Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020080.1 Length=174413 Score E Sequences producing significant alignments: (Bits) Value seq44 95.1 1e-14 seq13573 82.4 9e-11 >seq44 Length=32007 Score = 95.1 bits (104), Expect = 1e-14 Identities = 184/269 (68%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 39321 TTGACCAGATCGCAAAAGTCATTGAACAACT-GAAATCAACCCCAGACGATCGCGGGATC 39379 |||| |||||| ||| | ||||| || | || | || || |||| || || | Sbjct 27633 TTGATCAGATCAAAAACCTGATTGACCAGATCGAGAATAATCC-AGACTCCCGGCGGCTG 27691 Query 39380 ATCGTTTCGGCATGGAACCCTGTTGATCTTGATGATATGGCATTGCGTCCGTGTCACTGT 39439 ||||| ||||| ||||| | || | ||| ||||||| ||| || ||||||||| Sbjct 27692 ATCGTGTCGGCCTGGAATGTGGCGGACGTAGATAATATGGCGCTGCCGCCCTGTCACTGT 27751 Query 39440 TTCTTTCAGTTCGTTGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTT 39499 | || |||||| ||| |||| || || || ||| |||||||| || | | Sbjct 27752 CTGTTCCAGTTCTATGTGGCGGACGGCAAGCTTTCCTGCCAGCTCTATCAGCGCTCCGCT 27811 Query 39500 GATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTATGCTCTCCTGACGCATATTATC 39559 ||||| ||||| || |||||||||| |||||||||||||| || || ||| || || Sbjct 27812 GATGTGTTCTTGGGCGTGCCGTTCAACATCGCCTCCTATGCGCTGCTCTTGCAGATGATG 27871 Query 39560 GCTGATATTTGCGGGTACGAAGTGGGCGA 39588 || | | ||| |||||||||||| Sbjct 27872 GCGCAGGTGACGGGGCTCGAAGTGGGCGA 27900 >seq13573 Length=635 Score = 82.4 bits (90), Expect = 9e-11 Identities = 120/170 (71%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 39381 TCGTTTCGGCATGGAACCCTGTTGATCTTGATGATATGGCATTGCGTCCGTGTCACTGTT 39440 |||| || || ||||| || | ||| | |||||||| ||| || || ||||| Sbjct 194 TCGTCTCTGCTTGGAATCCGGCTGACGTGCCCGATATGGCGCTGCCGCCATGCCACTGCC 253 Query 39441 TCTTTCAGTTCGTTGTAATCAACGGTAAACTGTCTCTACAGTGGTATCAGCGTTCAGTTG 39500 | |||||||| || || |||| || || | ||| ||||| ||||| | || Sbjct 254 TGTTTCAGTTTAACGTTATGGACGGAAAGCTAAATTGTCAGCTCTATCAACGTTCGGCTG 313 Query 39501 ATGTCTTCTTAGGGTTGCCGTTCAATATCGCCTCCTATGCTCTCCTGACG 39550 |||||||| | || | |||||||||||||| ||||||||| | |||||| Sbjct 314 ATGTCTTCCTTGGTGTCCCGTTCAATATCGCATCCTATGCTTTGCTGACG 363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 557877976751160