATATTAATAAGCCT 71901 ||||| | || || |||||||| | |||||| | || || || || |||| | || Sbjct 906 AGTAATCTGTGTCTGGAAATTGCCCTGCCAACTAAGCCACTGGAGCATGTTAACGATCCG 847 Query 71902 GAAGGTGAAATTGCATTATGTACATTAGCTGCATTCAATCTTGGTGCCATTAAAGATTTA 71961 | ||||||||||| | ||||| ||| | || || || | || || || | || | Sbjct 846 AACGGTGAAATTGCGCTCTGTACCTTATCGGCCTTTAACTTAGGCGCGATAACCGAACTG 787 Query 71962 GGTCGTATGGAAAAATTATCCGAATTAGTTATTAGAGCATTAGATGCTTTACTTGATTAC 72021 | ||||| | ||| |||| | | | || | | || | || ||||| Sbjct 786 AATGAACTGGAAGAGTTAGCCGAGCTGGCAGTGCGATCGCTGGACAGCCTGCTGGATTAT 727 Query 72022 CAAGATTATCCAATACTAGCTGCTGAAAATGCTACCAAGC-GAAGACGTACTTTAGGTGT 72080 || ||||| || || | || ||| | |||| | ||| | | | || || | ||||| Sbjct 726 CAGGATTACCCTATTCCGGCAGCTTACCATGC-ATCAATCAGCCGTCGCACCCTGGGTGT 668 Query 72081 TGGCATTATTAATTATGCTCATCACTTAGCTAAAAATGGTGTTAAATATTCTGATGGCAG 72140 ||| | ||||| || || || | | || ||||| |||||||||||||| || ||| Sbjct 667 TGGGGTAATTAACTACGCGTATTATCTGGCGAAAAACGGTGTTAAATATTCGGACGGCTC 608 Query 72141 TGCCAACAATTTAACTCAT-GAACTCTTCGAAAGTTTTCAGTATTACCTATTGAAAGCAA 72199 || ||| |||||| || | ||| || || |||||||||| || || ||||| Sbjct 607 GGCTAACGGTTTAACCCACCGCACTTTT-GAGGCGATTCAGTATTATCTGTTAAAAGCGT 549 Query 72200 GTTGTGATTTAGCCAAAGAACAAGGCGCTTGTCCTGCATTCCATGAGACAACTTATTCAC 72259 | | || | || |||||| | || ||| ||| |||| || || ||| | Sbjct 548 CCAACAAGCTGGCGCAGGAGCAAGGCCCCTGCCCTAAATTTAATGAAACGACCTATGCCG 489 Query 72260 AGGGTATATTACCTATTGACCGCTATAATAAGTCAGTAGATGGTATTCATAGTGAA---- 72315 | ||||| |||||||| ||| |||| || || |||| || || |||| Sbjct 488 AAGGTATCTTACCTATCGACAGCTACAAAAA------AGATT-TAGACAAAGTGTGTGCC 436 Query 72316 GAGT---TACATCTTCCGTGGGAGCAATTGAGAGAAGATATTTTGAAATACGGTTTACGT 72372 ||| | || | |||||||||||| | |||||||| || ||| || | ||| Sbjct 435 GAGCCGCTGCAGTTAAACTGGGAGCAATTGCGCAAAGATATTCTGCAATTTGGCCTGCGT 376 Query 72373 AATTCTACTGTATCCTCATTGATGCCAAGTGAAACAAGTTCTCAGGTATCTAATGCAACA 72432 || || || |||| | |||||||| ||||| || || ||||||||||||| Sbjct 375 AACTCGACGTTATCTGCGCTGATGCCATCAGAAACCTCGTCGCAAATATCTAATGCAACC 316 Query 72433 AATGGTATTGAACCACCTCGCGGTTTAATGAGCATTAAAGCAAGTAAAGATGGTATCTTG 72492 || || |||||||| || |||||| || || ||||||| |||||||| || || || Sbjct 315 