Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq486 179 1e-40 seq10619 143 8e-30 seq1036 141 3e-29 seq44 129 2e-25 seq6724 100 9e-17 >seq486 Length=7659 Score = 179 bits (198), Expect = 1e-40 Identities = 259/368 (70%), Gaps = 12/368 (3%) Strand=Plus/Minus Query 45488 AAAGAAGATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAAC 45547 || || ||||| || || || ||||| | ||||| |||||| ||| ||||||| ||| Sbjct 3273 AAGGACGATCGCACCGGCACGGGCACGCTCTCGGTCTTCGGCTACCAGATGCGCTTCAAC 3214 Query 45548 TTGCAGGA------------CGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGC 45595 | | || ||| ||||| || || || || || ||| | || | ||| Sbjct 3213 CTCGATGAGGCCACCGGCGGCGGGTTCCCACTGGTCACCACCAAGAAGGTCCACACGCGC 3154 Query 45596 TCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAG 45655 |||||||| | || ||||| ||||| | |||||||| ||||| | ||| || || Sbjct 3153 TCGATCATCCACGAGCTGCTGTGGTTCCTCAAAGGCGACACGAACATCGCCTACCTGAAG 3094 Query 45656 GAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATC 45715 || || || || || ||||||||||||||||||| |||| | |||||||| || Sbjct 3093 GACAACAAAGTCACCATCTGGGACGAGTGGGCCGATGCCGCCGGCAACCTCGGCCCGGTC 3034 Query 45716 TACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCG 45775 |||||| ||| ||||| || ||| | | | |||| | ||| ||||||| || || Sbjct 3033 TACGGCAAGCAGTGGCGCTCCTGGCGCACGCCGGGCGGGGACACGATCGACCAGATCGCC 2974 Query 45776 GCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGG 45835 | ||| | | | |||||||||||||| ||||||| ||| || |||| ||||||||| Sbjct 2973 GGTGTCGTCGATCAGATCAAGCGCAACCCCGACTCGCGCCGGCTGATTGTCAGCGCGTGG 2914 Query 45836 AACGTGGC 45843 |||||||| Sbjct 2913 AACGTGGC 2906 >seq10619 Length=779 Score = 143 bits (158), Expect = 8e-30 Identities = 376/570 (66%), Gaps = 8/570 (1%) Strand=Plus/Plus Query 45569 GTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAA 45628 ||||| || || || ||||| || |||||||| |||| ||||| |||||| | Sbjct 1 GTGACCACCAAGAAACTGCATCTCAAATCGATCATCCATGAGCTGCTGTGGTTTCTGGCG 60 Query 45629 GGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCC 45688 || ||||| || | |||| || ||| |||||| || | || |||||||| |||||| Sbjct 61 GGTGATACCAACATCGCCTATCTGAAGGCGAATGGCGTCTCAATCTGGGACGAATGGGCC 120 Query 45689 GATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGC---GGTCGTGGAAAGGG 45745 || |||||||||||||| || || |||||||| ||||||| | | | || Sbjct 121 GACGAAAACGGCGATCTGGGGCCGGTCTACGGCCATCAATGGCGCAGCTGGCCGATGCCC 180 Query 45746 GCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCG 45805 | || ||| | | ||||||| ||||| || || | || | ||||| ||||||| Sbjct 181 GATGGCGGCCATA---TCGACCAGATTGCCGCAGTGGTGAACCAGATCAAAACCAACCCG 237 Query 45806 AACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGC-AAAGTTGGGGGAAATGAAGTT 45864 || || || | || || || ||||| || || | |||| || ||| | Sbjct 238 GACAGCCGTCGACATATCGTCAGTGCCTGGAATGTCGCTGATGTTGATGG-TATGGCCCT 296 Query 45865 GCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTG 45924 ||| ||||| |||| | |||||||| || || || | ||| | | || || | Sbjct 297 GCCGCCATGCCATTGCCTGTTTCAGTTCTATGTGGCTGACGGCAAGCTTTCGTGTCAGCT 356 Query 45925 GCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCT 45984 | ||||| || ||||| ||||| || |||| || || || || ||||||||| Sbjct 357 CTACCAGCGCAGTGCCGATATCTTTCTGGGGGTGCCCTTCAATATTGCCTCCTATGCGCT 416 Query 45985 GTTGACACATATGGTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGG 46044 ||||||| | ||| ||||||| ||||| || | | ||||| | | ||| Sbjct 417 GTTGACAGAGATGATTGCCCAGGTCTGCGATCTGAAGGCGGGCGATTTTGTCCACACGTT 476 Query 46045 CGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGA 46104 || |||| ||| | || || ||||||||||| || | | |||||| | ||| || Sbjct 477 TGGTGACGCGCATCTTTATCTGAACCATCTGGAACAGGCCGACCGGCAGCTAAAGCGGGA 536 Query 46105 GCCGCGCCCGCTGCCGAAGCTCGTGATCAA 46134 | | |||||||||| ||| | |||| Sbjct 537 ACAGTTGCCGCTGCCGACACTCAAGCTCAA 566 >seq1036 Length=4296 Score = 141 bits (156), Expect = 3e-29 Identities = 209/296 (71%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 45437 ATGAAACAATATCTAGACTTGCTGCAAGACATCTTAGAAAACGGCGTGGAGAAAGAAGAT 45496 ||||||||||| || || || ||| | | |||||| ||||| ||||| || Sbjct 1690 ATGAAACAATACCTTGATTTAATGCGCCATGTATTAGAACACGGCCATAAGAAAACCGAC 1749 Query 45497 CGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGAC 45556 || || || |||||||| | ||||| ||| ||| |||| ||| | || || | Sbjct 1750 CGCACCGGCACAGGCACCATCAGTGTGTTTGGCTATCAAATGCGTTTTGATTTACAACAG 1809 Query 45557 GGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTGCTC 45616 || || ||||| || || || ||||| | ||| | || ||||| ||| ||||| | || Sbjct 1810 GGCTTTCCGCTTGTTACCACCAAAAAATGCCATCTGCGTTCGATTATTCATGAATTACTG 1869 Query 45617 TGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGG 45676 |||||||||||||| || || || || |||| |||| || ||||| || | || ||| Sbjct 1870 TGGTTTTTAAAAGGTGAAACCAACATTGGCTACCTGCAAGAAAATGGCGTATCAATCTGG 1929 Query 45677 GACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCG 45732 | |||||||| ||||| || || ||||| || | ||||||||||| ||||| Sbjct 1930 AATGAGTGGGCGACTGAAACAGGTGAGCTCGGACCGGTATACGGCGCGCAGTGGCG 1985 >seq44 Length=32007 Score = 129 bits (142), Expect = 2e-25 Identities = 458/715 (64%), Gaps = 8/715 (1%) Strand=Plus/Plus Query 45494 GATCGGACGGGAACAGGCACATTGTCGGTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAG 45553 || ||||| || |||||||| ||||||||||| | |||| |||||||| | || Sbjct 27365 GACCGGACCGGTACAGGCACGCGCTCGGTGTTCGGGCATCAGATGCGCTTTGATCTGGCC 27424 Query 45554 GACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACTG 45613 ||||| || || | || ||||| || ||| |||| | || ||| | |||| ||| Sbjct 27425 GACGGGTTTCCCATGGTCACGACTAAGAAGCTGCACTTAAAGTCCATCGTGCATGAGCTG 27484 Query 45614 CTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGATT 45673 |||||||| | ||||| || ||| || |||| | | | ||||| |||| ||| Sbjct 