Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019443.1 Length=172879 Score E Sequences producing significant alignments: (Bits) Value seq9616 277 2e-69 seq15666 217 2e-51 seq10300 167 3e-36 seq14097 118 1e-21 >seq9616 Length=845 Score = 277 bits (306), Expect = 2e-69 Identities = 392/545 (72%), Gaps = 6/545 (1%) Strand=Plus/Plus Query 162940 GGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTACATG 162999 || ||||| |||| ||| | ||||| || |||||| ||| || || |||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 163000 TTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGCA 163059 || || ||||||||||| |||| ||| ||||||| || ||||| || | ||||| ||| Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 163060 GGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCTT 163119 | ||| ||||| || || || || ||||||||||| || || | || ||||| ||||| Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 163120 AT--CAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAG 163177 | |||||| ||| || | | | |||| || | || |||| |||||||| | | Sbjct 188 CTTGCAGAGACACTTG-GATCTA-ACTCACTCAATTCAGGCTATATATTCGGACAGTAGG 245 Query 163178 AAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTA-T 163236 | ||||| || | ||| || || ||||||||||||||| | | || |||||||| Sbjct 246 ATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACA 305 Query 163237 GCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGC 163296 | | |||| ||||||||| | | ||||||||||| || |||| || || | | Sbjct 306 GTAGCTTT-AACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGT 364 Query 163297 ATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTC 163356 || |||||||| | | || || || || ||||| || ||| | || ||| | |||||| Sbjct 365 ATATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTC 424 Query 163357 AACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAAC 163416 ||| |||| | || ||| ||| ||| | | ||| || ||||| || || ||||| Sbjct 425 AACGAATCACTTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAAT 484 Query 163417 AGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGAC 163476 ||||||| || ||||||||||| ||||| ||| | ||||| |||||||||||||| || Sbjct 485 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGAT 544 Query 163477 CTTGC 163481 || || Sbjct 545 CTAGC 549 >seq15666 Length=534 Score = 217 bits (240), Expect = 2e-51 Identities = 375/536 (70%), Gaps = 9/536 (2%) Strand=Plus/Plus Query 162940 GGTCAAGGTTCTTTCTCTGACGCAATGCCTCTTGGTATTTCTGGTACTTTTAACTAC-AT 162998 || ||||| |||| ||| | ||||| || |||||| ||| || || |||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 162999 GTTCGTGTTCCAAGCAGAGCACAACATCCTAATGCACCCCTTCCATATGATTGGAGTCGC 163058 ||| || ||||||||||| |||||||| |||||||||| ||||| || | ||||| || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 163059 AGGTGTATTCGGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTCTCT 163118 || ||| || || || || || || ||||||||||| || || | || ||||| ||||| Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 163119 --TATCAGAGAAACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAA 163176 | |||||| ||| || | | | |||| || | || |||| | | ||| || Sbjct 184 ACTTGCAGAGACACT-TGGATCTA-ACTCACTCAATTCAGGCTATATATGTGAACAGGAG 241 Query 163177 GAAGAGACTTACAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTA- 163235 || ||||| || | ||| || || ||||||||||||||| | || |||||||| Sbjct 242 GATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTAC 301 Query 163236 TGCATCTTTCAACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTG 163295 | | |||| ||||||||| | || ||||||||||| || |||| || || | | Sbjct 302 GGTAGCTTT-AACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGG 360 Query 163296 CATCTGGTTCACTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTT 163355 || |||||||| | | || | || || ||||| || ||| | || | | | | Sbjct 361 TATATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCT 418 Query 163356 CAACCAATCCGTCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAA 163415 ||| |||| | || ||| ||| | | | | ||| || ||||| || || ||||| Sbjct 419 CAATGAATCACTTGTAGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAA 478 Query 163416 CAGAGCAGGACTTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCAC 163471 ||||||| || ||||||||||| ||||| ||| | ||||| ||| ||||||||| Sbjct 479 TAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 167 bits (184), Expect = 3e-36 Identities = 290/415 (70%), Gaps = 5/415 (1%) Strand=Plus/Minus Query 163069 GGTGGTTCACTCTTTAGTGCTATGCACGGTTCTCTTGTTACTTCTTC-TCTTATCAGAGA 163127 || || || || || ||||||||||| || || | || ||||| || | | | |||| Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCCTACTTGCGGAGA 649 Query 163128 AACTACTGAGCAAGAGTCACAGAACTACGGTTATAAGTTCGGACAAGAAGAAGAGACTTA 163187 ||| || | | | |||| || | || |||| |||||||| || || ||||| || Sbjct 648 CACTTG-GATCTA-ACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATA 591 Query 163188 CAACATTGTTGCTGCTCATGGATACTTTGGTCGCTTGATCTTCCAGTATGC-ATCTTTCA 163246 | ||| || || ||||||||||||||| | | || ||||| || | | |||| | Sbjct 590 TAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTT-A 532 Query 163247 ACAACTCACGTTCACTTCACTTCTTCCTTGCTGCATTCCCTGTGGTCTGCATCTGGTTCA 163306 |||||||| | || ||||||||||| || |||| || || | | || ||||||| Sbjct 531 ACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCA 472 Query 163307 CTGCAATGGGTGTGTCAACTATGGCATTCAACCTTAACGGTTTCAACTTCAACCAATCCG 163366 | | | || || || || ||| | || ||| | || || | |||||||| |||| Sbjct 471 CCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCAC 412 Query 163367 TCGTTGACGCAGGTGGTAAAGTGATTCCTACTTGGGCAGATATCCTTAACAGAGCAGGAC 163426 | || ||| ||| ||| | | ||| || ||||| || || ||||| ||||||| | Sbjct 411 TTGTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACC 352 Query 163427 TTGGTATGGAAGTTATGCACGAGCGTAATGCTCACAACTTCCCACTTGACCTTGC 163481 | ||||||||||| ||||| ||| | ||||| ||| |||||||||| || || || Sbjct 351 TAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq14097 Length=611 Score = 118 bits (130), Expect = 1e-21 Identities = 116/149 (78%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 162601 GCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCA 162660 ||||||||| |||||||||||| || || |||| |||||||||||||| ||||| Sbjct 70 GCATTCATTCTAGCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGC 129 Query 162661 CTTCTCTATGGTAACAACATC--ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTG 162718 || || ||||||||||||||| || | || || || | || ||||| |||||||| | Sbjct 130 CTCCTATATGGTAACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAG 189 Query 162719 GTCTTCACTTCTATCCTATCTGGGAAGCA 162747 | ||||||| ||||| | ||||||||| Sbjct 190 GAGTTCACTTTTATCCAGTATGGGAAGCA 218 Score = 118 bits (130), Expect = 1e-21 Identities = 116/149 (78%), Gaps = 2/149 (1%) Strand=Plus/Plus Query 162601 GCATTCATTGCAGCACCTCCAGTTGATATCGATGGTATCAGAGAACCTGTTGCAGGTTCA 162660 ||||||||| |||||||||||| || || |||| |||||||||||||| ||||| Sbjct 416 GCATTCATTCTAGCACCTCCAGTAGACATAGATGTAATCAGAGAACCTGTAGCAGGAAGC 475 Query 162661 CTTCTCTATGGTAACAACATC--ATCTCTGGTGCTGTCGTTCCTAGTTCAAATGCTATTG 162718 || || ||||||||||||||| || | || || || | || ||||| |||||||| | Sbjct 476 CTCCTATATGGTAACAACATCTAATAACAGGAGCAGTAATACCAAGTTCTAATGCTATAG 535 Query 162719 GTCTTCACTTCTATCCTATCTGGGAAGCA 162747 | ||||||| ||||| | ||||||||| Sbjct 536 GAGTTCACTTTTATCCAGTATGGGAAGCA 564 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552970193915880