Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq1156 280 3e-70 seq8156 235 1e-56 seq3220 104 4e-17 seq10958 102 1e-16 seq2115 100 5e-16 seq7291 95.1 2e-14 seq5828 95.1 2e-14 seq781 95.1 2e-14 seq230 95.1 2e-14 seq3432 91.5 3e-13 seq3171 91.5 3e-13 seq15071 86.0 1e-11 seq15 86.0 1e-11 >seq1156 Length=3943 Score = 280 bits (310), Expect = 3e-70 Identities = 382/527 (72%), Gaps = 7/527 (1%) Strand=Plus/Plus Query 168273 CCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCTGGGCC 168332 ||||| || || | ||||| ||||| ||| ||| | |||||||| || ||| ||| Sbjct 1059 CCCTTCACACAGACAACCTGTTTGAGCGTGTGGACCACCTCCACCAGATCGGTCTGCGCC 1118 Query 168333 GCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTTCGTCC 168392 ||||||||| ||||| |||||| ||| |||||||| ||||| ||||||| ||| Sbjct 1119 GCCATGACGGTGTCGATATCCTTGTAGGCCGCAGGCGTCTCATCGATGACGCCTTGGTCT 1178 Query 168393 TTGCGGCACTCGACGCCCTTC-GTGGCTTCGACGTGCTCGTCCAGGGAGACGAGCTTCTT 168451 || ||||| ||||| |||||| ||||||| | ||| ||| | || | || | | ||| Sbjct 1179 TTACGGCATTCGAC-CCCTTCTGTGGCTTTGCGGTGATCGCCAAGCGTGAAGGTCCGCTT 1237 Query 168452 CGCCGCCGAACGCGACATGACGCGGCCGGCGCCGTGGCTGCACGAGCAGAAGGCGTCAGC 168511 || | | || ||||| || || || || ||| ||| ||||||||| ||||| Sbjct 1238 GGCTTCAGTCCGGGACATCTT-CGCCCCGCCCCATGGGAGCAGGAGCAGAAGCTGTCAGA 1296 Query 168512 GTGGCCCTTGCCGCGCACGATGAACGACTTGGCGCCCATCGAACCCGGAATGATGCCGAG 168571 ||||||||||||||||||||||| |||||||| |||||||| || ||||| || || || Sbjct 1297 CTGGCCCTTGCCGCGCACGATGAAGGACTTGGCCCCCATCGACCCGGGAATAATCCCCAG 1356 Query 168572 TTCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGATGTCCTCGCCGAAGTG 168631 || ||| |||| || || || ||||||||||||| ||| || | || ||||| Sbjct 1357 CTCACCCTCGCGCGCAGAGACGGCCCCCTTGCGGGTCAGCCAGACTTCGGCCCCAAAGTG 1416 Query 168632 GCGTTCCTTGTTGACGTAGTTGTGGTGACAGTTCACCGCTTCCTTGTCGGTCTTGAAC-- 168689 | || | || ||||||||||| || ||||| || |||||||||||||||| Sbjct 1417 ATGCTCACGCTGCACATAGTTGTGGTGGCAATTCACGGCCGACTTGTCGGTCTTGAACTT 1476 Query 168690 GCCGGCACGAACTCCCGGATCGCCTTGAGCACGCGGACCATCATCATGTCGCGGTTCAGG 168749 ||| || || || |||||| | | || ||| ||||||| || || |||||| Sbjct 1477 GCC--CAGCGTCTTACGCATCGCCATCAAAACCCGGGCCATCATGGCTTCCCGATTCAGG 1534 Query 168750 CGCGCGAAGTCTTGCGCCCAGCCCACGGCTTCGATGTAGTCGTCGAA 168796 || ||| |||| || |||||||| || ||||| | ||||| ||||| Sbjct 1535 CGAGCGTAGTCCTGGGCCCAGCCTACAGCTTCCACATAGTCATCGAA 1581 >seq8156 Length=952 Score = 235 bits (260), Expect = 1e-56 Identities = 336/473 (71%), Gaps = 0/473 (0%) Strand=Plus/Plus Query 168273 CCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCTGGGCC 168332 || || ||||| | |||||| || |||||| | | || || | ||| ||||||| Sbjct 467 CCTTTCACGCAGAGCACCTGTTTCAGGGTGTGCTCCACATCGACAAGTTCGGCCTGGGCG 526 Query 168333 GCCATGACGAGTTCGATCGGCTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTTCGTCC 168392 |||||||| ||||| ||| || ||| ||||||| || ||||| ||| | | |||| Sbjct 527 GCCATGACCGCGTCGATGTCCTTATAGGCCATCGGCGTTTCATCGATGACGTCCTTGTCC 586 Query 168393 TTGCGGCACTCGACGCCCTTCGTGGCTTCGACGTGCTCGTCCAGGGAGACGAGCTTCTTC 168452 ||||||||||||||||| | || || | ||| ||| ||| || | | | ||| Sbjct 587 TTGCGGCACTCGACGCCTTCGGTCGCGGCCCGGTGGTCGGCCAAGGTAAAGGTCCGCTTG 646 Query 168453 GCCGCCGAACGCGACATGACGCGGCCGGCGCCGTGGCTGCACGAGCAGAAGGCGTCAGCG 168512 ||| | || |||||||| || ||||| |||||| ||| ||| ||||| | || Sbjct 647 GCCTCGCCCCGGGACATGACCCGCCCGGCCCCGTGGGAGCAGGAGTGGAAGGACTGGTCG 706 Query 168513 TGGCCCTTGCCGCGCACGATGAACGACTTGGCGCCCATCGAACCCGGAATGATGCCGAGT 168572 | ||||||||| ||||||||||| ||| ||||||||||| |||||||||||||| || Sbjct 707 TTGCCCTTGCCCCGCACGATGAATGACCGCGCGCCCATCGAGCCCGGAATGATGCCCAGG 766 Query 168573 TCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGATGTCCTCGCCGAAGTGG 168632 || |||| | ||| ||| || ||||| ||||||| | | | ||||||||||| Sbjct 767 TCACCCTTGCGGGCCCGCACGGCCCCCTTCCGGGTCAGCCACACATTGGCGCCGAAGTGG 826 Query 168633 CGTTCCTTGTTGACGTAGTTGTGGTGACAGTTCACCGCTTCCTTGTCGGTCTTGAACGCC 168692 ||| || ||||||||||| |||||||||||||| || | ||||||| Sbjct 827 TTCTCCCGCGCCACATAGTTGTGGTGGCAGTTCACCGCTTCTTTCGAGAGCTTGAACCGG 886 Query 168693 GGCACGAACTCCCGGATCGCCTTGAGCACGCGGACCATCATCATGTCGCGGTT 168745 |||| || || ||||| | ||||||||| |||||||| || ||||| Sbjct 887 GGCAGATGCTTGCGCATCGCGTCCAGCACGCGGCTCATCATCACCTCCCGGTT 939 >seq3220 Length=1795 Score = 104 bits (114), Expect = 4e-17 Identities = 148/206 (72%), Gaps = 2/206 (1%) Strand=Plus/Minus Query 120321 CGCGCCAGCGTAGCGAGGCGGATGATCGGGTTGTCGGCGGCTTGGCGGTGGATTTCGGTC 120380 ||||||| || || || || | ||||||| |||| || || || ||||||||||| ||| Sbjct 665 CGCGCCATGGTGGCCAGACGCAGGATCGGGCTGTCCGCCGCCTGACGGTGGATTTCTGTC 606 Query 120381 AGGAAGAAGTCGGGATCGCCGGCCGTCAGCCCCGG-CTTGTCGCCGACCGGCGGAAGCTG 120439 || | || ||| || || | | || | | || ||||| |||||||| | || Sbjct 605 AGCATGACGTCAGGCTCCGCATCGGTGAAAAAAGCTCTCCTCGCCAACCGGCGGCAATTG 546 Query 120440 ACCGGGATCGCCCATCGCCAGGATCGGCACGCCGAACGACATCAGGTCTTTCGCCATGTC 120499 ||||||||||||| | ||||||||||| ||| || | || ||||| | ||||| | Sbjct 545 CCCGGGATCGCCCAGCACCAGGATCGGCTTGCCAAAGGCCAGAAGGTCCTCAGCCAT-TG 487 Query 120500 GAAGCCGACCATCGACGCCTCGTCGA 120525 ||| |||||||| ||||||||| Sbjct 486 CCTGCCCACCATCGAAACCTCGTCGA 461 >seq10958 Length=765 Score = 102 bits (112), Expect = 1e-16 Identities = 174/249 (70%), Gaps = 4/249 (2%) Strand=Plus/Minus Query 110917 CCGGTCGAGCCGAAGCCGCCCGTGCCACGCTCGGTCTGGTCAAGCTCCGCAACGACGTCG 110976 ||||||||||| |||||||| ||||| |||||||| | || || | || |||| Sbjct 249 CCGGTCGAGCCAAAGCCGCCAGTGCCGCGCTCGGTTTCATCGAGGGTGTCGACTTCGTCC 190 Query 110977 AA-ACGGATGCGGACATAG-GGCGCGAAGACGGCCTGGGCAATGCGGTCGCCGCGATTGA 111034 | || | | || | ||||||| ||| |||||| ||||| || ||||| | || Sbjct 189 