Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019516.1 Length=161440 Score E Sequences producing significant alignments: (Bits) Value seq8042 325 4e-84 seq9616 248 9e-61 seq15666 190 2e-43 seq10300 168 7e-37 seq80 82.4 8e-11 >seq8042 Length=962 Score = 325 bits (360), Expect = 4e-84 Identities = 628/916 (69%), Gaps = 23/916 (3%) Strand=Plus/Minus Query 9923 GGCACTACGTTTGTCACGAGTTGGTACACTCACGGACTTGCAAGTAGTTACCTTGAGGGT 9982 ||||| || |||||||| |||||| || || || | ||||| ||| | || || Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 9983 GCTAATTTCCTTACAGCGGCTGTCTCAACGCCTGCTGATGCTATGGGTCATTCTCTTCTT 10042 ||| || | ||||| || || || || ||| || ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 10043 CTACTTTGGGGTCCTGAGTCTCAGGGAGATTTCGTCCGCTGGATCCAGCTTGGGGGACTC 10102 ||| | ||||| || || | || || |||| | || | || ||| ||| ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAA--CA-CTTATGGG-CTC 787 Query 10103 T----GGGCTTTTGTGGCGCTCCACGGAGCCTTCGCTTTAATCGGCTTTATGTTACGCCA 10158 | || | || | | | ||| | ||| || | || |||||| ||| | || Sbjct 786 TTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTTTGTTTAAGGCA 727 Query 10159 GTTTGAGCTGGCGAGATTAATTGGAATCCGACCTTACAATGCTATCGCGTTTTCTGGGCC 10218 ||||||| | || || ||| | | || || || ||||||||| | || || | || || Sbjct 726 GTTTGAGATAGCCAGCTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGCCC 667 Query 10219 TAT--TGCTGTTTTTGTCAGTGTTTTCCTCATCTATCCACTCGGACAGTCTAGTTGGTTC 10276 ||| | || | | |||||||| | |||| || || | || || || ||||||| Sbjct 666 TATAATACTATACATATCAGTGTT--CGTCATTTACCCTTTAGGTCAATCCTCTTGGTTC 609 Query 10277 TTTGCGCCGAGTTTCGGCGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTT 10336 ||||| || || | || || || || || ||| | ||||| || ||||| || |||||| Sbjct 608 TTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCTTT 549 Query 10337 CATAATTGGACGCTCAATCCCTTCCATATGATGGGAGTTGCTGGTATACTGGGAGGGGCG 10396 || |||||||| || || || ||||||||||||||| | || || || |||||| || Sbjct 548 CACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAGCT 489 Query 10397 CTCCTATCAGCAATCCACGGAGTCACTGTAGAAAACACACTTTATCAAGATGGCGAACAA 10456 || ||||||| || || || | ||| |||| ||||| | ||||||||||| ||| Sbjct 488 CTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGG---TCAA 432 Query 10457 GCAAAC---ACTTTCAAAGCTTTTGATAGCACTCAAGAAGAAGAGACCTATTCGATGGTT 10513 || || || |||| | | || | || ||| || ||||| || || ||| | Sbjct 431 GCTTACACAACCTTCAGATCATTCTCTCCAACGCAACCTGAGGAGACTTACTCTATGCTA 372 Query 10514 ACTGCTAACCGTTTCTGGTCCCAGATATTTGGAATTGCTTTTAGCAATAAACGCTGGCTT 10573 || ||||| | |||||||| || || | ||| | || ||| |||||| | |||||| Sbjct 371 ACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGGCTT 312 Query 10574 CATTTCTTTATGCTGTTTGTACCTGTTATGGGTCTTTGGACCTCTTCTATTGGAATCATT 10633 || ||||| | || || ||||| || || | |||||||||||||| ||||| || Sbjct 311 CACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATAATA 252 Query 10634 GGTCTTGCTCTCAATCTTCGTGCTTACGATTTTGTATCTCAAGAGATCAGGGCGTCAGAA 10693 || || || |||| ||| | || || || ||| ||||||| ||| | | ||| |||| Sbjct 251 GGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGAG-TAAAGGCTGCAGAG 193 Query 10694 GATCCTGAATTTGAGACGTTCTATACGAAGAATATCCTTCTGAACGAAGGTCTTCGTGCA 10753 || || || |||||||| |||||||| ||||| || || || || |||||| | ||| | Sbjct 192 GACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGTTTA 