Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq1156 349 5e-91 seq8156 268 1e-66 seq3894 134 2e-26 seq13808 129 8e-25 seq7 104 3e-17 seq3432 86.0 9e-12 seq781 84.2 3e-11 >seq1156 Length=3943 Score = 349 bits (386), Expect = 5e-91 Identities = 713/1040 (69%), Gaps = 47/1040 (5%) Strand=Plus/Plus Query 135408 CCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGCC 135467 |||||||| |||| || || ||||| |||||||| | ||||| || || |||| ||| Sbjct 1059 CCCTTCACACAGACAACCTGTTTGAGCGTGTGGACCACCTCCACCAGATCGGTCTGCGCC 1118 Query 135468 TCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCC 135527 ||||||| | |||||| |||||||||||| || | || ||||| ||||| ||| Sbjct 1119 GCCATGACGGTGTCGATATCCTTGTAGGCCGCAGGCGTCTCATCGATGACGCCTTGGTCT 1178 Query 135528 TTACGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGGTCGCCTTG 135587 |||||||| || || || || ||||| ||| || || | || ||||||||| |||| Sbjct 1179 TTACGGCATTCGACCCCTTCTGTGGCTTTGCGGTGATCGCCAAGCGTGAAGGTCCGCTTG 1238 Query 135588 GCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCCGCA 135647 || | ||||| |||||| | || ||||| || || ||||| |||||||| ||| | Sbjct 1239 GCTTCAGTCCGGGACATC-TTCGCCCCGCCCCATGGGAGCAGGAGCAGAAGCTGTCAGAC 1297 Query 135648 TTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCCGAAC 135707 | ||||||||||||||||||| ||||||||||||||||||| ||||| || ||||| | | Sbjct 1298 TGGCCCTTGCCGCGCACGATGAAGGACTTGGCCCCCATCGACCCGGGAATAATCCCCAGC 1357 Query 135708 TGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGG 135767 | ||| |||| || || || ||||||||||||| |||| | | ||||| Sbjct 1358 TCACCCTCGCGCGCAGAGACGGCCCCCTTGCGGGTCAGCCAGACTTCGGCCCCAAAGTGA 1417 Query 135768 AATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGC 135827 || ||| || |||||||||||||| ||||| || |||||| ||||||||| Sbjct 1418 TGCTCACGCTGCACATAGTTGTGGTGGCAATTCACGGCCGACTTGTCGGTCTTGAACTTG 1477 Query 135828 GGCAGGCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATC 135887 ||| || | ||||| ||| || |||||| ||||||| || || || | Sbjct 1478 CCCAG---CGTCTTACGCATCGCCATCAAAACCCGGGCCATCATGGCTTCCCGATTCAGG 1534 Query 135888 CGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGTTCGCCT 135947 || ||| |||||||| ||||| | || |||||||| ||||| | |||| || || ||| Sbjct 1535 CGAGCGTAGTCCTGGGCCCAGCCTACAGCTTCCACATAGTCATCGAACAGGGGCTCACCT 1594 Query 135948 TCGCAGAGCCAAGCAAGGTCCTTGTC--CAGCG-GCTTGCGCCCGTCACGCCGCAGCATC 136004 || || | || || |||||||| | || | | | | | || || ||| | Sbjct 1595 TCCAGGAAGAAGGCGAGATCCTTGTCGGGAACGTGAAAGTCCAGGACCCGGCG-AGC--C 1651 Query 136005 ATCTCCTTG---GCCTTCTCGATGAAGATACG-GCCGATGGTGTTGCCGACGCCGCGCGA 136060 | ||| | | ||| | ||||||| || | || | |||| ||| || ||||| Sbjct 1652 AGCTCTTCGCGCGCCCGGTTGATGAAG-TAGGTCCCCACCATGTTTCCGGTTCCACGCGA 1710 