Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019444.1 Length=176043 Score E Sequences producing significant alignments: (Bits) Value seq8042 295 8e-75 seq9616 232 8e-56 seq15666 178 1e-39 seq10300 159 4e-34 >seq8042 Length=962 Score = 295 bits (326), Expect = 8e-75 Identities = 621/918 (68%), Gaps = 15/918 (2%) Strand=Plus/Minus Query 164715 GGCACAGCTTTTGTCACGAGTTGGTACACCCATGGTCTTGCTTCTTCCTATCTTGAAGGT 164774 |||||| | |||||||| |||||| || |||||| | || || || | ||||| Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 164775 GCTAACTTTCTCACAGCAGCTGTCTCGACGCCTGCTGATGCTATGGGTCATTCTCTTCTT 164834 ||||||| | |||||||| || || || ||| || ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 164835 CTACTTTGGGGTCCTGAGTCTCAGGGGAATTTC-CAGCGGTGGTGCCAACTTGGGGGAC- 164892 ||| | ||||| || || | || || |||| || | || |||| ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAA----GATGAACACTTATGGGCTC 787 Query 164893 --TATGGAATTTCGTGGCTCTCCACGGTGCCTTCGCCCTAATTGGTTTCATGCTCCGCCA 164950 |||||| ||| | || | ||| ||| || | || || || | | || Sbjct 786 TTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTTTGTTTAAGGCA 727 Query 164951 GTTTGAGCTGGCACGTCTCATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCC 165010 ||||||| | || | | | |||| ||||| ||||||||| | || ||| | || || Sbjct 726 GTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGCCC 667 Query 165011 TAT--TGCTGTTTTTGTCAGCGTCTTCCTTATCTACCCACTGGGTCAGTCCAGTTGGTTT 165068 ||| | || | | |||| || || | || ||||| | ||||| ||| |||||| Sbjct 666 TATAATACTATACATATCAGTGT--TCGTCATTTACCCTTTAGGTCAATCCTCTTGGTTC 609 Query 165069 TTCGCTCCGTCCTTTGGGGTGGCAGCAATCTTTAGATTCCTGTTGTTCCTTCAAGGATTC 165128 || || || || ||| || ||||| ||||| || ||||| | ||||| ||||| || Sbjct 608 TTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTTT 549 Query 165129 CACAACTGGACCCTCAACCCCTTCCATATGATGGGTGTTGCAGGTATCTTGGGAGGAGCA 165188 ||||| ||||| || ||||| |||||||||||||| | ||||| |||||||||| ||| Sbjct 548 CACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGCT 489 Query 165189 TTGCTATCTGCTATTCATGGAGTCACAGTTGAAAATACATTATACGAGGATGG-AGAGCA 165247 | |||| ||||| ||||| | |||||| | || || |||| | ||||| ||| Sbjct 488 CTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGTCAAGCT 429 Query 165248 GGCAAATACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGACTTATTCTATGGTCAC 165307 || | ||||| | | || | | || || || |||||||| |||||| | || Sbjct 428 TACACA-ACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTAAC 370 Query 165308 TGCAAACCGCTTCTGGTCGCAGATCTTCGGCATTGCGTTTTCTAACAAGCGGTGGCTTCA 165367 || || | |||||||| || | |||| | || ||||| || ||| | |||||||| Sbjct 369 AGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTTCA 310 Query 165368 TTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTTTGGACATCCTCTATTGGCATTATTGG 165427 || ||| | | || || || || || | ||||| || ||||| || || || || Sbjct 309 CTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATAGG 250 Query 165428 TCTTGCTCTCAACCTTCGTGCTTACGATTTCGTGAGTCAGGAGATCAGAGCAGCAGAAGA 165487 || || |||||||| | || || || || | ||||||| | | || ||||| || Sbjct 249 ACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAGAGGA 191 Query 165488 TCCAGAATTTGAGACCTTCTACACCAAAAACATCCTATTGAATGAAGGACTACGTGCTTG 165547 ||||| |||||||| ||||| || || ||||| ||| | |||||||| | ||| || Sbjct 190 CCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTATG 131 Query 165548 GTTGGCACCTGCTGATCAACCCCATGAAAACTTTATCTTCCCAGAAGAAGTATTGCCTAG 165607 | ||||| || ||||| ||||| ||||| ||||| || |||||| | || || Sbjct 130 GATGGCAGTCCAAGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTCCAAG 71 Query 165608 AGGCAACGCCCTTTAATA 165625 ||||||| | || || || Sbjct 70 AGGCAACTCACTATAGTA 53 >seq9616 Length=845 Score = 232 bits (256), Expect = 8e-56 Identities = 381/545 (70%), Gaps = 6/545 (1%) Strand=Plus/Plus Query 163333 GGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCACATTCAACTACATG 163392 || ||||| |||| ||| | |||||||| || || ||| || ||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 163393 CTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTCGCT 163452 | || ||||||||||| |||| ||| | ||||| || ||||| || || ||||| || Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 163453 GGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGTTACCTCTTCACTC 163512 | ||| ||||| ||||| || ||| || |||||||| | || || || || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 163513 GTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTTTGGTCAAGAAGAA 163572 | ||||| || | || | |||| || | || || | || || || | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 163573 GAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATA-TGC 163631 |||||||| | ||| ||||||||||| ||||| ||| | | || ||||| || | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 163632 ATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCCTGTCGTCGGAAT 163691 | | || |||||| ||||| | ||||||||||| ||||||||||| || | || || Sbjct 308 AGC-TTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 366 Query 163692 CTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAA 163751 ||||| || | || || ||| || ||||| || ||| | || ||| | |||||||| Sbjct 367 ATGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAA 426 Query 163752 CCAGTCCATCCTTGATGGTCAG--GGTCGTGTGCTCAACACTTGGGCAGACGTGCTTAAC 163809 | | || | | || |||| |||| | | | ||||| ||||| ||| | ||||| Sbjct 427 CGAATCACTTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAAT 484 Query 163810 CGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCACTCGAT 163869 | || | || ||||||||||| ||||||||| | || ||||||||||||||||| ||| Sbjct 485 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGAT 544 Query 163870 CTTGC 163874 || || Sbjct 545 CTAGC 549 >seq15666 Length=534 Score = 178 bits (196), Expect = 1e-39 Identities = 363/535 (68%), Gaps = 7/535 (1%) Strand=Plus/Plus Query 163333 GGTCAAGGTTCTTTCTCTGACGCAATGCCACTTGGCATCTCTGGCACATTCAACTAC-AT 163391 || ||||| |||| ||| | |||||||| || || ||| || ||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 163392 GCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTCGC 163451 | | || ||||||||||| |||||||| | |||||||| ||||| || || ||||| || Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 163452 TGGTGTCTTCGGTGGATCACTCTTCTCGGCAATGCATGGCAGTCTTGTTACCTCTTCACT 163511 | ||| || || ||||| || ||| || |||||||| | || || || || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 163512 CGTCCGTGAGACGACTGAAACTGAGTCACAAAACTATGGTTACAAGTTTGGTCAAGAAGA 163571 | ||||| || | || | |||| || | || || | | || || || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 163572 AGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTGATCTTCCAATATGC 163631 |||||||| | ||| ||||||||||| ||||| ||| | || ||||| || | Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 163632 ATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGGCCTGTCGTCGGAAT 163691 || |||||| ||||| || ||||||||||| ||||||||||| || | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 163692 CTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAACGGTTTCAACTTCAA 163751 ||||| || | || || | | || ||||| || ||| | || | | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 163752 CCAGTCCATCCTTGATGGTCAG--GGTCGTGTGCTCAACACTTGGGCAGACGTGCTTAAC 163809 | || | | || |||| | || | | | ||||| ||||| ||| | ||||| Sbjct 422 TGAATCACTTGTAGA--CTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAAT 479 Query 163810 CGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACAACTTCCCAC 163864 | || | || ||||||||||| ||||||||| | || |||||| ||||||||| Sbjct 480 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCAC 534 >seq10300 Length=803 Score = 159 bits (176), Expect = 4e-34 Identities = 228/319 (71%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 163558 TTTGGTCAAGAAGAAGAGACATACAACATCGTTGCAGCACATGGCTACTTCGGTCGTTTG 163617 || || || || || |||||||| | ||| ||||||||||| ||||| ||| | | Sbjct 613 TTCGGACAGGAGGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTA 554 Query 163618 ATCTTCCAATATGCATCATTCAACAACAGCAGAAGTCTTCACTTCTTCCTGGCAGCATGG 163677 || |||||||| | || |||||| |||||||| ||||||||||| ||||||||| Sbjct 553 ATATTCCAATACGGTAGCTTTAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGG 494 Query 163678 CCTGTCGTCGGAATCTGGTTTACTGCACTGGGCGTAAGCACCATGGCATTCAACCTCAAC 163737 || || | || || ||||| || | || || ||| || ||| | || ||| | || Sbjct 493 CCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAAT 434 Query 163738 GGTTTCAACTTCAACCAGTCCATCCTTGATGGTCAG--GGTCGTGTGCTCAACACTTGGG 163795 || | |||||||| | || | | || |||| |||| | | | ||||| |||| Sbjct 433 GGCCTGAACTTCAATGAATCACTTGTAGA--CTCAGAAGGTCATCTAATTAACACATGGG 376 Query 163796 CAGACGTGCTTAACCGCGCTGGTCTGGGTATGGAAGTTATGCATGAGCGTAACGCACACA 163855 | ||| | ||||| | || | || ||||||||||| ||||||||| | || |||||| Sbjct 375 CCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACG 316 Query 163856 ACTTCCCACTCGATCTTGC 163874 |||||||||| ||||| || Sbjct 315 ACTTCCCACTAGATCTAGC 297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 563092895930760