Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019410.1 Length=221828 Score E Sequences producing significant alignments: (Bits) Value seq1156 298 8e-76 seq8156 201 2e-46 seq3894 134 2e-26 seq13808 132 7e-26 seq7 104 3e-17 seq781 93.3 6e-14 seq3432 86.0 9e-12 >seq1156 Length=3943 Score = 298 bits (330), Expect = 8e-76 Identities = 693/1038 (67%), Gaps = 43/1038 (4%) Strand=Plus/Plus Query 137207 CCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGCC 137266 |||||||| |||| || || ||||| |||||||| | ||||| || || |||| ||| Sbjct 1059 CCCTTCACACAGACAACCTGTTTGAGCGTGTGGACCACCTCCACCAGATCGGTCTGCGCC 1118 Query 137267 TCCATGACCGCGTCGNNNNNNNNNNNNNNNNNNNNNATTTCGTCGATCACGCCGGCGTCC 137326 ||||||| | |||| | || ||||| ||||| ||| Sbjct 1119 GCCATGACGGTGTCGATATCCTTGTAGGCCGCAGGCGTCTCATCGATGACGCCTTGGTCT 1178 Query 137327 TTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGAGTGAAGGTCGCCTTG 137386 || ||||| || || || || ||||| ||| || || | || ||||||||| |||| Sbjct 1179 TTACGGCATTCGACCCCTTCTGTGGCTTTGCGGTGATCGCCAAGCGTGAAGGTCCGCTTG 1238 Query 137387 GCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCCGCA 137446 || | ||||| |||||| || | ||||| || || ||||| |||||||| ||| | Sbjct 1239 GCTTCAGTCCGGGACATCTTC-GCCCCGCCCCATGGGAGCAGGAGCAGAAGCTGTCAGAC 1297 Query 137447 TTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCCCGAAC 137506 | ||||||||||||||||||| ||||||||||||||||||| ||||| || ||||| | | Sbjct 1298 TGGCCCTTGCCGCGCACGATGAAGGACTTGGCCCCCATCGACCCGGGAATAATCCCCAGC 1357 Query 137507 TGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGAAGTGG 137566 | ||| |||| || || || ||||||||||||| |||| | | ||||| Sbjct 1358 TCACCCTCGCGCGCAGAGACGGCCCCCTTGCGGGTCAGCCAGACTTCGGCCCCAAAGTGA 1417 Query 137567 AATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGAACGGC 137626 || ||| || |||||||||||||| ||||| || |||||| ||||||||| Sbjct 1418 TGCTCACGCTGCACATAGTTGTGGTGGCAATTCACGGCCGACTTGTCGGTCTTGAACTTG 1477 Query 137627 GGCAGGCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCGGTTGATC 137686 ||| || | ||||| ||| || |||||| ||||||| || || || | Sbjct 1478 CCCAG---CGTCTTACGCATCGCCATCAAAACCCGGGCCATCATGGCTTCCCGATTCAGG 1534 Query 137687 CGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAACTCCGGCTCGCCT 137746 || ||| |||||||| ||||| | || |||||||| ||||| | |||| ||||| ||| Sbjct 1535 CGAGCGTAGTCCTGGGCCCAGCCTACAGCTTCCACATAGTCATCGAACAGGGGCTCACCT 1594 Query 137747 TCGCAGAGCCAAGCAAGGTCCTTGTC--CAGCG-GCTTGCGCCCGTCACGGCGCAGCATC 137803 || || | || || |||||||| | || | | | | | ||||| ||| | Sbjct 1595 TCCAGGAAGAAGGCGAGATCCTTGTCGGGAACGTGAAAGTCCAGGACCCGGCG-AGC--C 1651 Query 137804 ATCTCCTTG---GCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGAG 137860 | ||| | | ||| | ||||||| | || | |||| ||| || |||||| Sbjct 1652 AGCTCTTCGCGCGCCCGGTTGATGAAGTAGGTCCCCACCATGTTTCCGGTTCCACGCGAG 1711 Query 137861 CCCGAGTGGAGCATCACCCAGACGCGCTGATCCTCGTCGAGGCAGACCTCGATGAAGTGG 137920 || ||||| | |||||||||||| | | || |||||||| | |||||||||||| Sbjct 1712 CCAGAGTGCAACATCACCCAGACATCACCAGCTTCATCGAGGCACAGCTCGATGAAGTGA 1771 Query 137921 TTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTG-GCGTTCTTCAGCGCCGGGTA 137979 || ||||| || || || ||||| || || | | ||| | | | | | ||||| Sbjct 1772 TTTCCGCCCCCAAGCGTTCCCAGCTGCCCCGCAATCTTGTGAGCGC-CGATCTTCGGGTG 1830 Query 137980 CTTCTCGCAGAGCTTGTC---GAACCGCGCCTCCAGGCCCGAATCGACCCACTTGCGCAG 138036 ||| || || || | ||||||| | | | | || || || | ||| Sbjct 1831 CTTGTCCTTGA---TGACCGAGAACCGCTCGGCGATCTCGGAGTCAAC------GAGCAT 1881 Query 138037 GAT--CGAGTTGGGGATGCCGCTGCGCCCGTTCCAGCCGCCCGACGGACCCGGCCCG--- 138091 | | ||| ||||| | || || || | || || | ||||||| Sbjct 1882 GGTGCCGA----CCGATGCTGGGGC-----ATCGAGATGATCGCCG--CGCGGCCCGTTT 1930 Query 138092 CCGTGCGGGACGGCGTGCTCGATCAGCGAGCGAAGCTTGGACAGGCTGTCGGGGAGGTCC 138151 ||| ||||| || |||||||| || | ||| | ||||| ||| || |||| Sbjct 1931 CCGACAGGGACAGCCCGCTCGATCTCATCACGCACCTTCGCCAGGCCGTCAGGCAGGTTG 1990 Query 138152 GACGCGGTCAGGCTGGTGCGGACCGCCATCATGCCGCAGCCGATGTCGACGCCGACGGCG 138211 || ||||||||||| |||| ||||||||| || |||||||| || || ||||| || Sbjct 1991 TTTGCCGTCAGGCTGGTCCGGATCGCCATCATCCCACAGCCGATATCCACCCCGACCGCA 2050 Query 138212 GCCGGGATGATCGCGCCC 138229 ||||| |||||||||||| Sbjct 2051 GCCGGAATGATCGCGCCC 2068 >seq8156 Length=952 Score = 201 bits (222), Expect = 2e-46 Identities = 332/484 (69%), Gaps = 13/484 (3%) Strand=Plus/Plus Query 137205 AGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGG 137264 |||| ||||||||||| || || || |||||||| | | || || || || ||||| Sbjct 465 AGCCTTTCACGCAGAGCACCTGTTTCAGGGTGTGCTCCACATCGACAAGTTCGGCCTGGG 524 Query 137265 CCTCCATGACCGCGTCGNNNNNNNNNNNNNNNNNNNNNATTTCGTCGATCACGCCGGCGT 137324 | |||||||||||||| |||| ||||| ||| | || Sbjct 525 CGGCCATGACCGCGTCGATGTCCTTATAGGCCATCGGCGTTTCATCGATGACGTCCTTGT 584 Query 137325 CCTTGCGGCACTCCACGCCCTCGGT---GGCCTTGATCTGGTCCTCCAGAGTGAAGGTCG 137381 ||||||||||||| ||||| ||||| |||| | ||||| ||| || |||||| Sbjct 585 CCTTGCGGCACTCGACGCCTTCGGTCGCGGCCCGG---TGGTCGGCCAAGGTAAAGGTCC 641 Query 137382 CCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAGT 137441 |||||||| | ||| ||||| ||| || || ||||| ||||| ||| ||| || | Sbjct 642 GCTTGGCCTCGCCCCGGGACATGACCCGCCCGGCCCCGTGGGAGCAGGAGTGGAAGGACT 701 Query 137442 CCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATCC 137501 | ||||||||||| ||||||||| | ||| || ||||||||||| || ||||| | Sbjct 702 GGTCGTTGCCCTTGCCCCGCACGATGAATGACCGCGCGCCCATCGAGCCCGGAATGATGC 761 Query 137502 CGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTCGA 137561 | | | |||| | ||| ||| || ||||| ||||||| | || || ||| Sbjct 762 CCAGGTCACCCTTGCGGGCCCGCACGGCCCCCTTCCGGGTCAGCCACACATTGGCGCCGA 821 Query 137562 AGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTTGA 137621 ||||| ||| | || |||||||||||||||||||||||||| || ||||| Sbjct 822 AGTGGTTCTCCCGCGCCACATAGTTGTGGTGGCAGTTCACCGCTTCTTTCGAGAGCTTGA 881 Query 137622 ACGGCGGCAGGCCCGACGC--CCGCATGGCCTCCAGGACCCGGACCATCATCATCTCGCG 137679 || | |||| || || ||||| || ||||| || ||| |||||||| ||| || Sbjct 882 ACCGGGGCA-----GATGCTTGCGCATCGCGTCCAGCACGCGGCTCATCATCACCTCCCG 936 Query 137680 GTTG 137683 |||| Sbjct 937 GTTG 940 >seq3894 Length=1582 Score = 134 bits (148), Expect = 2e-26 Identities = 369/558 (66%), Gaps = 13/558 (2%) Strand=Plus/Plus Query 83522 CTCGTCGCGGATCGACCACTCGACGATCGTGGTCATGCCCTTCATGCGGTTGCGGCGCTG 83581 ||| ||||| | |||||| |||||| | ||| |||||||| |||| |||| | Sbjct 830 CTCATCGCGCACCGACCAGGACACGATCTGGCCCATCCCCTTCATCTTGTTGAAGCGCGG 889 Query 83582 GAAGGACATCAGCAGGGCGAAGGACGAGAAAAGCTGCATCCCCTCGCCGAAGGCCGAGAA 83641 |||| |||||||| || ||||| | || ||||||| || ||| ||| | ||| Sbjct 890 GAAGTTCATCAGCATCGCAAAGGAAGCAAACAGCTGCAAACCTTCGGTAAAGCCGCCGAA 949 Query 83642 CACGGCGATGTCGACCATCAGGTCGGCGATCGAGTTGCCGCTGTCCCGATTGAACATGTA 83701 ||| || ||| | | | ||| || | ||| | | ||| | || Sbjct 950 CACCGCCATGGAGGTGAGGATGTCTTTTTCCGTCTCCACGCCGAAC---TTGCCGAGATA 1006 Query 83702 CTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTCGGGCAG 83761 |||||||| | |||| ||||||| || | ||||||| ||||||| ||||||| Sbjct 1007 GTCGTGCTTGGCCGCCATCTCCTCGTACTCCATGAAGGCGGAGAACTCGGTGTCGGGCAT 1066 Query 83762 GCCCAGGGTGTCGATCAGCGTCGAGTAGGCGTCGATGTGGTTGGCCTCGGCGGCGATGAA 83821 ||| | || || | || || ||||||| ||||||| | ||| | | ||| Sbjct 1067 GCCGATCGTCTCAAGCAATAGCGCGTAGGCGGCGATGTGAACCGTCTCCATGTTGGAGAA 1126 Query 83822 CGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAGCGCGGGCCGTACTTCTCGAAGTA 83881 || ||||||||| |||||||| || |||| |||| ||| || || | ||| Sbjct 1127 GGCCGACAGCATCATGCGCACTTCAACCGGCTTGAAGAGCGGCATGTAGTTTTCCATGTA 1186 Query 83882 GCCGCGCGCC-ACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCAGCAG-- 83938 | ||||| || || ||||| | |||||||||||| ||||| | || |||||||| Sbjct 1187 GTTA-GCGCCGACTTCCACGTCCGACTGGGTGAAGAAGCGGAAAATCTGGGTCAGCAGAT 1245 Query 83939 -GGACTTCTCGTCCGGCGTCAGCTTC-TCGTTCCAGTCCTGGATGTCCTGGTCCATGGGG 83996 | || || ||| | ||||||| ||| |||||||| | ||||| | | || Sbjct 1246 TGCGCTCCTTGTCGG---TCAGCTTGGTCGC-CCAGTCCTTGCAGTCCTCACCGAGCGGC 1301 Query 83997 GCTTCGTGCGGAAGCCAGTGCATGGCCTGCATGGTCTTGTAGGCCTCATAGGCCCAGGGG 84056 | || | ||| |||||||||| |||| |||||| || ||||||||||| | Sbjct 1302 ACCTCTTCCGGCAGCCAGTGCACCTGCTGCTGGGTCTTCCAGAAGTCATAGGCCCACTGA 