Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq1156 345 6e-90 seq8156 271 1e-67 seq13808 123 3e-23 seq7 104 3e-17 seq3894 98.7 1e-15 seq3432 86.0 9e-12 seq1053 86.0 9e-12 seq781 84.2 3e-11 >seq1156 Length=3943 Score = 345 bits (382), Expect = 6e-90 Identities = 709/1039 (68%), Gaps = 45/1039 (4%) Strand=Plus/Plus Query 136648 CCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGCC 136707 |||||||| |||| || || ||||| |||||||| | ||||| || || |||| ||| Sbjct 1059 CCCTTCACACAGACAACCTGTTTGAGCGTGTGGACCACCTCCACCAGATCGGTCTGCGCC 1118 Query 136708 TCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCC 136767 ||||||| | |||||| |||||||||||| || | || ||||| ||||| ||| Sbjct 1119 GCCATGACGGTGTCGATATCCTTGTAGGCCGCAGGCGTCTCATCGATGACGCCTTGGTCT 1178 Query 136768 TTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGGTCGCCTTG 136827 || ||||| || || || || ||||| ||| || || | || ||||||||| |||| Sbjct 1179 TTACGGCATTCGACCCCTTCTGTGGCTTTGCGGTGATCGCCAAGCGTGAAGGTCCGCTTG 1238 Query 136828 GCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCCGCA 136887 || | ||||| |||||| | || ||||| || || ||||| |||||||| ||| | Sbjct 1239 GCTTCAGTCCGGGACATC-TTCGCCCCGCCCCATGGGAGCAGGAGCAGAAGCTGTCAGAC 1297 Query 136888 TTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCCGAAC 136947 | ||||||||||||||||||| ||||||||||||||||||| ||||| || ||||| | | Sbjct 1298 TGGCCCTTGCCGCGCACGATGAAGGACTTGGCCCCCATCGACCCGGGAATAATCCCCAGC 1357 Query 136948 TGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGG 137007 | ||| |||| || || || ||||||||||||| |||| | | ||||| Sbjct 1358 TCACCCTCGCGCGCAGAGACGGCCCCCTTGCGGGTCAGCCAGACTTCGGCCCCAAAGTGA 1417 Query 137008 AATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGC 137067 || ||| || |||||||||||||| ||||| || |||||| ||||||||| Sbjct 1418 TGCTCACGCTGCACATAGTTGTGGTGGCAATTCACGGCCGACTTGTCGGTCTTGAACTTG 1477 Query 137068 GGCAGGCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATC 137127 ||| || | ||||| ||| || |||||| ||||||| || || || | Sbjct 1478 CCCAG---CGTCTTACGCATCGCCATCAAAACCCGGGCCATCATGGCTTCCCGATTCAGG 1534 Query 137128 CGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCT 137187 || ||| |||||||| ||||| | || |||||||| ||||| | |||| ||||| ||| Sbjct 1535 CGAGCGTAGTCCTGGGCCCAGCCTACAGCTTCCACATAGTCATCGAACAGGGGCTCACCT 1594 Query 137188 TCGCAGAGCCAAGCAAGGTCCTTGTCCAGCGGCTTGCGCCCGT-CACGACGCAGC--ATC 137244 || || | || || |||||||| || | | || || ||| | || | Sbjct 1595 TCCAGGAAGAAGGCGAGATCCTTGTC---GGGAACGTGAAAGTCCAGGACCCGGCGAGCC 1651 Query 137245 ATCTCCTTG---GCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAG 137301 | ||| | | ||| | ||||||| | || | |||| ||| || |||||| Sbjct 1652 AGCTCTTCGCGCGCCCGGTTGATGAAGTAGGTCCCCACCATGTTTCCGGTTCCACGCGAG 1711 Query 137302 