Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_018837.1 Length=122024 Score E Sequences producing significant alignments: (Bits) Value seq8958 138 9e-28 >seq8958 Length=888 Score = 138 bits (152), Expect = 9e-28 Identities = 256/371 (69%), Gaps = 16/371 (4%) Strand=Plus/Plus Query 106636 ACGTGTTTATCAACACTAAAGGTATCGTAAATCTGCCCTTCGAATGTTGTAAAGTCAGCT 106695 || ||| | |||| ||||||||| |||| | ||||| || || ||||||| ||| Sbjct 114 ACCTGTGTGTCAAAGTTAAAGGTAT---AAATACGACCTTCAAACGTACTAAAGTCTGCT 170 Query 106696 TCATATTCTTGTTTGAAATAGGCTTCACTTACAGTTCTTCTTGCTTCTTCGATATCATCC 106755 ||||| ||||| || | || ||||| | || | || ||||||||| |||||| | Sbjct 171 TCATACTCTTGACGAAACTCTGCGTCACTCATTGTACGTCGTGCTTCTTCAATATCACGC 230 Query 106756 AAGCTAGCTCTAGGGTTATCACGGTATGTTCCATGAATAGATACCCAGTTTCGTAATTGA 106815 | | |||||| ||||| | || | || ||||| ||| | | |||| Sbjct 231 ATATCAATTCTAGGATTATCTTTCCAAGTAGCGTGTATAGAACACCATTCAGGAAATTCG 290 Query 106816 TCACTAAACCCTTTTTCATAAAATACTTT--AAACCAGTTATT---ACCGCGTGGAGTAG 106870 ||||||||||| || |||||| ||| ||||||||| || ||| | ||| |||| Sbjct 291 TCACTAAACCCACGTTGATAAAA--CTTGGCAAACCAGTTGTTTTTACCCCTTGGTGTAG 348 Query 106871 AAATAAACAGGGCCTTAGAGTTAGGCTTATCAAGAGTAGGACGTAATTGAATATCGAATG 106930 ||||||| | || || ||| |||||||| || ||||| | ||| ||||| || | Sbjct 349 AAATAAAGATTGCTTTGCTGTTTGGCTTATCTAGTGTAGGTCTTAACGCAATATTAAAAG 408 Query 106931 CTG---AACCACCGTCCATAGAGATTGCGGCTTCGTCAAATATAATCAAGTCATAAGAAC 106987 ||| ||| |||| || | |||||| || || |||||||| | ||||||||||| Sbjct 409 CTGTTTCACCTGCGTCTGTA---AGTGCGGCCTCATCGAATATAATAAGGTCATAAGAAC 465 Query 106988 GACCAACAGCA 106998 | |||||| || Sbjct 466 GTCCAACAACA 476 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 390273136331545