Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019411.1 Length=219216 Score E Sequences producing significant alignments: (Bits) Value seq1156 277 3e-69 seq8156 190 3e-43 seq13808 129 8e-25 seq7 113 6e-20 seq3894 93.3 6e-14 seq781 89.7 7e-13 seq3432 86.0 9e-12 seq1053 86.0 9e-12 >seq1156 Length=3943 Score = 277 bits (306), Expect = 3e-69 Identities = 630/931 (68%), Gaps = 45/931 (5%) Strand=Plus/Plus Query 136079 ACGCCGGCGTCCTTGCGGCACTCCACGCCCTCGGTGGCCTTGATCTGGTCCTCCAGGGTG 136138 ||||| ||| || ||||| || || || || ||||| ||| || || | || ||| Sbjct 1167 ACGCCTTGGTCTTTACGGCATTCGACCCCTTCTGTGGCTTTGCGGTGATCGCCAAGCGTG 1226 Query 136139 AAGGTCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAG 136198 |||||| |||||| | ||||| |||||| || | ||||| || || ||||| |||||| Sbjct 1227 AAGGTCCGCTTGGCTTCAGTCCGGGACATCTTC-GCCCCGCCCCATGGGAGCAGGAGCAG 1285 Query 136199 AACGAGTCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGG 136258 || ||| | | ||||||||||||||||||| ||||||||||||||||||| ||||| Sbjct 1286 AAGCTGTCAGACTGGCCCTTGCCGCGCACGATGAAGGACTTGGCCCCCATCGACCCGGGA 1345 Query 136259 ATGATCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCAC 136318 || ||||| | || ||| |||| || || || ||||||||||||| |||| Sbjct 1346 ATAATCCCCAGCTCACCCTCGCGCGCAGAGACGGCCCCCTTGCGGGTCAGCCAGACTTCG 1405 Query 136319 TCGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCC 136378 | | ||||| || ||| || |||||||||||||| ||||| || |||||| Sbjct 1406 GCCCCAAAGTGATGCTCACGCTGCACATAGTTGTGGTGGCAATTCACGGCCGACTTGTCG 1465 Query 136379 GTCTTGAACGGCGGCAGGCCCGACGCTCGCATGGCCTCCAGGACCCGGACCATCATCATC 136438 ||||||||| ||| || | ||||| ||| || |||||| ||||||| Sbjct 1466 GTCTTGAACTTGCCCAG---CGTCTTACGCATCGCCATCAAAACCCGGGCCATCATGGCT 1522 Query 136439 TCGCGGTTGATCCGCGCGAAGTCCTGGCCCCAGGCGACGGCTTCCACGTAGTCGTGGAAC 136498 || || || | || ||| |||||||| ||||| | || |||||||| ||||| | |||| Sbjct 1523 TCCCGATTCAGGCGAGCGTAGTCCTGGGCCCAGCCTACAGCTTCCACATAGTCATCGAAC 1582 Query 136499 TCCGGCTCGCCTTCGCAGAGCCAAGCAAGGTCCTTGTC--CAGCGGCTTACGCC-CGTCA 136555 ||||| ||||| || | || || |||||||| | || | || | | Sbjct 1583 AGGGGCTCACCTTCCAGGAAGAAGGCGAGATCCTTGTCGGGAACGTGAAAGTCCAGGACC 1642 Query 136556 CGGCGCAGCATCATCTCCTTG---GCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCG 136612 ||||| ||| || ||| | | ||| | ||||||| | || | |||| ||| Sbjct 1643 CGGCG-AGC--CAGCTCTTCGCGCGCCCGGTTGATGAAGTAGGTCCCCACCATGTTTCCG 1699 Query 136613 ACGCCGCGCGAGCCCGAGTGGAGCATCACCCAGAC-GCGCTGGTCCTCGTCGAGGCAGAC 136671 || |||||||| ||||| | |||||||||||| | | | | || |||||||| | Sbjct 1700 GTTCCACGCGAGCCAGAGTGCAACATCACCCAGACATCACCAG-CTTCATCGAGGCACAG 