CCCGAGTGGAGCATCACCCAGAC-GCGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGTG 137360 || ||||| | |||||||||||| | | | | || |||||||| | |||||||||||| Sbjct 1712 CCAGAGTGCAACATCACCCAGACATCACCAG-CTTCATCGAGGCACAGCTCGATGAAGTG 1770 Query 137361 GTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTG-GCGTTCTTCAGCGCCGGGT 137419 || ||||| || || || ||||| || || | | ||| | | | | | ||||| Sbjct 1771 ATTTCCGCCCCCAAGCGTTCCCAGCTGCCCCGCAATCTTGTGAGCGC-CGATCTTCGGGT 1829 Query 137420 ACTTCTCGCAGAGCTTGTC---GAACCGCGCCTCCAGGCCCGAATCGACCCACTTGCGCA 137476 ||| || || || | ||||||| | | | | || || || | ||| Sbjct 1830 GCTTGTCCTTGA---TGACCGAGAACCGCTCGGCGATCTCGGAGTCAAC------GAGCA 1880 Query 137477 GGAT--CGAGTTGGGGATGCCGCTGCGCCCGTTCCAGCCGCCCGACGGACCCGGCCCG-- 137532 | | ||| ||||| | || || || | || || | ||||||| Sbjct 1881 TGGTGCCGA----CCGATGCTGGGGC-----ATCGAGATGATCGCCG--CGCGGCCCGTT 1929 Query 137533 -CCGTGCGGGACGGCGTGCTCGATCAGCGAGCGAAGCTTGGACAGGCTGTCGGGAAGGTC 137591 ||| ||||| || |||||||| || | ||| | ||||| ||| || |||| Sbjct 1930 TCCGACAGGGACAGCCCGCTCGATCTCATCACGCACCTTCGCCAGGCCGTCAGGCAGGTT 1989 Query 137592 CGACGCGGTCAGGCTGGTGCGGACCGCCATCATGCCGCAGCCGATGTCGACGCCGACGGC 137651 || ||||||||||| |||| ||||||||| || |||||||| || || ||||| || Sbjct 1990 GTTTGCCGTCAGGCTGGTCCGGATCGCCATCATCCCACAGCCGATATCCACCCCGACCGC 2049 Query 137652 GGCCGGGATGATCGCGCCC 137670 ||||| |||||||||||| Sbjct 2050 AGCCGGAATGATCGCGCCC 2068 >seq8156 Length=952 Score = 271 bits (300), Expect = 1e-67 Identities = 352/484 (73%), Gaps = 13/484 (3%) Strand=Plus/Plus Query 136646 AGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGG 136705 |||| ||||||||||| || || || |||||||| | | || || || || ||||| Sbjct 465 AGCCTTTCACGCAGAGCACCTGTTTCAGGGTGTGCTCCACATCGACAAGTTCGGCCTGGG 524 Query 136706 CCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGT 136765 | |||||||||||||||||||||| ||||||||||| |||| ||||| ||| | || Sbjct 525 CGGCCATGACCGCGTCGATGTCCTTATAGGCCATCGGCGTTTCATCGATGACGTCCTTGT 584 Query 136766 CCTTGCGGCACTCCACGCCCTCGGT---GGCCTTGATCTGGTCCTCCAGGGTGAAGGTCG 136822 ||||||||||||| ||||| ||||| |||| | ||||| ||| ||| |||||| Sbjct 585 CCTTGCGGCACTCGACGCCTTCGGTCGCGGCCCGG---TGGTCGGCCAAGGTAAAGGTCC 641 Query 136823 CCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGT 136882 |||||||| | ||| ||||| ||| || || ||||| ||||| ||| ||| || | Sbjct 642 GCTTGGCCTCGCCCCGGGACATGACCCGCCCGGCCCCGTGGGAGCAGGAGTGGAAGGACT 701 Query 136883 CCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCC 136942 | ||||||||||| ||||||||| | ||| || ||||||||||| || ||||| | Sbjct 702 GGTCGTTGCCCTTGCCCCGCACGATGAATGACCGCGCGCCCATCGAGCCCGGAATGATGC 761 Query 136943 CGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGA 137002 | | | |||| | ||| ||| || ||||| ||||||| | || || ||| Sbjct 762 CCAGGTCACCCTTGCGGGCCCGCACGGCCCCCTTCCGGGTCAGCCACACATTGGCGCCGA 