Query 136061 GCCCGAGTGGAGCATCACCCAGAC-GCGCTGGTCCTCGTCGAGGCAGACCTCGATGAAGT 136119 ||| ||||| | |||||||||||| | | | | || |||||||| | ||||||||||| Sbjct 1711 GCCAGAGTGCAACATCACCCAGACATCACCAG-CTTCATCGAGGCACAGCTCGATGAAGT 1769 Query 136120 GGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTG-GCGTTCTTCAGCGCCGGG 136178 | || ||||| || || || ||||| || || | | ||| | | | | | |||| Sbjct 1770 GATTTCCGCCCCCAAGCGTTCCCAGCTGCCCCGCAATCTTGTGAGCGC-CGATCTTCGGG 1828 Query 136179 TACTTCTCGCAGAGCTTGTC---GAACCGCGCCTCCAGGCCCGAGTCGACCCACTTGCGC 136235 | ||| || || || | ||||||| | | | | ||||| || | || Sbjct 1829 TGCTTGTCCTTGA---TGACCGAGAACCGCTCGGCGATCTCGGAGTCAAC------GAGC 1879 Query 136236 AGGAT--CGAGTTGGGGATGCCGCTGCGCCCGTTCCAGCCGCCCGACGGACCCGGCCCG- 136292 | | | ||| ||||| | || || || | || || | ||||||| Sbjct 1880 ATGGTGCCGA----CCGATGCTGGGGC-----ATCGAGATGATCGCCG--CGCGGCCCGT 1928 Query 136293 --CCGTGCGGGACGGCGTGCTCGATCAGCGAGCGAAGCTTGGACAGGCTGTCGGGAAGGT 136350 ||| ||||| || |||||||| || | ||| | ||||| ||| || |||| Sbjct 1929 TTCCGACAGGGACAGCCCGCTCGATCTCATCACGCACCTTCGCCAGGCCGTCAGGCAGGT 1988 Query 136351 CCGACGCGGTCAGGCTGGTGCGGACCGCCATCATGCCGCAGCCGATGTCGACGCCGACGG 136410 || ||||||||||| |||| ||||||||| || |||||||| || || ||||| | Sbjct 1989 TGTTTGCCGTCAGGCTGGTCCGGATCGCCATCATCCCACAGCCGATATCCACCCCGACCG 2048 Query 136411 CGGCCGGGATGATCGCGCCC 136430 | ||||| |||||||||||| Sbjct 2049 CAGCCGGAATGATCGCGCCC 2068 >seq8156 Length=952 Score = 268 bits (296), Expect = 1e-66 Identities = 351/484 (73%), Gaps = 13/484 (3%) Strand=Plus/Plus Query 135406 AGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGG 135465 |||| ||||||||||| || || || |||||||| | | || || || || ||||| Sbjct 465 AGCCTTTCACGCAGAGCACCTGTTTCAGGGTGTGCTCCACATCGACAAGTTCGGCCTGGG 524 Query 135466 CCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGT 135525 | |||||||||||||||||||||| ||||||||||| |||| ||||| ||| | || Sbjct 525 CGGCCATGACCGCGTCGATGTCCTTATAGGCCATCGGCGTTTCATCGATGACGTCCTTGT 584 Query 135526 CCTTACGGCACTCCACGCCCTCGGT---GGCCTTGATCTGGTCCTCCAGGGTGAAGGTCG 135582 |||| |||||||| ||||| ||||| |||| | ||||| ||| ||| |||||| Sbjct 585 CCTTGCGGCACTCGACGCCTTCGGTCGCGGCCCGG---TGGTCGGCCAAGGTAAAGGTCC 641 Query 135583 CCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGT 135642 |||||||| | ||| ||||| ||| || || ||||| ||||| ||| ||| || | Sbjct 642 GCTTGGCCTCGCCCCGGGACATGACCCGCCCGGCCCCGTGGGAGCAGGAGTGGAAGGACT 701 Query 135643 CCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCC 135702 | ||||||||||| ||||||||| | ||| || ||||||||||| || ||||| | Sbjct 702 GGTCGTTGCCCTTGCCCCGCACGATGAATGACCGCGCGCCCATCGAGCCCGGAATGATGC 761 Query 135703 CGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGA 135762 | | | |||| | ||| ||| || ||||| ||||||| | || || ||| Sbjct 762 CCAGGTCACCCTTGCGGGCCCGCACGGCCCCCTTCCGGGTCAGCCACACATTGGCGCCGA 821 Query 135763 AGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGA 135822 ||||| ||| | || |||||||||||||||||||||||||| || ||||| Sbjct 822 AGTGGTTCTCCCGCGCCACATAGTTGTGGTGGCAGTTCACCGCTTCTTTCGAGAGCTTGA 881 Query 135823 ACGGCGGCAGGCCCGACGC--CCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCG 135880 || | |||| || || ||||| || ||||| || ||| |||||||| ||| || Sbjct 882 ACCGGGGCA-----GATGCTTGCGCATCGCGTCCAGCACGCGGCTCATCATCACCTCCCG 936 Query 135881 GTTG 135884 |||| Sbjct 937 GTTG 940 >seq3894 Length=1582 Score = 134 bits (148), Expect = 2e-26 Identities = 370/558 (66%), Gaps = 13/558 (2%) Strand=Plus/Plus Query 82113 CTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGGTTGCGGCGCTG 82172 ||| ||||| | |||||| |||||| | ||| |||||||| |||| |||| | Sbjct 830 CTCATCGCGCACCGACCAGGACACGATCTGGCCCATCCCCTTCATCTTGTTGAAGCGCGG 889 Query 82173 GAAGGACATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCGAGAA 82232 |||| |||||||| || ||||| | || ||||||| || ||| ||| | ||| Sbjct 890 GAAGTTCATCAGCATCGCAAAGGAAGCAAACAGCTGCAAACCTTCGGTAAAGCCGCCGAA 949 Query 82233 CACGGCGATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTCCCGATTGAACATGTA 82292 ||| || ||| | | | ||| || | ||| | | ||| | || Sbjct 950 CACCGCCATGGAGGTGAGGATGTCTTTTTCCGTCTCCACGCCGAAC---TTGCCGAGATA 1006 Query 82293 CTCGTGCTTTTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTCGGGCAG 82352 |||||||| | |||| ||||||| || | ||||||| ||||||| ||||||| Sbjct 1007 GTCGTGCTTGGCCGCCATCTCCTCGTACTCCATGAAGGCGGAGAACTCGGTGTCGGGCAT 1066 Query 82353 GCCCAGGGTGTCGATCAGCGTCGAGTAGGCGTCGATGTGGTTGGCCTCGGCGGCGATGAA 82412 ||| | || || | || || ||||||| ||||||| | ||| | | ||| Sbjct 1067 GCCGATCGTCTCAAGCAATAGCGCGTAGGCGGCGATGTGAACCGTCTCCATGTTGGAGAA 1126 Query 82413 CGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAGCGCGGGCCGTACTTCTCGAAGTA 82472 || ||||||||| |||||||| || |||| |||| ||| || || | ||| Sbjct 1127 GGCCGACAGCATCATGCGCACTTCAACCGGCTTGAAGAGCGGCATGTAGTTTTCCATGTA 1186 Query 82473 GCCGCGCGCC-ACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCAGCAG-- 82529 | ||||| || || ||||| | |||||||||||| ||||| | || |||||||| Sbjct 1187 GTTA-GCGCCGACTTCCACGTCCGACTGGGTGAAGAAGCGGAAAATCTGGGTCAGCAGAT 1245 Query 82530 -GGACTTCTCGTTCGGCGTCAGCTTC-TCGTTCCAGTCCTGGATGTCCTGGTCCATGGGG 82587 | || || || ||| ||||||| ||| |||||||| | ||||| | | || Sbjct 1246 TGCGCTCCTTGT-CGG--TCAGCTTGGTCGC-CCAGTCCTTGCAGTCCTCACCGAGCGGC 1301 Query 82588 GCTTCGTGCGGAAGCCAGTGCATGGCCTGCATGGTCTTGTAGGCCTCATAGGCCCAGGGG 82647 | || | ||| |||||||||| |||| |||||| || ||||||||||| | Sbjct 1302 ACCTCTTCCGGCAGCCAGTGCACCTGCTGCTGGGTCTTCCAGAAGTCATAGGCCCACTGA 