Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019538.1 Length=231743 Score E Sequences producing significant alignments: (Bits) Value seq9172 102 1e-16 seq7553 84.2 3e-11 >seq9172 Length=875 Score = 102 bits (112), Expect = 1e-16 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 198933 TTGGCCCCTTAGCTCAGTTGGTTAGAGCAGCCGACTCATAATCGGTTGGTCACTGGTTCG 198992 |||||||| ||||||||||||||||||| ||||||||||||| | |||| |||||||| Sbjct 449 TTGGCCCCATAGCTCAGTTGGTTAGAGCGCTCGACTCATAATCGATCGGTCGCTGGTTCG 508 Query 198993 AGTCCAGTAGGGGCCACCA 199011 ||||||| |||||||||| Sbjct 509 AGTCCAGCTGGGGCCACCA 527 >seq7553 Length=1003 Score = 84.2 bits (92), Expect = 3e-11 Identities = 69/83 (83%), Gaps = 1/83 (1%) Strand=Plus/Plus Query 198692 GGATGTGGTGAAATTGGCAGACACACTAGATTTAGGTTCTAGCGCC-ATAGGCGTGACGG 198750 |||| ||| |||||||| |||| ||||||||||||||||||||||| ||||||| || Sbjct 745 GGATATGGCGAAATTGGTAGACGCACTAGATTTAGGTTCTAGCGCCGCGAGGCGTGGGGG 804 Query 198751 TTCGAGTCCGTCCATCCCGACCA 198773 ||| ||||| || |||| |||| Sbjct 805 TTCAAGTCCCTCTATCCGCACCA 827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741295962374760