Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_018843.1 Length=103299 Score E Sequences producing significant alignments: (Bits) Value seq8678 96.9 2e-15 seq3797 82.4 5e-11 >seq8678 Length=911 Score = 96.9 bits (106), Expect = 2e-15 Identities = 259/390 (66%), Gaps = 12/390 (3%) Strand=Plus/Minus Query 69676 TGGTCTGCGTAACTCAACTCTGACCGCTCAAATGCCGTGTGAGACGTCCAGCCAGATCAC 69735 ||| ||||||||||| || | | || | ||||| | || || || || || | Sbjct 385 TGGCCTGCGTAACTCGACGTTATCTGCGCTGATGCCATCAGAAACCTCGTCGCAAATATC 326 Query 69736 CAACTCCACCAATGGTATTGAGCCGCCCCGCGGCCCGGTATCCGTG--AAGTCTTCCAAA 69793 || | ||||| || ||||| ||||| ||||| | |||| ||| || | ||| Sbjct 325 TAATGCAACCAACGGCATTGAACCGCCGCGCGGTCA--TATCAGTGTTAAAGCCAGTAAA 268 Query 69794 GACGGCATCGTGAAGATGGTCGTTCCAGACTTCGCTCAACTGAAAG-ACCAGTACGAGTA 69852 ||||| || | ||| || || || || | | | || |||| |||||||||| Sbjct 267 GACGGGATTTTAAAGCAAGTGGTGCCTGAATATGAGCG-CTTAAAGCACCAGTACGAACT 209 Query 69853 CCTGTGGGATATGCCGGATAACCGCGGCTATCTGACTAAGGTGGCCATCATTCAGAAGTT 69912 ||||||||||| ||| || ||||| |||| |||||| || || |||||||| Sbjct 208 GCTGTGGGATATCCCGTCAAATGATGGCTACCTGAGCCTGGTGGCGATTATGCAGAAGTT 149 Query 69913 CTTCGATCAGGCCATCTCTGCGAACACCAACTACGACCCGACTCGCTTCCCTGGCGACAA 69972 |||| ||| |||| || || || ||||| || || |||| | ||| ||| | | Sbjct 148 TGTCGACCAGACCATTTCGGCCAATACCAATTATGATCCGAATAAATTCGATGGTGGCCG 89 Query 69973 GGTTCCAATGATGAAGCTG---CTGGAAGATCTGCTGTTTGCGTATCAGCAAGGTGTGAA 70029 ||| || |||||||||| | |||| ||||| || ||| ||| || || || Sbjct 88 GGTACC---GATGAAGCTGTTATTAAAAGACCTGCTTACCGCATATAAGCTGGGGGTAAA 32 Query 70030 GACGCTTTATTACCACAACACGCGTGATGG 70059 || | || ||||| ||||| |||||||| Sbjct 31 AACCATGTACTACCATAACACCCGTGATGG 2 >seq3797 Length=1609 Score = 82.4 bits (90), Expect = 5e-11 Identities = 178/260 (68%), Gaps = 10/260 (4%) Strand=Plus/Minus Query 79548 CACGACCAACAATCGGATGGAGATGATGGGCGCCCTGATTG---CGCTGGA-GCGTCTGA 79603 ||| || || ||||| ||||| |||||||||| ||||| ||||| | ||| |||| Sbjct 537 CACAACGAATAATCGCATGGAATTGATGGGCGC---GATTGAGGCGCTGAACGCG-CTGA 482 Query 79604 AGTACCCCTGCAACGTGATCCTGCATTCCGACAGCCAGTATCTAAAAAACGGCATGACGC 79663 || | || | | ||| |||||| | || ||| |||| ||||| ||||| |||| Sbjct 481 AGAAGCCATCCTCTGTGCGTCTGCATACAGATAGCACGTATGTAAAAGACGGCCTGACCA 422 Query 79664 TCTGGATGAAAGGCTGGAAGCGTAACGGATGGATCACGTCTGAGAAGAAGCCAGTCAAAA 79723 ||||| | |||||||| || |||| || || | || |||||||| |||| Sbjct 421 AGTGGATCCATAATTGGAAGCGCAATAACTGGAAGACCTCCGCCAAAAAGCCAGTTAAAA 362 Query 79724 ACGTCGATCTCTGGAAACGTCTTGATGCGGCC-GCCAGCCGTCACAATGTCCGCTGGAAG 79782 || ||||| ||| | |||||| || || | ||| | || | || ||||| Sbjct 361 ACAAAGATCTATGGCAGGCTCTTGAGGCCGCATGTGAGCGG-CATGAGATCGAGTGGAAA 303 Query 79783 TGGGTTAAAGGTCATGCCGG 79802 ||||| ||||||||||| || Sbjct 302 TGGGTCAAAGGTCATGCAGG 283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330365242100220