1361 Query 82648 TAGACGAACGGCTTGTAG 82665 ||| ||||||||||||| Sbjct 1362 TAGCGGAACGGCTTGTAG 1379 >seq13808 Length=625 Score = 129 bits (142), Expect = 8e-25 Identities = 270/393 (69%), Gaps = 16/393 (4%) Strand=Plus/Plus Query 85029 ATTTCCGGGTGGCTGATGTCCAGATAGACGGCGTTGGAGCCCCGGCGCGTGCCGCCTTGG 85088 ||||||||||| ||||||||||||| | || |||||||||||| ||||||| Sbjct 22 ATTTCCGGGTGATCGATGTCCAGATAGGCCGCAGCCGAGCCCCGGCGCAGCGAGCCTTGG 81 Query 85089 CTGACGGCGAGAATCAGGCGATCGTCCACCGCC---ATGAACGGGATCACGCCGGTCGAC 85145 | || || | || ||| ||||| | | ||||| || || | ||| | || | Sbjct 82 GAAATCGCCAGGGTGAG-CGA--GTCCATCACGCGGATGAAAGGAATGATGCCCGACGTC 138 Query 85146 TGCGAACCCTTC-GA--GGTCTTCTCGCCCAGGCCGCGCAGGGCGCCGTAGTAGGAGCCG 85202 || || ||| || | ||||||||| | ||||| |||| |||||| |||| Sbjct 139 TGG---CCATTCTGACCGACCTTCTCGCCGATAGAGCGCACACCGCCCCAGTAGGTGCCG 195 Query 85203 ATGCCGCCGCCCATCGACGAGAGCCAGATGACCTC-GTCATAGTGCTCG-GAGATCGACT 85260 |||||||| || | || | ||||||| ||| ||| |||| | || ||| | Sbjct 196 ATGCCGCCACCGTTGGAGGCCAGCCAGACATTCTCTGTCCAGGTGCCCACGATGTCGTCC 255 Query 85261 CGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGGCAGGCCGCGCGCGGACCCGC 85320 ||| | | | | || | | | ||||||||||||||||||||||||| | | |||| Sbjct 256 AGCGAAT--CGTGAACCGAGTTCAAGAAGCAGGAGATCGGCAGGCCGCGCTCTGCGCCGC 313 Query 85321 CGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAGAGCC 85380 | || ||||| | ||||| || ||||||||| |||||||| | ||||| || || | Sbjct 314 CATTGGACAGGACCGGCGTTGCCGGCATGAACCACAGGTTCGACATGTAGTCATAAAGGC 373 Query 85381 GCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCG 85413 ||||| |||||||| || || || |||||| Sbjct 374 GCTGGGCGTGCTCGATATCGTCGGCATAGGCCG 406 >seq7 Length=75526 Score = 104 bits (114), Expect = 3e-17 Identities = 362/560 (65%), Gaps = 30/560 (5%) Strand=Plus/Plus Query 83221 GGCCCAGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACA 83280 ||||| ||| ||||| |||| |||| |||||| || | |||||| || | Sbjct 20119 GGCCCTTTTCTTCCAGGAGCTTGGTCAGGTGACGGTTCCGCACATTGTGCGAGCCAGAGA 20178 Query 83281 GAGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCCCCGC 83340 | |||||||| ||| ||||||| | ||| ||||| || | ||| ||||| |||| Sbjct 20179 GCGTCTTGTGGGTAAAGCTGTTGGCTGCGATGGGCTCAATGCCTGCCGACGTGCCACCGC 20238 Query 83341 AAAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCG 83400 ||| ||||||| || ||| | || ||||| || ||||| || ||| ||||| | Sbjct 20239 AAATGATCGAGATGGACGCGGTTGGTGCCACAGCTGACTTGTTGGAGAAGCGCTC---CA 20295 Query 83401 TGCCTTCCAT-GTCCGGCGCCTCG---------CCGCGCTCCTTGCCCAGCAGCAGGGAA 83450 || | |||| ||| | ||| ||| || ||||| | ||||| | || Sbjct 20296 TGA-TGCCATAGTCTGCCGCATCGGGACATGCGCCCCGCTCTTCCGCCAGCTTCTTTGAG 20354 Query 83451 