Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_018452.1 Length=61847 Score E Sequences producing significant alignments: (Bits) Value seq656 93.3 2e-14 >seq656 Length=6167 Score = 93.3 bits (102), Expect = 2e-14 Identities = 212/314 (68%), Gaps = 14/314 (4%) Strand=Plus/Plus Query 9962 ACATGGC---ATCCGTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAA 10018 ||||||| ||| |||||||| |||||| ||||||||||||||||| ||| |||||| Sbjct 685 ACATGGCCGGATCAGTCAACAAGGTCATCATCGTCGGCAATCTCGGCCGCGATCCGGAAG 744 Query 10019 CCCGCTACCTCCCGAGCGGCGACGCAATCTCCAACATCCGCCTCGCTACGACCGATCGCT 10078 || | | || ||||| | | ||| |||| | || | || ||| |||| || Sbjct 745 TGCGGACATTTCAGAACGGCGGCAAAGTCTGCAACCTGCGGATTGCCACGTCCGAGAACT 804 Query 10079 ACAAGGA---CAAGGCGAGCGGCGAGATGAAGGAATCGACCGAATGGCACCGCGT--CAG 10133 || || ||| || ||||| |||||| ||| ||||||||| | || || Sbjct 805 GGAAAGACCGCAACACG---GGCGAACGCAAGGAACGGACTGAATGGCACAGTGTTGCAA 861 Query 10134 CTTCTTCGG--CCGCCTCGCCGAGATCGTCGACGAGTACCTGCGCAAGGGCGCGCCGGTC 10191 || ||| | ||| || || ||| | || | || || |||||| | ||| Sbjct 862 TTTTTTCCGAACCG-CTGGCGCGGATTGCAGAACAATATCTCAAGAAGGGCTCCAAGGTT 920 Query 10192 TACATCGAGGGCCGCATCCGCACGCGGAAGTGGCAGGATAACGCCGGCCAGGATCGCTAC 10251 |||||||| |||| | || || ||||||||||| | |||| |||||||||||| Sbjct 921 TACATCGAAGGCCAATTGGAAACCCGCAAGTGGCAGGACCAGTCCGGTCAGGATCGCTAC 980 Query 10252 ACGACCGAGATCGT 10265 ||||| || |||| Sbjct 981 ACGACAGAAGTCGT 994 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 197749864903866