Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq486 167 4e-36 seq44 123 4e-23 seq1036 111 2e-19 seq10619 107 3e-18 seq2124 95.1 2e-14 seq2046 95.1 2e-14 seq257 95.1 2e-14 seq2943 91.5 2e-13 seq80 89.7 8e-13 >seq486 Length=7659 Score = 167 bits (184), Expect = 4e-36 Identities = 186/251 (74%), Gaps = 12/251 (5%) Strand=Plus/Minus Query 122420 GACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAA 122479 || || || ||||||||||| || ||| | |||||| || |||||||| |||| | Sbjct 3267 GATCGCACCGGCACGGGCACGCTCTCGGTCTTCGGCTACCAGATGCGCTTCAACCTCGAT 3208 Query 122480 AAAG------------GTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATC 122527 | | | ||||| |||||||| ||||| ||||| ||| ||||| ||| Sbjct 3207 GAGGCCACCGGCGGCGGGTTCCCACTGGTCACCACCAAGAAGGTCCACACGCGCTCGATC 3148 Query 122528 ATCCATGAGCTTCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAAC 122587 ||||| ||||| ||||||||||||| ||||| || |||||| || ||||| |||||| Sbjct 3147 ATCCACGAGCTGCTGTGGTTCCTCAAAGGCGACACGAACATCGCCTACCTGAAGGACAAC 3088 Query 122588 AACGTCAGTATCTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGT 122647 || |||| |||||||| || ||||| |||| | || || ||||||||||| ||||| Sbjct 3087 AAAGTCACCATCTGGGACGAGTGGGCCGATGCCGCCGGCAACCTCGGCCCGGTCTACGGC 3028 Query 122648 AAGCAATGGCG 122658 ||||| ||||| Sbjct 3027 AAGCAGTGGCG 3017 >seq44 Length=32007 Score = 123 bits (136), Expect = 4e-23 Identities = 212/300 (71%), Gaps = 6/300 (2%) Strand=Plus/Plus Query 122362 CATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAG-CAG 122420 |||| | ||||||| ||| | |||| | || |||| ||||| | ||||| | | Sbjct 27307 CATGCAGCAATATCATGACCTCATGCGCCGGATCCGAGACA-CGGGCGCTGAAAAGACCG 27365 Query 122421 ACCGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCA-CAAATGCGCTTTGACCT-GCA 122478 |||| || || || ||||| | ||| | ||||| ||| || ||||||||||| || || Sbjct 27366 ACCGGACCGGTACAGGCACGCGCTCGGTGTTCGG-GCATCAGATGCGCTTTGATCTGGCC 27424 Query 122479 AAAAGGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCT 122538 | |||||||| |||||||||| || ||| | ||| | |||||| | |||||||| Sbjct 27425 GACGGGTTTCCC-ATGGTCACGACTAAGAAGCTGCACTTAAAGTCCATCGTGCATGAGCT 27483 Query 122539 TCTGTGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTAT 122598 || |||||| || ||||| || || || ||||| |||| || || || || Sbjct 27484 GCTCTGGTTCATCGCCGGCGACACAAATATTGCCTATCTCAAAGCAAATGGGGTGAGCAT 27543 Query 122599 CTGGGATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 ||||| |||||||| ||||| | ||| ||||||| || || || || | || ||||| Sbjct 27544 TTGGGACGAATGGGCGGATGAGAAGGGTGATCTCGGGCCAGTCTATGGGCACCAGTGGCG 27603 >seq1036 Length=4296 Score = 111 bits (122), Expect = 2e-19 Identities = 202/296 (68%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 122363 ATGAAACAATATCTGGACTTACTGCGTGACGTTCGTGACAACGGGCACGAAAAAGCAGAC 122422 ||||||||||| || || ||| |||| | || || |||| || | ||| | ||| Sbjct 1690 ATGAAACAATACCTTGATTTAATGCGCCATGTATTAGAACACGGCCATAAGAAAACCGAC 1749 Query 122423 CGTACGGGCACGGGCACCCTGTCGTTATTCGGCGCACAAATGCGCTTTGACCTGCAAAAA 122482 || || ||||| |||||| | | || ||| |||||||| ||||| | ||| | Sbjct 1750 CGCACCGGCACAGGCACCATCAGTGTGTTTGGCTATCAAATGCGTTTTGATTTACAACAG 1809 Query 122483 GGTTTCCCGCTGGTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTG 122542 || || ||||| || || |||||||| || || || || || || ||||| | ||| Sbjct 1810 GGCTTTCCGCTTGTTACCACCAAAAAATGCCATCTGCGTTCGATTATTCATGAATTACTG 1869 Query 122543 TGGTTCCTCATGGGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGG 122602 ||||| | | || || |||||||| || ||| |||| || ||| |||||| Sbjct 1870 TGGTTTTTAAAAGGTGAAACCAACATTGGCTACCTGCAAGAAAATGGCGTATCAATCTGG 