133 Query 10754 TGGATGGCA--CCAGTTGACCAACCACACGAAAGCTTTGTTTTCCCAGAAGAAGTTCTTC 10811 ||||||||| ||| || ||||| || || | ||| ||||| || ||||| |||| Sbjct 132 TGGATGGCAGTCCA--AGAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTACTTC 75 Query 10812 CTAGAGGTAATGCACT 10827 | ||||| || |||| Sbjct 74 CAAGAGGCAACTCACT 59 >seq9616 Length=845 Score = 248 bits (274), Expect = 9e-61 Identities = 372/526 (71%), Gaps = 2/526 (0%) Strand=Plus/Plus Query 8706 TGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAACTATATGCTTGTCTTCCAGGCTGA 8765 |||||||||||| || ||||| || || ||||||| |||| | || ||||| || || Sbjct 25 TGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATGTTAGTATTCCAAGCAGA 84 Query 8766 GCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGATC 8825 |||| ||| | ||||| || |||||||| | || || || | ||| ||||| ||||| Sbjct 85 ACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCAGCTGTTTTCGGAGGATC 144 Query 8826 TCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCGA 8885 ||| || || |||||||| ||| | || ||||| || || || ||||| | Sbjct 145 TCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTACTTGCAGAGACACTTGG 204 Query 8886 AACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTGT 8945 | | | || | || | ||||| | ||||| || | || || || || | ||| Sbjct 205 ATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGATGAGACATATAGCATATC 264 Query 8946 TGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATAT-GCATCTTTTAACAATTCTA 9004 || || ||||| ||||||||| | | || ||||| || | | |||| ||||| || | Sbjct 265 AGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGTAGCTTT-AACAACTCAA 323 Query 9005 GAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCG 9064 ||||| | || |||||||| || || ||||| || | || || ||||| ||| | || | Sbjct 324 GAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAG 383 Query 9065 GCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACG 9124 | || || || |||||||| ||| | ||||| | ||||||||| | || || | ||| Sbjct 384 GAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAACGAATCACTTGTAGACT 443 Query 9125 GACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGG 9184 | |||| | | | ||||| ||||| ||| ||||||| | |||| || ||||||| Sbjct 444 CAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGG 503 Query 9185 AAGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGC 9230 |||| ||||| || || || |||||||||||||| || || || || Sbjct 504 AAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATCTAGC 549 >seq15666 Length=534 Score = 190 bits (210), Expect = 2e-43 Identities = 352/514 (68%), Gaps = 3/514 (1%) Strand=Plus/Plus Query 8706 TGATGGTATGCCTCTTGGTATCTCCGGTACGTTCAAC-TATATGCTTGTCTTCCAGGCTG 8764 |||||||||||| || ||||| || || |||||| | |||| | || ||||| || | Sbjct 21 TGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTATGTTAGTATTCCAAGCAG 80 Query 8765 AGCACAACATCCTGATGCACCCCTTCCACATGCTTGGTGTTGCTGGTGTCTTCGGCGGAT 8824 | |||||||| | |||||||| |||||||| | || || || | ||| || || |||| Sbjct 81 AACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGCAGCTGTTTTTGGAGGAT 140 Query 8825 CTCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAGACCACCG 8884 |||| || || |||||||| ||| | || ||||| || || || ||||| | Sbjct 141 CTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCTACTTGCAGAGACACTTG 200 Query 8885 AAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTACAACATTG 8944 | | | || | || | ||||| | | | || || || || || || | ||| Sbjct 201 GATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGATGAGACATATAGCATAT 260 Query 8945 TTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAACAATTCTA 9004 || || ||||| ||||||||| | || ||||| || | |||||||| || | Sbjct 261 CAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGGTAGCTTTAACAACTCAA 320 Query 9005 GAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACCGCCCTCG 9064 ||||| | || |||||||| || || ||||| || | || || ||||| ||| | || | Sbjct 321 GAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACCTCTCTAG 380 Query 9065 GCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATTATCGACG 9124 | | || || |||||||| ||| | |||| | | |||| | || || | ||| Sbjct 381 GAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAATGAATCACTTGTAGACT 438 Query 9125 GACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTCGGTATGG 9184 | ||| | | | ||||| ||||| ||| ||||||| | |||| || ||||||| Sbjct 439 CAGAAGATCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTAGGTATGG 498 Query 9185 AAGTCATGCACGAAAGAAACGCACACAACTTCCC 9218 |||| ||||| || || || |||||| ||||||| Sbjct 499 AAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 168 bits (186), Expect = 7e-37 Identities = 286/413 (69%), Gaps = 1/413 (0%) Strand=Plus/Minus Query 8818 GGCGGATCTCTCTTTTCCGCAATGCATGGTTCACTCGTTACTTCTTCGCTGGTTCGTGAG 8877 || |||||||| || || |||||||| ||| | || ||||| || || || ||| Sbjct 708 GGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATC-CTACTTGCGGAG 650 Query 8878 ACCACCGAAACCGAGTCTCAAAACTATGGCTACAAGTTCGGTCAAGAAGAGGAAACTTAC 8937 || | | | | || | || | ||||| | ||||| || || || || || || Sbjct 649 ACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGGAGGATGAGACATAT 590 Query 8938 AACATTGTTGCCGCTCATGGCTACTTTGGTCGCTTGATCTTCCAATATGCATCTTTTAAC 8997 | ||| || || ||||| ||||||||| | | || |||||||| | |||||| Sbjct 589 AGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAATACGGTAGCTTTAAC 530 Query 8998 AATTCTAGAAGCTTGCATTTCTTCCTCGCTGCGTGGCCTGTGGTGGGAATCTGGTTTACC 9057 || || ||||| | || |||||||| || || ||||| || | || || ||||| ||| Sbjct 529 AACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATATGGTTCACC 470 Query 9058 GCCCTCGGCGTCTCGACCATGGCTTTCAACCTCAATGGCTTCAACTTCAACCAGTCCATT 9117 | || || || || || ||| |||| ||| | |||||| | |||||||| | || || Sbjct 469 TCTCTAGGAGTATCTACAATGACTTTTAACTTAAATGGCCTGAACTTCAATGAATCACTT 410 Query 9118 ATCGACGGACAAGGACGAGTGCTCAACACCTGGGCAGACGTACTTAACCGCGCAGGACTC 9177 | ||| | |||| | | | ||||| ||||| ||| ||||||| | |||| || Sbjct 409 GTAGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATAGAGCAGACCTA 350 Query 9178 GGTATGGAAGTCATGCACGAAAGAAACGCACACAACTTCCCGCTTGACCTTGC 9230 ||||||||||| ||||| || || || |||||| ||||||| || || || || Sbjct 349 GGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCCACTAGATCTAGC 297 >seq80 Length=23092 Score = 82.4 bits (90), Expect = 8e-11 Identities = 55/60 (92%), Gaps = 1/60 (2%) Strand=Plus/Plus Query 28886 TTAGCTCAGC-GGTAGAGCATCTCGTTTACACCGAGGCGGTCGGCGGTTCAATCCCGTCA 28944 |||||||||| || |||||||||||||||||||||| |||||||||||| ||||||||| Sbjct 1954 TTAGCTCAGCTGGGAGAGCATCTCGTTTACACCGAGAGGGTCGGCGGTTCGATCCCGTCA 2013 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 516372978888000