821 Query 137003 AGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGA 137062 ||||| ||| | || |||||||||||||||||||||||||| || ||||| Sbjct 822 AGTGGTTCTCCCGCGCCACATAGTTGTGGTGGCAGTTCACCGCTTCTTTCGAGAGCTTGA 881 Query 137063 ACGGCGGCAGGCCCGACGC--CCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCG 137120 || | |||| || || ||||| || ||||| || ||| |||||||| ||| || Sbjct 882 ACCGGGGCA-----GATGCTTGCGCATCGCGTCCAGCACGCGGCTCATCATCACCTCCCG 936 Query 137121 GTTG 137124 |||| Sbjct 937 GTTG 940 >seq13808 Length=625 Score = 123 bits (136), Expect = 3e-23 Identities = 269/393 (68%), Gaps = 16/393 (4%) Strand=Plus/Plus Query 86312 ATTTCCGGGTGGCTGATGTCCAGATAGACGGCGTTGGAGCCCCGGCGCGTGCCGCCTTGG 86371 ||||||||||| ||||||||||||| | || |||||||||||| ||||||| Sbjct 22 ATTTCCGGGTGATCGATGTCCAGATAGGCCGCAGCCGAGCCCCGGCGCAGCGAGCCTTGG 81 Query 86372 CTGACGGCGAGAATCAGGCGATCGTCCACCGCC---ATGAACGGGATCACGCCGGTCGAC 86428 | || || | || ||| ||||| | | ||||| || || | ||| | || | Sbjct 82 GAAATCGCCAGGGTGAG-CGA--GTCCATCACGCGGATGAAAGGAATGATGCCCGACGTC 138 Query 86429 TGCGAACCCTTC-GA--GGTCTTCTCGCCCAGGCCGCGCAGGGCGCCGTAATAGGAGCCG 86485 || || ||| || | ||||||||| | ||||| |||| | |||| |||| Sbjct 139 TGG---CCATTCTGACCGACCTTCTCGCCGATAGAGCGCACACCGCCCCAGTAGGTGCCG 195 Query 86486 ATGCCGCCGCCCATCGACGAGAGCCAGATGACCTC-GTCATAGTGCTCG-GAGATCGACT 86543 |||||||| || | || | ||||||| ||| ||| |||| | || ||| | Sbjct 196 ATGCCGCCACCGTTGGAGGCCAGCCAGACATTCTCTGTCCAGGTGCCCACGATGTCGTCC 255 Query 86544 CGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGGCAGGCCGCGCGCGGACCCGC 86603 ||| | | | | || | | | ||||||||||||||||||||||||| | | |||| Sbjct 256 AGCGAAT--CGTGAACCGAGTTCAAGAAGCAGGAGATCGGCAGGCCGCGCTCTGCGCCGC 313 Query 86604 CGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAGAGCC 86663 | || ||||| | ||||| || ||||||||| |||||||| | ||||| || || | Sbjct 314 CATTGGACAGGACCGGCGTTGCCGGCATGAACCACAGGTTCGACATGTAGTCATAAAGGC 373 Query 86664 GCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCG 86696 ||||| |||||||| || || || |||||| Sbjct 374 GCTGGGCGTGCTCGATATCGTCGGCATAGGCCG 406 >seq7 Length=75526 Score = 104 bits (114), Expect = 3e-17 Identities = 362/560 (65%), Gaps = 30/560 (5%) Strand=Plus/Plus Query 84504 GGCCCAGTTCACCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACA 84563 ||||| ||| ||||| |||| |||| |||||| || | |||||| || | Sbjct 20119 GGCCCTTTTCTTCCAGGAGCTTGGTCAGGTGACGGTTCCGCACATTGTGCGAGCCAGAGA 20178 Query 84564 GGGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCTCCGC 84623 | |||||||| ||| ||||||| | ||| ||||| || | ||| ||||| |||| Sbjct 20179 GCGTCTTGTGGGTAAAGCTGTTGGCTGCGATGGGCTCAATGCCTGCCGACGTGCCACCGC 20238 Query 84624 AGAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCG 84683 | | ||||||| || ||| | || ||||| || ||||| || ||| ||||| | Sbjct 