Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_018282.1 Length=61167 Score E Sequences producing significant alignments: (Bits) Value seq388 136 2e-27 seq34 98.7 4e-16 >seq388 Length=8708 Score = 136 bits (150), Expect = 2e-27 Identities = 154/204 (75%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 6560 CTACCGCGAAGTGGACGCCCGGGCGCTGTGGGAC-GCGATCATGCGCGGGACCTGGGATT 6618 ||||||| ||| | || || | |||||| || ||| ||||||||| ||||| |||| Sbjct 1797 CTACCGCACTGTGCAGGCACGCGATCTGTGGAACCGCG-TCATGCGCGCGACCTATGATT 1739 Query 6619 GGGCGGAGCCGGGCGTGCTGTTCATCGACGCGATCAACCGCATGAACAACCTCTGGTACT 6678 || || || |||||| | || |||||| |||||| | |||||||| | || Sbjct 1738 ATGCCGAACCCGGCGTGATCTTTATCGACCGGATCAATCAGGCCAACAACCTGAGCTATG 1679 Query 6679 GCGAGACCATCGCCGCCACCAACCCCTGCGGTGAGCAACCCCTCCCGCCCTACGGTGCCT 6738 |||||||||||| || || |||||||| ||||| |||||||| |||||||| ||||||| Sbjct 1678 TCGAGACCATCGCGGCGACAAACCCCTGTGGTGAACAACCCCTGCCGCCCTATGGTGCCT 1619 Query 6739 GTCTCCTGGGCTCCTTCAACCTGG 6762 | || ||||| || ||||| ||| Sbjct 1618 GCCTGCTGGGGTCGATCAACATGG 1595 Score = 89.7 bits (98), Expect = 2e-13 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 7133 CGAGGACGTGCGGGACGCCATCGCCAAATACGGCATCCGCAACTCCCACCTCACTTCCAT 7192 |||||||||||| ||||| ||| || |||||||||||||| | | ||||| || || Sbjct 1224 CGAGGACGTGCGCGACGCGATCCGAGAACACGGCATCCGCAACGCGCTGCTCACGTCGAT 1165 Query 7193 CGCCCCGACCGGGACCATCAGCCTGTGCGCCGACAACGTCAGCTCCGGGATTGAGCCGGT 7252 || ||||| ||||| ||| || | ||| | |||||| || ||||| |||||||| Sbjct 1164 TGCGCCGACGGGGACGATCTCGCTTTACGCTGGCAACGTGTCATCGGGGATCGAGCCGGT 1105 Query 7253 GTTCGCCTA 7261 || ||||| Sbjct 1104 TTTTGCCTA 1096 >seq34 Length=41571 Score = 98.7 bits (108), Expect = 4e-16 Identities = 137/187 (73%), Gaps = 4/187 (2%) Strand=Plus/Plus Query 6576 GCCCGGGCGCTGTGGGACGCGATCATGCGCGGGACCTGGGATTGGGCGGAGCCGGGCGTG 6635 |||||||| ||||||||| || ||| | |||| | | |||||||| ||||| Sbjct 34051 GCCCGGGCACTGTGGGACAAAATGATGGATGCCACCTACGCCTATGCGGAGCCCGGCGTC 34110 Query 6636 CTGTTCATCGA-CGCGATCAACC-GCATGAACAACCTCTGGTACTGCGAGACCATCGCCG 6693 | ||||| || ||| |||||| ||| ||||| ||| || ||||| || || || Sbjct 34111 ATTTTCATTGATCGC-ATCAACAAGCAA-AACAATCTCGCCTATTGCGAAACAATTCACG 34168 Query 6694 CCACCAACCCCTGCGGTGAGCAACCCCTCCCGCCCTACGGTGCCTGTCTCCTGGGCTCCT 6753 ||||||| ||||| || |||||||| ||||||||||| || |||||||| | || || Sbjct 34169 CCACCAATCCCTGTGGCGAGCAACCTCTCCCGCCCTATGGCGCCTGTCTTTTAGGATCAA 34228 Query 6754 TCAACCT 6760 |||| || Sbjct 34229 TCAATCT 34235 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195574293253546