1758 Query 136672 CTCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTGGACCACGCTGTTG-GCGTTCT 136730 |||||||||||| || ||||| || || || ||||| || || | | ||| | | | Sbjct 1759 CTCGATGAAGTGATTTCCGCCCCCAAGCGTTCCCAGCTGCCCCGCAATCTTGTGAGCGC- 1817 Query 136731 TCAGCGCCGGGTACTTCTCGCAGAGCTTGTC---GAACCGCGCCTCCAGGCCCGAGTCGA 136787 | | ||||| ||| || || || | ||||||| | | | | ||||| | Sbjct 1818 CGATCTTCGGGTGCTTGTCCTTGA---TGACCGAGAACCGCTCGGCGATCTCGGAGTCAA 1874 Query 136788 CCCACTTGCGCAGGAT--CGAGTTGGGGATGCCGCTGCGCCCGTTCCAGCCGCCCGACGG 136845 | | ||| | | ||| ||||| | || || || | || || Sbjct 1875 C------GAGCATGGTGCCGA----CCGATGCTGGGGC-----ATCGAGATGATCGCCG- 1918 Query 136846 ACCCGGCCCG---CCGTGCGGGACGGCGTGCTCGATCAGCGAGCGAAGCTTGGCGAGGCT 136902 | ||||||| ||| ||||| || |||||||| || | ||| || |||| Sbjct 1919 -CGCGGCCCGTTTCCGACAGGGACAGCCCGCTCGATCTCATCACGCACCTTCGCCAGGCC 1977 Query 136903 GTCGGGAAGGTCCGACGCGGTCAGGCTGGTGCGGACCGCCATCATGCCGCAGCCGATGTC 136962 ||| || |||| || ||||||||||| |||| ||||||||| || |||||||| || Sbjct 1978 GTCAGGCAGGTTGTTTGCCGTCAGGCTGGTCCGGATCGCCATCATCCCACAGCCGATATC 2037 Query 136963 GACGCCGACGGCGGCCGGGATGATCGCGCCC 136993 || ||||| || ||||| |||||||||||| Sbjct 2038 CACCCCGACCGCAGCCGGAATGATCGCGCCC 2068 >seq8156 Length=952 Score = 190 bits (210), Expect = 3e-43 Identities = 263/366 (72%), Gaps = 13/366 (4%) Strand=Plus/Plus Query 136087 GTCCTTGCGGCACTCCACGCCCTCGGT---GGCCTTGATCTGGTCCTCCAGGGTGAAGGT 136143 ||||||||||||||| ||||| ||||| |||| | ||||| ||| ||| ||||| Sbjct 583 GTCCTTGCGGCACTCGACGCCTTCGGTCGCGGCCCGG---TGGTCGGCCAAGGTAAAGGT 639 Query 136144 CGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGA 136203 | |||||||| | ||| ||||| ||| || || ||||| ||||| ||| ||| || Sbjct 640 CCGCTTGGCCTCGCCCCGGGACATGACCCGCCCGGCCCCGTGGGAGCAGGAGTGGAAGGA 699 Query 136204 GTCCGCGTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGAT 136263 | ||||||||||||| ||||||||| | ||| || ||||||||||| || ||||| Sbjct 700 CTGGTCGTTGCCCTTGCCCCGCACGATGAATGACCGCGCGCCCATCGAGCCCGGAATGAT 759 Query 136264 CCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACTCGTC 136323 || | | |||| | ||| ||| || ||||| ||||||| | || || | Sbjct 760 GCCCAGGTCACCCTTGCGGGCCCGCACGGCCCCCTTCCGGGTCAGCCACACATTGGCGCC 819 Query 136324 GAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCGTCTT 136383 ||||||| ||| | || |||||||||||||||||||||||||| || ||| Sbjct 820 GAAGTGGTTCTCCCGCGCCACATAGTTGTGGTGGCAGTTCACCGCTTCTTTCGAGAGCTT 879 Query 136384 GAACGGCGGCAGGCCCGACGCT--CGCATGGCCTCCAGGACCCGGACCATCATCATCTCG 136441 |||| | |||| || ||| ||||| || ||||| || ||| |||||||| ||| Sbjct 