20239 AAATGATCGAGATGGACGCGGTTGGTGCCACAGCTGACTTGTTGGAGAAGCGCTC---CA 20295 Query 84684 TGCCTTCCAT-GTCCGGCGCCTCG---------CCGCGCTCCTTGCCCAGCAGCAGGGAA 84733 || | |||| ||| | ||| ||| || ||||| | ||||| | || Sbjct 20296 TGA-TGCCATAGTCTGCCGCATCGGGACATGCGCCCCGCTCTTCCGCCAGCTTCTTTGAG 20354 Query 84734 GCCGCGTCGGCCTGCTTGCGCATGTGGGCGAACAGTTCCAGGTTCAGCCGGCGGGCGGCG 84793 ||||| || ||||| | || || ||| | | | |||| | | | || | Sbjct 20355 GCCGCATCTGCCTGGTCATCAATATGCTTGAAGATCTTCTTGTTC--CAGACCTTCGCCA 20412 Query 84794 TGACTC--TCGAACGGGAT------GTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCA 84845 | || | || |||||||| | || |||| | || ||||||||||| | | Sbjct 20413 TCACACCTTCAAACGGGATCATGTTGGCCTGCAT-----GAAG-GAGTGGAAGCCCATAA 20466 Query 84846 GGCCCAGGCCCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCG 84905 ||| |||||||| || |||||||||| ||| || ||| || ||| ||||| | Sbjct 20467 CGCCAAGGCCCACAGAACGTTCGCGCATGGCAGAATATTTGGCCTGGGCCATTTCGTCTG 20526 Query 84906 GCGCGTTGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGA 84965 | ||| |||||| || |||| ||| ||||| || | ||||| || |||||||| | Sbjct 20527 GTGCGCGGTCGATAAAGTCCTGAAGGACATTGTCGAGGAAGCGCATCACATCTTCGATAA 20586 Query 84966 AGGTCGGGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGA 85025 | ||| || ||| ||| | ||||||| || | | |||||| ||||||| Sbjct 20587 ACTGCGGATGGCTTTCCCATTCCTGGAACTTCTCAATATTCAAGGAGGAGAGACAGCAGA 20646 Query 85026 CGGCGGTCCGCATCTTGCCG 85045 | ||||| || ||||||| Sbjct 20647 CCGCGGTGCGTGCCTTGCCG 20666 >seq3894 Length=1582 Score = 98.7 bits (108), Expect = 1e-15 Identities = 220/324 (68%), Gaps = 10/324 (3%) Strand=Plus/Plus Query 83574 TACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTCGGGC 83633 || |||||||| | |||| ||||||| || | ||||||| ||||||| |||||| Sbjct 1005 TAGTCGTGCTTGGCCGCCATCTCCTCGTACTCCATGAAGGCGGAGAACTCGGTGTCGGGC 1064 Query 83634 AGGCCCAGGGTGTCGATCAGCGTCGAGTAGGCGTCGATGTGGTTGGCCTCGGCGGCGATG 83693 | ||| | || || | || || ||||||| ||||||| | ||| | | | Sbjct 1065 ATGCCGATCGTCTCAAGCAATAGCGCGTAGGCGGCGATGTGAACCGTCTCCATGTTGGAG 1124 Query 83694 AACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAGCGCGGGCCGTACTTCTCGAAG 83753 || || ||||||||| |||||||| || |||| |||| ||| || || | | Sbjct 1125 AAGGCCGACAGCATCATGCGCACTTCAACCGGCTTGAAGAGCGGCATGTAGTTTTCCATG 1184 Query 83754 TAGCCGCGCGCC-ACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCAGCAG 83812 ||| ||||| || || ||||| | |||||||||||| ||||| | || |||||||| Sbjct 1185 TAGTTA-GCGCCGACTTCCACGTCCGACTGGGTGAAGAAGCGGAAAATCTGGGTCAGCAG 1243 Query 83813 ---GGACTTCTCGTCCGGCGTCAGCTT-CTCGTTCCAGTCCTGGATGTCCTGGTCCATGG 83868 | || || ||| |||||||| ||| |||||||| | ||||| | | | Sbjct 1244 ATTGCGCTCCTTGTC---GGTCAGCTTGGTCG-CCCAGTCCTTGCAGTCCTCACCGAGCG 1299 Query 83869 GGGCTTCGTGCGGAAGCCAGTGCA 