1361 Query 84057 TAGACGAACGGCTTGTAG 84074 ||| ||||||||||||| Sbjct 1362 TAGCGGAACGGCTTGTAG 1379 >seq13808 Length=625 Score = 132 bits (146), Expect = 7e-26 Identities = 271/393 (69%), Gaps = 16/393 (4%) Strand=Plus/Plus Query 86438 ATTTCCGGGTGGCTGATGTCCAGATAGACGGCGTTGGAGCCCCGGCGCGTGCCGCCTTGG 86497 ||||||||||| ||||||||||||| | || |||||||||||| ||||||| Sbjct 22 ATTTCCGGGTGATCGATGTCCAGATAGGCCGCAGCCGAGCCCCGGCGCAGCGAGCCTTGG 81 Query 86498 CTGACGGCGAGAATCAGGCGATCGTCCACCGCC---ATGAACGGGATCACGCCGGTCGAC 86554 | || || | || ||| ||||| | | ||||| || || | ||| | || | Sbjct 82 GAAATCGCCAGGGTGAG-CGA--GTCCATCACGCGGATGAAAGGAATGATGCCCGACGTC 138 Query 86555 TGCGAACCCTTC-GA--GGTCTTCTCGCCCAGGCCGCGCAGGGCGCCGTAGTAGGAGCCG 86611 || || ||| || | ||||||||| | ||||| |||| |||||| |||| Sbjct 139 TGG---CCATTCTGACCGACCTTCTCGCCGATAGAGCGCACACCGCCCCAGTAGGTGCCG 195 Query 86612 ATGCCGCCGCCCATCGACGAGAGCCAGATAACCTC-GTCATAGTGCTCG-GAGATCGACT 86669 |||||||| || | || | ||||||| | ||| ||| |||| | || ||| | Sbjct 196 ATGCCGCCACCGTTGGAGGCCAGCCAGACATTCTCTGTCCAGGTGCCCACGATGTCGTCC 255 Query 86670 CGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGGCAGGCCGCGCGCGGACCCGC 86729 ||| | | | | || | | | ||||||||||||||||||||||||| | | |||| Sbjct 256 AGCGAAT--CGTGAACCGAGTTCAAGAAGCAGGAGATCGGCAGGCCGCGCTCTGCGCCGC 313 Query 86730 CGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAGAGCC 86789 | || ||||| | ||||| || ||||||||| |||||||| | ||||| || || | Sbjct 314 CATTGGACAGGACCGGCGTTGCCGGCATGAACCACAGGTTCGACATGTAGTCATAAAGGC 373 Query 86790 GCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCG 86822 ||||| |||||||| || || || |||||| Sbjct 374 GCTGGGCGTGCTCGATATCGTCGGCATAGGCCG 406 >seq7 Length=75526 Score = 104 bits (114), Expect = 3e-17 Identities = 362/560 (65%), Gaps = 30/560 (5%) Strand=Plus/Plus Query 84630 GGCCCAGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACA 84689 ||||| ||| ||||| |||| |||| |||||| || | |||||| || | Sbjct 20119 GGCCCTTTTCTTCCAGGAGCTTGGTCAGGTGACGGTTCCGCACATTGTGCGAGCCAGAGA 20178 Query 84690 GGGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCCCCGC 84749 | |||||||| ||| ||||||| | ||| ||||| || | ||| ||||| |||| Sbjct 20179 GCGTCTTGTGGGTAAAGCTGTTGGCTGCGATGGGCTCAATGCCTGCCGACGTGCCACCGC 20238 Query 84750 AGAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCG 84809 | | ||||||| || ||| | || ||||| || ||||| || ||| ||||| | Sbjct 20239 AAATGATCGAGATGGACGCGGTTGGTGCCACAGCTGACTTGTTGGAGAAGCGCTC---CA 20295 Query 84810 TGCCTTCCAT-GTCCGGCGCCTCG---------CCGCGCTCCTTGCCCAGCAGCAGGGAA 84859 || | |||| ||| | ||| ||| || ||||| | ||||| | || Sbjct 20296 TGA-TGCCATAGTCTGCCGCATCGGGACATGCGCCCCGCTCTTCCGCCAGCTTCTTTGAG 20354 Query 84860 