Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq1978 116 2e-20 >seq1978 Length=2579 Score = 116 bits (128), Expect = 2e-20 Identities = 144/191 (75%), Gaps = 6/191 (3%) Strand=Plus/Minus Query 474689 AAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGA-AGTAACTGATGCAGTAATTA 474746 |||||||| |||| || ||| || |||| | | || |||||| | |||||||||| Sbjct 319 AAAATGAAGAAAACTGCTGAGG--ATTTCTTAGGCGAGCCAGTAACAGCAGCAGTAATTA 262 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 | || ||||| || ||||||||| |||| ||||| ||||||||||| || || | |||| Sbjct 261 CCGTACCAGCGTACTTTAATGATGCTCAGCGTCAGGCAACTAAAGACGCAGGCCGGATTG 202 Query 474807 CAGGTCTTA-ATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 | || |||| |||| ||| ||||| || || ||||| || || || || ||||| ||| Sbjct 201 CTGG-CTTAGATGTAAAACGGATTATCAACGAGCCAACTGCTGCGGCGCTGGCTTACGGT 143 Query 474866 CTTGATAAGAA 474876 | ||||| || Sbjct 142 ATGGATAAAAA 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3267468132038396