1929 Query 122603 GATGAATGGGCAGATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 |||| ||||| |||| ||| | ||||| ||||| ||||| ||| ||||| Sbjct 1930 AATGAGTGGGCGACTGAAACAGGTGAGCTCGGACCGGTATACGGCGCGCAGTGGCG 1985 >seq10619 Length=779 Score = 107 bits (118), Expect = 3e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 122495 GTCACGACCAAAAAGGTTCACCTCCGCTCCATCATCCATGAGCTTCTGTGGTTCCTCATG 122554 || || ||||| || | || ||| || |||||||||||||| |||||||| || | Sbjct 1 GTGACCACCAAGAAACTGCATCTCAAATCGATCATCCATGAGCTGCTGTGGTTTCTGGCG 60 Query 122555 GGCGATACCAACATCCAGTATCTGAAAGACAACAACGTCAGTATCTGGGATGAATGGGCA 122614 || |||||||||||| |||||||| | || |||| |||||||| |||||||| Sbjct 61 GGTGATACCAACATCGCCTATCTGAAGGCGAATGGCGTCTCAATCTGGGACGAATGGGCC 120 Query 122615 GATGAAGATGGTAATCTCGGCCCGGTGTACGGTAAGCAATGGCG 122658 || ||| | || |||| || ||||| ||||| | |||||||| Sbjct 121 GACGAAAACGGCGATCTGGGGCCGGTCTACGGCCATCAATGGCG 164 >seq2124 Length=2445 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 ||||||||||||||| ||||| |||| ||||||||| ||||||||||||||||||| ||| Sbjct 1627 TGTAGCTCAGTTGGT-TAGAGCGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAGTCCC 1569 Query 169792 GTCAGTCCTGCCAT 169805 |||| || ||||| Sbjct 1568 GTCACTCGCGCCAT 1555 >seq2046 Length=2500 Score = 95.1 bits (104), Expect = 2e-14 Identities = 75/89 (84%), Gaps = 1/89 (1%) Strand=Plus/Minus Query 169402 TTGGCGCGGTACTCAAGTGGTCAACGAGAGCAGACTGTAAATCTGTTGCCTTCGGGCTTC 169461 |||| | ||||| |||| |||||||| | ||||||||||||||||||| | || | |||| Sbjct 1390 TTGGAGGGGTACCCAAGCGGTCAACGGGGGCAGACTGTAAATCTGTTGGC-TCAGCCTTC 1332 Query 169462 GTAGGTTCAAATCCTTCCCTCGCCACCAA 169490 |||||||| |||||| ||| | ||||||| Sbjct 1331 GTAGGTTCGAATCCTACCCCCTCCACCAA 1303 >seq257 Length=11404 Score = 95.1 bits (104), Expect = 2e-14 Identities = 68/77 (88%), Gaps = 1/77 (1%) Strand=Plus/Plus Query 169731 TTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCC 169790 |||||||||||||||| |||||| ||| ||||||||| ||| |||||||||||||||||| Sbjct 332 TTGTAGCTCAGTTGGT-TAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGCCC 390 Query 169791 CGTCAGTCCTGCCATTT 169807 ||||| | ||||||| Sbjct 391 CGTCAACCGCGCCATTT 407 Score = 91.5 bits (100), Expect = 2e-13 Identities = 60/65 (92%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 169731 TTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCC 169790 |||||||||||||||| |||||| ||| ||||||||| ||| |||||||||||||||||| Sbjct 226 TTGTAGCTCAGTTGGT-TAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGCCC 284 Query 169791 CGTCA 169795 ||||| Sbjct 285 CGTCA 289 >seq2943 Length=1931 Score = 91.5 bits (100), Expect = 2e-13 Identities = 60/65 (92%), Gaps = 1/65 (2%) Strand=Plus/Minus Query 169731 TTGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCC 169790 |||||||||||||||| |||||| ||| ||||||||| ||| |||||||||||||||||| Sbjct 1802 TTGTAGCTCAGTTGGT-TAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAGCCC 1744 Query 169791 CGTCA 169795 ||||| Sbjct 1743 CGTCA 1739 >seq80 Length=23092 Score = 89.7 bits (98), Expect = 8e-13 Identities = 74/88 (84%), Gaps = 2/88 (2%) Strand=Plus/Plus Query 169723 TTTTAGGAT-TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGG 169781 ||||||| |||||||||| |||| ||||| || | ||||||||| | |||| |||||| Sbjct 5944 TTTTAGGGGGTGTAGCTCAGCTGGT-TAGAGCGCTGGCCTGTCACGCCAGAGGCCGCGGG 6002 Query 169782 TTCGAGCCCCGTCAGTCCTGCCATTTTT 169809 |||||| ||||||| ||| ||||||||| Sbjct 6003 TTCGAGTCCCGTCACTCCCGCCATTTTT 6030 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777470864929200