AACGGCATTGAACCGCCGCGCGGTCATATCAGTGTTAAAGCCAGTAAAGACGGGATTTTA 256 Query 72493 AAGCAAGTAGTACCT-CATATTGGTAC-AATGGCTAATGACTATGAATTGTTGTGGAATA 72550 |||||||| || ||| |||| | | | || | | || ||| || ||||| ||| Sbjct 255 AAGCAAGTGGTGCCTGAATATGAGCGCTTAAAGC--ACCAGTACGAACTGCTGTGGGATA 198 Query 72551 TTCCAAGCAATAATGGCTATATTGAATTAGTTGCAATCATGCAAAAGTTTGTCGATCAGG 72610 | || ||| ||||||| | | || || || ||||| ||||||||||| ||| Sbjct 197 TCCCGTCAAATGATGGCTACCTGAGCCTGGTGGCGATTATGCAGAAGTTTGTCGACCAGA 138 Query 72611 CAATCTCTGCGAACACAAATTATGACCCTACTAAATTCGCAAATGGCAAAGTCCCAGTTA 72670 | || || || || || |||||||| || | |||||||| |||| || || | | Sbjct 137 CCATTTCGGCCAATACCAATTATGATCCGAATAAATTCGATGGTGGCCGGGTACCGATGA 78 Query 72671 AGCAAATTCTTAAAGATTTAATACGAGGCTATAAGCTTGGTGTTAAAACATTCTATTACC 72730 ||| | | ||||| | | | |||||||| || || ||||| | || |||| Sbjct 77 AGCTGTTATTAAAAGACCTGCTTACCGCATATAAGCTGGGGGTAAAAACCATGTACTACC 18 Query 72731 ATAACACCCGTGATGGT 72747 ||||||||||||||||| Sbjct 17 ATAACACCCGTGATGGT 1 >seq10471 Length=793 Score = 150 bits (166), Expect = 1e-31 Identities = 202/281 (72%), Gaps = 0/281 (0%) Strand=Plus/Plus Query 70552 GTAACAAAACGTGATGGTGGATTAGCACCTTTGGATTTAGATAAGATCCATAAAGTAATC 70611 || || |||||||| || | | |||| | ||||||||||| || || || || Sbjct 103 GTCACCAAACGTGACGGACGCCGTGAACCTCTCGATTTAGATAAAATTCACCGGGTCATT 162 Query 70612 GCATGGGCTGCAGAGGGACTTGAAAATGTCTCAGTATCTCAAGTTGAATTGAAATCTCAT 70671 | ||||| || || || || | ||||| ||||||||||| |||||| | || |||||| Sbjct 163 ACCTGGGCCGCCGAAGGCCTGCATAATGTGTCAGTATCTCAGGTTGAACTTAAGTCTCAT 222 Query 70672 ATCCAATTTTATGAAGGTATGAAGACAGAAGATATTCACGAAATAATCATTAAAGCAGCA 70731 || || ||||| || || || ||| | | ||||||||||||| ||||||||||| || Sbjct 223 ATTCAGTTTTACGATGGGATTAAGTCGGCTGATATTCACGAAACTATCATTAAAGCCGCT 282 Query 70732 GCAGATTTAATATCGGTTGACACTCCTGATTATCAGTATCTCTCATCTCGTTTAGCCGTA 70791 || || | || || |||| || ||||||||||| || | | | |||| ||| Sbjct 283 GCCGACCTGATTTCAAAAGACAGCCCCGATTATCAGTACCTGGCTGCCAGGCTAGCTGTA 342 Query 70792 TTTCATTTACGTAAACAAGCCTATGGTGATTTTGTACCACC 70832 ||||| || |||||| |||| ||||| | |||| ||||| Sbjct 343 TTTCACTTGCGTAAAAAAGCTTATGGCCAGTTTGAGCCACC 383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 335602583774809