880 GAACCGGGGCA-----GATGCTTGCGCATCGCGTCCAGCACGCGGCTCATCATCACCTCC 934 Query 136442 CGGTTG 136447 |||||| Sbjct 935 CGGTTG 940 >seq13808 Length=625 Score = 129 bits (142), Expect = 8e-25 Identities = 270/393 (69%), Gaps = 16/393 (4%) Strand=Plus/Plus Query 85595 ATTTCCGGGTGGCTGATGTCCAGATAGACGGCGTTGGAGCCCCGGCGCGTGCCGCCTTGG 85654 ||||||||||| ||||||||||||| | || |||||||||||| ||||||| Sbjct 22 ATTTCCGGGTGATCGATGTCCAGATAGGCCGCAGCCGAGCCCCGGCGCAGCGAGCCTTGG 81 Query 85655 CTGACGGCGAGAATCAGGCGATCGTCCACCGCC---ATGAACGGGATCACGCCGGTCGAC 85711 | || || | || ||| ||||| | | ||||| || || | ||| | || | Sbjct 82 GAAATCGCCAGGGTGAG-CGA--GTCCATCACGCGGATGAAAGGAATGATGCCCGACGTC 138 Query 85712 TGCGAACCCTTC-GA--GGTCTTCTCGCCCAGGCCGCGCAGGGCGCCGTAGTAGGAGCCG 85768 || || ||| || | ||||||||| | ||||| |||| |||||| |||| Sbjct 139 TGG---CCATTCTGACCGACCTTCTCGCCGATAGAGCGCACACCGCCCCAGTAGGTGCCG 195 Query 85769 ATGCCGCCGCCCATCGACGAGAGCCAGATGACCTC-GTCATAGTGCTCG-GAGATCGACT 85826 |||||||| || | || | ||||||| ||| ||| |||| | || ||| | Sbjct 196 ATGCCGCCACCGTTGGAGGCCAGCCAGACATTCTCTGTCCAGGTGCCCACGATGTCGTCC 255 Query 85827 CGCGGCTGTCCTCGATCGCGGTGAGGAAGCAGGAGATCGGCAGGCCGCGCGCGGACCCGC 85886 ||| | | | | || | | | ||||||||||||||||||||||||| | | |||| Sbjct 256 AGCGAAT--CGTGAACCGAGTTCAAGAAGCAGGAGATCGGCAGGCCGCGCTCTGCGCCGC 313 Query 85887 CGTTCGACAGCAGGGGCGTGGCGAACATGAACCAGAGGTTCGAGACATAGTCGTAGAGCC 85946 | || ||||| | ||||| || ||||||||| |||||||| | ||||| || || | Sbjct 314 CATTGGACAGGACCGGCGTTGCCGGCATGAACCACAGGTTCGACATGTAGTCATAAAGGC 373 Query 85947 GCTGGCCGTGCTCGGCGTCATCCGCGAAGGCCG 85979 ||||| |||||||| || || || |||||| Sbjct 374 GCTGGGCGTGCTCGATATCGTCGGCATAGGCCG 406 >seq7 Length=75526 Score = 113 bits (124), Expect = 6e-20 Identities = 364/560 (65%), Gaps = 30/560 (5%) Strand=Plus/Plus Query 83787 GGCCCAGTTCGCCCAGGCGCTTCTTCAGCCAGCGGTTCTTGACGGCGAACGAGCCCGACA 83846 ||||| ||| ||||| |||| |||| |||||| || | |||||| || | Sbjct 20119 GGCCCTTTTCTTCCAGGAGCTTGGTCAGGTGACGGTTCCGCACATTGTGCGAGCCAGAGA 20178 Query 83847 GGGTCTTGTGCAGGAAGGTGTTGGCCGGGATCGGCTCGATCGACGGCGAGGTGCCCCCGC 83906 | |||||||| ||| ||||||| | ||| ||||| || | ||| ||||| |||| Sbjct 20179 GCGTCTTGTGGGTAAAGCTGTTGGCTGCGATGGGCTCAATGCCTGCCGACGTGCCACCGC 20238 Query 83907 AAAGGATCGAGGACGAGGCGTTGGGCGCCACGGCCAGCTTGTGGGCGAACCGCTCGCCCG 83966 ||| ||||||| || ||| | || ||||| || ||||| || ||| ||||| | Sbjct 20239 AAATGATCGAGATGGACGCGGTTGGTGCCACAGCTGACTTGTTGGAGAAGCGCTC---CA 20295 Query 83967 TGCCTTCCAT-GTCCGGCGCCTCG---------CCGCGCTCCTTGCCCAGCAGCAGGGAA 84016 || | |||| ||| | ||| ||| || ||||| | ||||| | || Sbjct 20296 