CACACCGC--CTGAATGACCGGCGCGATGACCATCTGGGCGATGCGTTCACCGCGCTGGA 132 Query 111035 TGACGAACGGATTGCGGCCGTGGTTGATCAGGATCACCTTGATCTCGCCGCGATAGTCGC 111094 | |||||||| | |||||| || || ||| ||||| | ||| ||||||||||||| Sbjct 131 TCACGAACGGCTCCTTGCCGTGATTAATGAGGTTCACCCGCAGCTCACCGCGATAGTCGC 72 Query 111095 TGTCGACGGTACCGGGCGAATTCAGGACAGTGATAGACGACTTGGCGGCGAGGCCCGAGC 111154 | || || || || |||| || | | | || | |||||| || ||||| |||| Sbjct 71 TATCCACCGTGCCCGGCGTGTTGACGCAGGAAATGCCCTTCTTGGCCGCCAGGCCGGAGC 12 Query 111155 GCGGCCGGA 111163 |||| |||| Sbjct 11 GCGGGCGGA 3 >seq2115 Length=2451 Score = 100 bits (110), Expect = 5e-16 Identities = 72/83 (87%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 |||||||||||||||||| |||||||||||| ||||||||||| ||||||| ||||| Sbjct 700 TGATGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTC 759 Query 133019 AAATCCCTCCCCCGCATCCACAA 133041 |||||| |||||||| ||| || Sbjct 760 AAATCCTACCCCCGCACCCAAAA 782 >seq7291 Length=1027 Score = 95.1 bits (104), Expect = 2e-14 Identities = 70/82 (85%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 132957 TTTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGT 133016 |||| |||||||||||||| |||||||||||| ||||||||||| ||||||| ||| Sbjct 60 TTTGGCGCGGGGTGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGT 119 Query 133017 TCAAATCCCTCCCCCGCATCCA 133038 |||||||| |||||||| ||| Sbjct 120 TCAAATCCTACCCCCGCAACCA 141 >seq5828 Length=1192 Score = 95.1 bits (104), Expect = 2e-14 Identities = 67/77 (87%), Gaps = 0/77 (0%) Strand=Plus/Minus Query 132957 TTTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGT 133016 |||||||||||||||||||||| |||||||||| ||||||||||| ||||||| ||| Sbjct 405 TTTGATGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGT 346 Query 133017 TCAAATCCCTCCCCCGC 133033 || ||||| ||||||| Sbjct 345 TCGAATCCAGCCCCCGC 329 >seq781 Length=5346 Score = 95.1 bits (104), Expect = 2e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Plus Query 120315 CCCTGACGCGCCAGCGTAGCGAGGCGGATGATCGGGTTGTCGGCGGCTTGGCGGTGGATT 120374 |||| ||||||| || || | ||||||||| | | | |||| || || || ||||| Sbjct 613 CCCTCGCGCGCCATTGTGGCCAAGCGGATGATGGCGCTCTCGGATGCCTGTCGATGGATC 672 Query 120375 TCGGTCAGGAAGAAGTCGGGATCGCCGGCCGTCA--GCCCCGGCTTGTCGCCGACCGGCG 120432 |||||||| | | || |||||| | || | |||||| || | || ||| | Sbjct 673 TCGGTCAGCATCACATCCGGATCGACATTGGTGAAGGCCCCGTCTC--CCTTGATCGGGG 730 Query 120433 GAAGCTGACCGGGATCGCCCATCGCCAGGATCGGCACGCCGAACGACATCAGGTCTTTCG 120492 |||||||||||||||| |||| | | ||||| || ||| ||||||||| || Sbjct 731 GAAGCTGACCGGGATCACCCAGCACAAGGATGGGTTTTTTGAAACTCATCAGGTCGCGCG 790 Query 120493 CCATGTCGAAGCCGACCATCGACGCCTCGTCGACGACGAT 120532 |||| || ||| ||||| ||| ||||||||| ||||| Sbjct 791 CCATCTCCTCGCCCACCATGGACACCTCGTCGAGCACGAT 830 >seq230 Length=12125 Score = 95.1 bits (104), Expect = 2e-14 Identities = 125/171 (73%), Gaps = 2/171 (1%) Strand=Plus/Plus Query 71166 TCGAGATCGTGCCCTTCGAGTTCATGCGCGGGCGCACCTTCGACAACGCCTTCGTGATCC 71225 |||| |||| ||| ||| |||||||||||| || || | ||| ||||||||| | | Sbjct 10581 TCGAAATCGCGCCGCTCGCGTTCATGCGCGGTCGGACGCTGTCCAATGCCTTCGTGGTTC 10640 Query 71226 TCGACGAGGCTCAGAACGCGTCGTTCGACG-ACCTGGAACTGTTCGTGACCCGTACCGGT 71284 | |||||||| |||||||| || |||| | | || | ||||| |||||||| ||| Sbjct 10641 TGGACGAGGCGCAGAACGCCACG-TCGATGCAGATGAAGATGTTCCTGACCCGTCTCGGC 10699 Query 71285 CAGGGTTCGCAAGTCGTGATCTGCGGCGATCCCGGCCAGATCGACATCCCG 71335 | ||||||| | |||||| ||| || | | |||||||||| | ||| Sbjct 10700 GAAGGTTCGCGCATGGTGATCACCGGTGACCGCACCCAGATCGACCTGCCG 10750 >seq3432 Length=1729 Score = 91.5 bits (100), Expect = 3e-13 Identities = 68/80 (85%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 ||| ||||| ||||||||||||||||||||| ||||||||||| ||||||| ||||| Sbjct 1059 TGACGCGGGATGGAGCAGTCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTC 1000 Query 133019 AAATCCCTCCCCCGCATCCA 133038 |||||| | |||||| ||| Sbjct 999 AAATCCTACTCCCGCACCCA 980 >seq3171 Length=1826 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/202 (71%), Gaps = 6/202 (3%) Strand=Plus/Plus Query 185848 CCGACTACTACATCATCGGCGGCATCACCGAGGTGAACTACAACATCCGCTCGGGCGGCG 185907 ||||||||| ||| ||||||||||||| ||| | || ||||| |||| ||| || ||| Sbjct 455 CCGACTACTTTATCGTCGGCGGCATCACGGAGCTCAATTACAATATCCACTCCGGTGGCA 514 Query 185908 GCAAGGTCGGCGTCTCGAACATCTACGGCGGCAAG---CGTACGTACACGATGAACGTCG 185964 | ||| || || | || | ||||||||| ||| | |||| | ||||| | Sbjct 515 TCGAGG-CGACG--GTGGACGGCATTGGCGGCAAGGGCCGTGTATTCACGGTCAACGTTG 571 Query 185965 CGGCCGATCTGAAGATCGTCGAAACCAAGTCGCTGAAGGTCGTCAAGACCATCAGCGTCC 186024 | | ||||||| ||||||||||||| ||||||| |||| | || |||| | | Sbjct 572 CTGTCGATCTGCGGATCGTCGAAACCCAGTCGCTTGAGGTTAAGCACACGGCCAGCCTGC 631 Query 186025 AGAAGCAAATCACGGGCTACGA 186046 ||||||| || || || || || Sbjct 632 AGAAGCAGATTACCGGTTATGA 653 >seq15071 Length=564 Score = 86.0 bits (94), Expect = 1e-11 Identities = 70/85 (82%), Gaps = 0/85 (0%) Strand=Plus/Minus Query 132957 TTTGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGT 133016 |||| ||||| |||||||| |||||||||||| ||||||||||| ||||||| ||| Sbjct 85 TTTGGCGCGGGATGGAGCAGCCCGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTAGGT 26 Query 133017 TCAAATCCCTCCCCCGCATCCACAA 133041 |||||||| | |||||| ||| || Sbjct 25 TCAAATCCTACTCCCGCAACCAAAA 1 >seq15 Length=59725 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 ||| |||||||||||||||| |||||||||| ||||||||||| |||||| ||||| Sbjct 25294 TGACGCGGGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCATAGGTTC 25353 Query 133019 AAATCCCTCCCCCGCATCCA 133038 |||||| ||||||| ||| Sbjct 25354 AAATCCTATCCCCGCAACCA 25373 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895580786004840