GCCGCGTCGGCCTGCTTGCGCATGTGGACGAACAGTTCCAGGTTCAGCCGGCGGGCGGCG 83510 ||||| || ||||| | || || ||| | | | |||| | | | || | Sbjct 20355 GCCGCATCTGCCTGGTCATCAATATGCTTGAAGATCTTCTTGTTC--CAGACCTTCGCCA 20412 Query 83511 TGACTC--TCGAACGGGAT------GTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCA 83562 | || | || |||||||| | || |||| | || ||||||||||| | | Sbjct 20413 TCACACCTTCAAACGGGATCATGTTGGCCTGCAT-----GAAG-GAGTGGAAGCCCATAA 20466 Query 83563 GGCCCAGGCCCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCG 83622 ||| |||||||| || |||||||||| ||| || ||| || ||| ||||| | Sbjct 20467 CGCCAAGGCCCACAGAACGTTCGCGCATGGCAGAATATTTGGCCTGGGCCATTTCGTCTG 20526 Query 83623 GCGCGTTGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGA 83682 | ||| |||||| || |||| ||| ||||| || | ||||| || |||||||| | Sbjct 20527 GTGCGCGGTCGATAAAGTCCTGAAGGACATTGTCGAGGAAGCGCATCACATCTTCGATAA 20586 Query 83683 AGGTCGGGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAAAGGCAGCAGA 83742 | ||| || ||| ||| | ||||||| || | | ||| || ||||||| Sbjct 20587 ACTGCGGATGGCTTTCCCATTCCTGGAACTTCTCAATATTCAAGGAGGAGAGACAGCAGA 20646 Query 83743 CGGCGGTCCGCATCTTGCCG 83762 | ||||| || ||||||| Sbjct 20647 CCGCGGTGCGTGCCTTGCCG 20666 >seq3432 Length=1729 Score = 86.0 bits (94), Expect = 9e-12 Identities = 68/81 (84%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 102507 ACGCGGGGTAGAGGAGTCCGGTTGTCCTCGTCTGGCTCATAACCAGGAGATCGTGGGTTC 102566 ||||||| | ||| |||||||| | |||||| ||||||||||| | || |||| ||||| Sbjct 1057 ACGCGGGATGGAGCAGTCCGGTAG--CTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTC 1000 Query 102567 AAATCCCACTCCCGCTCCCAA 102587 |||||| |||||||| ||||| Sbjct 999 AAATCCTACTCCCGCACCCAA 979 >seq781 Length=5346 Score = 84.2 bits (92), Expect = 3e-11 Identities = 163/235 (69%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 88763 CTTGCCTTCGCGCGCCAGGGTCGACAGGTGGATGATCGGATTGTCCTGGGCCTGCCGGTG 88822 || ||| |||||||||| || | || | ||||||| | | || ||||| || || Sbjct 609 CTGGCCCTCGCGCGCCATTGTGGCCAAGCGGATGATGGCGCTCTCGGATGCCTGTCGATG 668 Query 88823 GATTTCCGACAGGAAGAAGTCCGGATC---ATTGGCCAGCAGGCCCGCGTCGTCCTCGAC 88879 ||| || | ||| | | |||||||| ||||| | |||||| |||| ||| || Sbjct 669 GATCTCGGTCAGCATCACATCCGGATCGACATTGGTGA--AGGCCC-CGTCTCCCTTGAT 725 Query 88880 CGGCGGAAGCTGACCAGGATCGCCCATGGCGAAGATCGGCACCCCGTATTCCATGAGGTC 88939 ||| ||||||||||| ||||| |||| | | ||| || | | ||| ||||| Sbjct 726 CGGGGGAAGCTGACCGGGATCACCCAGCACAAGGATGGGTTTTTTGAAACTCATCAGGTC 785 Query 88940 GTCGGTCATC-CGGCGCCCGACCATGGACGCCTCGTCGACGACGATCAGGCTCGC 88993 | | |||| | ||||| ||||||||| ||||||||| |||||||| || || Sbjct 786 GCGCGCCATCTCCTCGCCC-ACCATGGACACCTCGTCGAGCACGATCAGCCTGGC 839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700299659081880