TGA-TGCCATAGTCTGCCGCATCGGGACATGCGCCCCGCTCTTCCGCCAGCTTCTTTGAG 20354 Query 84017 GCCGCATCGGCCTGCTTGCGCATGTGGACGAACAGTTCCAGGTTCAGCCGGCGGGCGGCG 84076 |||||||| ||||| | || || ||| | | | |||| | | | || | Sbjct 20355 GCCGCATCTGCCTGGTCATCAATATGCTTGAAGATCTTCTTGTTC--CAGACCTTCGCCA 20412 Query 84077 TGACTC--TCGAACGGGAT------GTCCAGCATCTGGAGCAGCGAGTGGAAGCCGAGCA 84128 | || | || |||||||| | || |||| | || ||||||||||| | | Sbjct 20413 TCACACCTTCAAACGGGATCATGTTGGCCTGCAT-----GAAG-GAGTGGAAGCCCATAA 20466 Query 84129 GGCCCAGGCCCACCGACCGTTCGCGCACGGCGCTGTAGGCGGCGCGGTGCATCTCGTCCG 84188 ||| |||||||| || |||||||||| ||| || ||| || ||| ||||| | Sbjct 20467 CGCCAAGGCCCACAGAACGTTCGCGCATGGCAGAATATTTGGCCTGGGCCATTTCGTCTG 20526 Query 84189 GCGCGTTGTCGATGAACACCTGGAGGCAGTTGTCCAGCATGCGCAGCAGGTCTTCGATGA 84248 | ||| |||||| || |||| ||| ||||| || | ||||| || |||||||| | Sbjct 20527 GTGCGCGGTCGATAAAGTCCTGAAGGACATTGTCGAGGAAGCGCATCACATCTTCGATAA 20586 Query 84249 AGGTCGGGTGATCCCGCCACTCCGGCCACTTCTCGGCGTTGACGCTGGAGAGGCAGCAGA 84308 | ||| || ||| ||| | ||||||| || | | |||||| ||||||| Sbjct 20587 ACTGCGGATGGCTTTCCCATTCCTGGAACTTCTCAATATTCAAGGAGGAGAGACAGCAGA 20646 Query 84309 CGGCGGTCCGCATCTTGCCG 84328 | ||||| || ||||||| Sbjct 20647 CCGCGGTGCGTGCCTTGCCG 20666 >seq3894 Length=1582 Score = 93.3 bits (102), Expect = 6e-14 Identities = 219/324 (68%), Gaps = 10/324 (3%) Strand=Plus/Plus Query 82857 TACTCGTGCTTCTCGCGCATCGCCTCGTAGTCGAGGAAGGCGCGGAACTCGACCTCGGGC 82916 || |||||||| | |||| ||||||| || | ||||||| ||||||| |||||| Sbjct 1005 TAGTCGTGCTTGGCCGCCATCTCCTCGTACTCCATGAAGGCGGAGAACTCGGTGTCGGGC 1064 Query 82917 AGGCCCAGGGTGTCGATCAGCGTCGAGTAGGCGTCGATATGGTTGGCCTCGGCGGCGATG 82976 | ||| | || || | || || ||||||| |||| || | ||| | | | Sbjct 1065 ATGCCGATCGTCTCAAGCAATAGCGCGTAGGCGGCGATGTGAACCGTCTCCATGTTGGAG 1124 Query 82977 AACGCGCCCAGCATCATCCGCACTTCCGGGTGCGGGAAGCGCGGGCCGTACTTCTCGAAG 83036 || || ||||||||| |||||||| || |||| |||| ||| || || | | Sbjct 1125 AAGGCCGACAGCATCATGCGCACTTCAACCGGCTTGAAGAGCGGCATGTAGTTTTCCATG 1184 Query 83037 TAGCCGCGCGCC-ACGTCGACGTCGGCCTGGGTGAAGAACCGGAAGAGTTGCGTCAGCAG 83095 ||| ||||| || || ||||| | |||||||||||| ||||| | || |||||||| Sbjct 1185 TAGTTA-GCGCCGACTTCCACGTCCGACTGGGTGAAGAAGCGGAAAATCTGGGTCAGCAG 1243 Query 83096 ---GGACTTCTCGTCCGGCGTCAGCTT-CTCGTTCCAGTCCTGGATGTCCTGGTCCATGG 83151 | || || ||| |||||||| ||| |||||||| | ||||| | | | Sbjct 1244 ATTGCGCTCCTTGTC---GGTCAGCTTGGTCG-CCCAGTCCTTGCAGTCCTCACCGAGCG 1299 Query 83152 GGGCTTCGTGCGGAAGCCAGTGCA 83175 | | || | ||| |||||||||| Sbjct 1300 GCACCTCTTCCGGCAGCCAGTGCA 1323 >seq781 Length=5346 Score = 89.7 bits (98), Expect = 7e-13 Identities = 164/235 (70%), Gaps = 8/235 (3%) Strand=Plus/Plus Query 89329 CTTGCCTTCGCGCGCCAGGGTCGATAGGTGGATGATCGGATTGTCCTGGGCCTGCCGGTG 89388 || ||| |||||||||| || | | | ||||||| | | || ||||| || || Sbjct 609 CTGGCCCTCGCGCGCCATTGTGGCCAAGCGGATGATGGCGCTCTCGGATGCCTGTCGATG 668 Query 89389 GATTTCCGACAGGAAGAAGTCCGGATC---ATTGGCCAGCAGGCCCGCGTCGTCCTCGAC 89445 ||| || | ||| | | |||||||| ||||| | |||||| |||| ||| || Sbjct 669 GATCTCGGTCAGCATCACATCCGGATCGACATTGGTGA--AGGCCC-CGTCTCCCTTGAT 725 Query 89446 CGGGGGAAGCTGACCAGGATCGCCCATGGCGAAGATCGGCACCCCGTATTCCATCAGGTC 89505 ||||||||||||||| ||||| |||| | | ||| || | | ||||||||| Sbjct 726 CGGGGGAAGCTGACCGGGATCACCCAGCACAAGGATGGGTTTTTTGAAACTCATCAGGTC 785 Query 89506 GTCGGTCATC-CGGCGCCCGACCATGGACGCCTCGTCGACGACGATCAGGCTCGC 89559 | | |||| | ||||| ||||||||| ||||||||| |||||||| || || Sbjct 786 GCGCGCCATCTCCTCGCCC-ACCATGGACACCTCGTCGAGCACGATCAGCCTGGC 839 >seq3432 Length=1729 Score = 86.0 bits (94), Expect = 9e-12 Identities = 68/81 (84%), Gaps = 2/81 (2%) Strand=Plus/Minus Query 103074 ACGCGGGGTAGAGGAGTCCGGTTGTCCTCGTCTGGCTCATAACCAGGAGATCGTGGGTTC 103133 ||||||| | ||| |||||||| | |||||| ||||||||||| | || |||| ||||| Sbjct 1057 ACGCGGGATGGAGCAGTCCGGTAG--CTCGTCAGGCTCATAACCTGAAGGTCGTAGGTTC 1000 Query 103134 AAATCCCACTCCCGCTCCCAA 103154 |||||| |||||||| ||||| Sbjct 999 AAATCCTACTCCCGCACCCAA 979 >seq1053 Length=4254 Score = 86.0 bits (94), Expect = 9e-12 Identities = 188/279 (67%), Gaps = 2/279 (1%) Strand=Plus/Minus Query 148420 CGGGCTTCTGGTAGAAGCGCTCGGGCAGGCCGTCGATCTGCTCGACATTGAACACCAGAT 148479 ||||||| |||| || | ||||||||||| |||||||| ||||| |||||||| | Sbjct 4080 CGGGCTTGGTGTAGTAGTGATCGGGCAGGCCTTCGATCTGTTCGACGTTGAACACTGTGT 4021 Query 148480 AGGACTTCAGGAACGGGATCATCCGTTCGACGTCCTTGCCGTTGGCGTCCTTCTCGGTCT 148539 | | ||||| ||| ||||| | ||||| | || | |||| || | || || |||| Sbjct 4020 AAGCCTTCATGAAGGGGATTTTGCGTTCCTCTTCGCTCCCGTCTGCTTGCTCTTCAGTCT 3961 Query 148540 TCTTGAACTTCGAGGCGTAGACGATCAGTTCGGACTTCTCGCCCTTGCGGACCTGACCAC 148599 | ||| | ||| || || | | | | ||| ||||| || ||| | ||| Sbjct 3960 TGGTGACGGTGTTGGCATAAACAACGGGGTTGCCCTTTTCGCCTTTCTTGACATTTGCAC 3901 Query 148600 CCAGGTCCCTGGCTTGGTTGTAGGTCATCCAGGTCGG-GTTGGTGTAGCCGCGCTCCTGG 148658 | || || |||| || ||| | ||||||||| ||| | || | |||| ||| || Sbjct 3900 CAAGCTCTTTGGCCTGTTTGAATGTCATCCAGTACGGCGATGAAAAACCCGC-CTCTAGG 3842 Query 148659 GCGGCGGCCCACAGGAGGACCACGTTGATCCCGGTGTAG 148697 ||||| ||||||| | || | || |||||| | ||| Sbjct 3841 GCGGCACCCCACAGCATGAGGATATTAATCCCGCTATAG 3803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 701217868777920