Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq600 113 1e-19 seq16440 95.1 3e-14 seq8912 95.1 3e-14 seq1724 95.1 3e-14 >seq600 Length=6503 Score = 113 bits (124), Expect = 1e-19 Identities = 342/520 (66%), Gaps = 20/520 (4%) Strand=Plus/Plus Query 150277 ATATACAACTAACCTAACTGATCTTGCAGCAGAAGGTAAACTTGATCCACTAATTGGTCG 150336 |||||| | | || |||| | ||| | || |||||| |||||||| ||||||| || Sbjct 5735 ATATACTATCGATCTTACTGCCCGTGCTGAAGCAGGTAAGCTTGATCCGGTAATTGGCCG 5794 Query 150337 CGAAACTGAACTTGATGATCTAATTCAGATTCTTTCTCGTAAAACCAAAAAGAATGGTGC 150396 ||| ||| || | | |||||| | | ||| || ||||| ||| | Sbjct 5795 CGATGAAGAAATTCGTCGTTGTATTCAGGTATTACAACGTCGTACAAAAAATAATCCGGT 5854 Query 150397 GTTAGTTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCAT 150456 |||| ||||||| || ||||| |||||||| || ||||| || || |||| || || Sbjct 5855 GTTAATTGGTGAGCCTGGTGTGGGTAAAACCGCCATTGTTGAAGGGTTGGCACTGCGGAT 5914 Query 150457 CGCTAATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAAT---TCTT-TCTTTGAATA 150512 |||| || || || || |||| | ||| | || || || ||| Sbjct 5915 AATTAATAAAGAAGTGCCTGAGGGCCTGAAGAAC----AAACGGGTGTTATCACTGGATA 5970 Query 150513 TGGGTGCATTTACTG-CTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGA--CA 150569 |||| | ||||||| | ||| | || || ||||| ||||| ||||| || || | || Sbjct 5971 TGGGCTC-TTTACTGGCAGGTGCCAAATACCGTGGCGAATTTGAAGAGCGCTTAAAAGCA 6029 Query 150570 ATTTGCTACAAGAACTA---AAAGAACGCGATGATGTTATTCTGTTCATCGATGAAATCC 150626 | | || | || || |||||| | | || ||| |||| || || ||||| | Sbjct 6030 GTAT--TAAATGAGCTGGCTAAAGAAGAAGGCCAGGTGATTTTGTTTATTGACGAAATTC 6087 Query 150627 ATACTATTATGGGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAA 150686 |||| || | ||||| || | | | |||| | ||||| |||||||||| | Sbjct 6088 ATACCATGGTTGGTGCCGGCAAGGCAGAAGGCG---CCATGGATGCCGGCAATATGTTGA 6144 Query 150687 AACCTGCTCTATCTCGCGGTGAAATTCGTGTCATCGGTGCAACAACCTACGATGAATATC 150746 |||| || || | ||||||||| | | | | | || || || |||| || || |||| Sbjct 6145 AACCCGCGCTGGCCCGCGGTGAATTGCATTGCCTGGGGGCCACTACCTTAGACGAGTATC 6204 Query 150747 GTAAACACATTGAAAAAGATGCAGCACTACAGCGTCGTTT 150786 ||||| | |||||||||||||| || || |||| ||||| Sbjct 6205 GTAAATATATTGAAAAAGATGCGGCGCTTGAGCGGCGTTT 6244 >seq16440 Length=503 Score = 95.1 bits (104), Expect = 3e-14 Identities = 75/89 (84%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 324505 AGAAGTAT--ATGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTC 324562 ||||||| | |||| |||||||||| |||||||||| |||||||||||| || ||||| Sbjct 297 AGAAGTAAGAAGGGGGTTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTC 356 Query 324563 AACGGTTCGAACCCGTTTAGCTCCACAAA 324591 | |||||||| |||| ||| |||||| || Sbjct 357 AGCGGTTCGATCCCGCTTAACTCCACCAA 385 >seq8912 Length=891 Score = 95.1 bits (104), Expect = 3e-14 Identities = 73/86 (85%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 324505 AGAAGTAT--ATGGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTC 324562 ||||||| | |||| |||||||||| |||||||||| |||||||||||| || ||||| Sbjct 831 AGAAGTAAGAAGGGGGTTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTC 772 Query 324563 AACGGTTCGAACCCGTTTAGCTCCAC 324588 | |||||||| |||| ||| |||||| Sbjct 771 AGCGGTTCGATCCCGCTTAACTCCAC 746 >seq1724 Length=1402 Score = 95.1 bits (104), Expect = 3e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 324515 GGGGCTATAGCTCAGTTGGGAGAGCGTCTGCCTTGCACGTAGAAGGTCAACGGTTCGAAC 324574 |||| |||||||||| |||||||||| |||||||||||| || |||||| |||||||| | Sbjct 690 GGGGTTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC 631 Query 324575 CCGTTTAGCTCCACAAA 324591 ||| ||| |||||| || Sbjct 630 CCGCTTAACTCCACCAA 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147346660047346