83892 | | || | ||| |||||||||| Sbjct 1300 GCACCTCTTCCGGCAGCCAGTGCA 1323 >seq3432 Length=1729 Score = 86.0 bits (94), Expect = 9e-12 Identities = 68/81 (84%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 103782 ACGCGGGGTAGAGGAGTCCGGTTGTCCTCGTCTGGCTCATAACCAGGAGATCGTGGGTTC 103841 ||||||| | ||| |||||||| | |||||| ||||||||||| | || |||| ||||| Sbjct 1057 ACGCGGGATGGAGCAGTCCGGTAG--CTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTC 1000 Query 103842 AAATCCCACTCCCGCTCCCAA 103862 |||||| |||||||| ||||| Sbjct 999 AAATCCTACTCCCGCACCCAA 979 >seq1053 Length=4254 Score = 86.0 bits (94), Expect = 9e-12 Identities = 188/279 (67%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 145498 CGGGCTTCTGGTAGAAGCGCTCGGGCAGGCCGTCGATCTGCTCGACGTTGAACACCAGAT 145557 ||||||| |||| || | ||||||||||| |||||||| |||||||||||||| | Sbjct 4080 CGGGCTTGGTGTAGTAGTGATCGGGCAGGCCTTCGATCTGTTCGACGTTGAACACTGTGT 4021 Query 145558 AGGACTTCAGGAACGGGATCATCCGCTCGACGTCCTTGCCGTTGGCGTCCTTCTCGGTCT 145617 | | ||||| ||| ||||| | || || | || | |||| || | || || |||| Sbjct 4020 AAGCCTTCATGAAGGGGATTTTGCGTTCCTCTTCGCTCCCGTCTGCTTGCTCTTCAGTCT 3961 Query 145618 TCTTGAACTTCGAGGCGTAGACGATCAGTTCGGACTTCTCGCCCTTGCGGACCTGACCAC 145677 | ||| | ||| || || | | | | ||| ||||| || ||| | ||| Sbjct 3960 TGGTGACGGTGTTGGCATAAACAACGGGGTTGCCCTTTTCGCCTTTCTTGACATTTGCAC 3901 Query 145678 CCAGGTCCCTGGCTTGGTTGTAGGTCATCCAGGTCGG-GTTGGTGTAGCCGCGCTCCTGG 145736 | || || |||| || ||| | ||||||||| ||| | || | |||| ||| || Sbjct 3900 CAAGCTCTTTGGCCTGTTTGAATGTCATCCAGTACGGCGATGAAAAACCCGC-CTCTAGG 3842 Query 145737 GCGGCGGCCCACAGGAGGACCACGTTGATCCCGGTGTAG 145775 ||||| ||||||| | || | || |||||| | ||| Sbjct 3841 GCGGCACCCCACAGCATGAGGATATTAATCCCGCTATAG 3803 >seq781 Length=5346 Score = 84.2 bits (92), Expect = 3e-11 Identities = 163/235 (69%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 90046 CTTGCCTTCGCGCGCCAGGGTCGACAGGTGGATGATCGGATTGTCCTGGGCCTGCCGGTG 90105 || ||| |||||||||| || | || | ||||||| | | || ||||| || || Sbjct 609 CTGGCCCTCGCGCGCCATTGTGGCCAAGCGGATGATGGCGCTCTCGGATGCCTGTCGATG 668 Query 90106 GATTTCCGACAGGAAGAAGTCCGGATC---ATTGGCCAGCAGGCCCGCGTCGTCCTCGAC 90162 ||| || | ||| | | |||||||| ||||| | |||||| |||| ||| || Sbjct 669 GATCTCGGTCAGCATCACATCCGGATCGACATTGGTGA--AGGCCC-CGTCTCCCTTGAT 725 Query 90163 CGGCGGAAGCTGACCAGGATCGCCCATGGCGAAGATCGGCACCCCGTATTCCATGAGGTC 90222 ||| ||||||||||| ||||| |||| | | ||| || | | ||| ||||| Sbjct 726 CGGGGGAAGCTGACCGGGATCACCCAGCACAAGGATGGGTTTTTTGAAACTCATCAGGTC 785 Query 90223 GTCGGTCATC-CGGCGCCCGACCATGGACGCCTCGTCGACGACGATCAGGCTCGC 90276 | | |||| | ||||| ||||||||| ||||||||| |||||||| || || Sbjct 786 GCGCGCCATCTCCTCGCCC-ACCATGGACACCTCGTCGAGCACGATCAGCCTGGC 839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690000993536400