GCCGCGTCGGCCTGCTTGCGCATGTGGACGAACAGTTCCAGGTTCAGCCGGCGGGCGGCG 84919 ||||| || ||||| | || || ||| | | | |||| | | | || | Sbjct 20355 GCCGCATCTGCCTGGTCATCAATATGCTTGAAGATCTTCTTGTTC--CAGACCTTCGCCA 20412 Query 84920 TGACTC--TCGAACGGGAT------GTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCA 84971 | || | || |||||||| | || |||| | || ||||||||||| | | Sbjct 20413 TCACACCTTCAAACGGGATCATGTTGGCCTGCAT-----GAAG-GAGTGGAAGCCCATAA 20466 Query 84972 GGCCCAGGCCCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCG 85031 ||| |||||||| || |||||||||| ||| || ||| || ||| ||||| | Sbjct 20467 CGCCAAGGCCCACAGAACGTTCGCGCATGGCAGAATATTTGGCCTGGGCCATTTCGTCTG 20526 Query 85032 GCGCGTTGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGA 85091 | ||| |||||| || |||| ||| ||||| || | ||||| || |||||||| | Sbjct 20527 GTGCGCGGTCGATAAAGTCCTGAAGGACATTGTCGAGGAAGCGCATCACATCTTCGATAA 20586 Query 85092 AGGTCGGGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGA 85151 | ||| || ||| ||| | ||||||| || | | |||||| ||||||| Sbjct 20587 ACTGCGGATGGCTTTCCCATTCCTGGAACTTCTCAATATTCAAGGAGGAGAGACAGCAGA 20646 Query 85152 CGGCGGTCCGCATCTTGCCG 85171 | ||||| || ||||||| Sbjct 20647 CCGCGGTGCGTGCCTTGCCG 20666 >seq781 Length=5346 Score = 93.3 bits (102), Expect = 6e-14 Identities = 165/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 90172 CTTGCCTTCGCGCGCCAGGGTCGACAGGTGGATGATCGGATTGTCCTGGGCCTGCCGGTG 90231 || ||| |||||||||| || | || | ||||||| | | || ||||| || || Sbjct 609 CTGGCCCTCGCGCGCCATTGTGGCCAAGCGGATGATGGCGCTCTCGGATGCCTGTCGATG 668 Query 90232 GATTTCCGACAGGAAGAAGTCCGGATC---ATTGGCCAGCAGGCCCGCGTCGTCCTCGAC 90288 ||| || | ||| | | |||||||| ||||| | |||||| |||| ||| || Sbjct 669 GATCTCGGTCAGCATCACATCCGGATCGACATTGGTGA--AGGCCC-CGTCTCCCTTGAT 725 Query 90289 CGGGGGAAGCTGACCAGGATCGCCCATGGCGAAGATCGGCACCCCGTATTCCATCAGGTC 90348 ||||||||||||||| ||||| |||| | | ||| || | | ||||||||| Sbjct 726 CGGGGGAAGCTGACCGGGATCACCCAGCACAAGGATGGGTTTTTTGAAACTCATCAGGTC 785 Query 90349 GTCGGTCATC-CGGCGCCCGACCATGGACGCCTCGTCGACGACGATCAGGCTCGC 90402 | | |||| | ||||| ||||||||| ||||||||| |||||||| || || Sbjct 786 GCGCGCCATCTCCTCGCCC-ACCATGGACACCTCGTCGAGCACGATCAGCCTGGC 839 >seq3432 Length=1729 Score = 86.0 bits (94), Expect = 9e-12 Identities = 68/81 (84%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 104350 ACGCGGGGTAGAGGAGTCCGGTTGTCCTCGTCTGGCTCATAACCAGGAGATCGTGGGTTC 104409 ||||||| | ||| |||||||| | |||||| ||||||||||| | || |||| ||||| Sbjct 1057 ACGCGGGATGGAGCAGTCCGGTAG--CTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTC 1000 Query 104410 AAATCCCACTCCCGCTCCCAA 104430 |||||| |||||||| ||||| Sbjct 999 AAATCCTACTCCCGCACCCAA 979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 709574536812960