27485 CTCTGGTTCATCGCCGGCGACACAAATATTGCCTATCTCAAAGCAAATGGGGTGAGCATT 27544 Query 45674 TGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCGG 45733 |||||||| ||||| ||||| || || |||||||| ||| |||| || || ||||| Sbjct 27545 TGGGACGAATGGGCGGATGAGAAGGGTGATCTCGGGCCAGTCTATGGGCACCAGTGGCGC 27604 Query 45734 TCGTGGAAAGGGGCTGACGGGAAAACGGTCGACCAAATTGCGGCGGTCTTTAAGGAAATC 45793 ||| | | ||||| ||| | || || || | || | | ||| Sbjct 27605 AGCTGGCCCACGCCCGACGGCGGCACGATTGATCAGATCAAAAACCTGATTGACCAGATC 27664 Query 45794 AAGCGCAACCCGAACTCGCGGCGGTTGCTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGG 45853 || || || |||| |||||| || | ||| || ||||| ||||| | | | Sbjct 27665 GAGAATAATCCAGACTCCCGGCGGCTGATCGTGTCGGCCTGGAATGTGGCGGACGTAGAT 27724 Query 45854 GAAATGAAGTTGCCCCCATGTCATTACGCCTTTCAGTTTTACGTCGCGAATGGCCGGTTG 45913 | ||| | |||| || ||||| | || ||||| || || ||| | ||| | | Sbjct 27725 AATATGGCGCTGCCGCCCTGTCACTGTCTGTTCCAGTTCTATGTGGCGGACGGCAAGCTT 27784 Query 45914 TCATGCATGTGGCAACAGCGTTCTGTCGATACATTTCTAGGATTGCCGTTTAACATCGCT 45973 || ||| | | ||||| || | ||| || | || ||||||| |||||||| Sbjct 27785 TCCTGCCAGCTCTATCAGCGCTCCGCTGATGTGTTCTTGGGCGTGCCGTTCAACATCGCC 27844 Query 45974 AGCTATGCGCTGTTGACACATATGGTTGCCCAACAATGCGAC----CTCGATGTCGGCGA 46029 |||||||||| | || ||| | || | | | ||| ||||| || ||||| Sbjct 27845 TCCTATGCGCTGCTCTTGCAGATGATGGCGC----AGGTGACGGGGCTCGAAGTGGGCGA 27900 Query 46030 ACTCATTTTCACCGGCGGCGACGTCCATTTGTACAAAAATCATCTGGAACAAGCGAAACT 46089 |||| ||| || || | ||| | || ||||||||||||||| || | || Sbjct 27901 GTTCATCCACACTTTTGGGGATGCGCATCTCTATTCAAATCATCTGGAACAGACGGACCT 27960 Query 46090 GCAGCTGACGCGCGAGCCGCGCCCGCTGCCGAAGCTCGTGATCAAACGGAAGCCGCCGTC 46149 ||| || | || |||||||| | || || || | ||||| | | | | | Sbjct 27961 GCAATTGTCTCGAGAGCCGCGTGCCCTTCCACAGATGAAAATCAATCCGGATGTGAAGAG 28020 Query 46150 TATCTTTGACTATGAATACGAGGATTTTGAATTTGTCGGCTATGACCCGCACCCG 46204 | ||||||| || || ||||| ||| | |||||||| ||||| || ||| Sbjct 28021 CCTGTTTGACTTCACTTATGATGATTTCGAACTGGTCGGCTACGACCCTCATCCG 28075 >seq6724 Length=1088 Score = 100 bits (110), Expect = 9e-17 Identities = 130/180 (72%), Gaps = 0/180 (0%) Strand=Plus/Minus Query 45553 GGACGGATTCCCGCTCGTGACGACGAAAAAGTTGCATATCCGCTCGATCATTTATGAACT 45612 ||| || || ||| | ||||| |||||||| ||||| | ||||| ||| || ||||| | Sbjct 840 GGATGGCTTTCCGTTGGTGACCACGAAAAAACTGCATCTGCGCTCAATCGTTCATGAATT 781 Query 45613 GCTCTGGTTTTTAAAAGGCGATACGAATGTTCGCTATTTGCAGGAGAATGGTGTGACGAT 45672 | |||||||| || ||||| || | || | |||| |||||||| |||| Sbjct 780 ATTGTGGTTTTTGTCTGGTGATACCAACATCAAATACCTCAAGGAAAATGGTGTTTCGAT 721 Query 45673 TTGGGACGAGTGGGCCGATGAAAACGGCGATCTCGGCCCAATCTACGGCGCGCAATGGCG 45732 ||||||||| ||||| || |||||||| ||| | ||||| | || || |||||||| Sbjct 720 TTGGGACGAATGGGCTGACGAAAACGGTGATTTGGGCCCTGTATATGGGCATCAATGGCG 661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157719346537978