Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020486.1 Length=171211 Score E Sequences producing significant alignments: (Bits) Value seq8042 280 2e-70 seq9616 210 2e-49 seq15666 165 9e-36 seq10300 132 5e-26 seq849 84.2 2e-11 seq2991 82.4 8e-11 >seq8042 Length=962 Score = 280 bits (310), Expect = 2e-70 Identities = 625/921 (68%), Gaps = 29/921 (3%) Strand=Plus/Minus Query 162225 GGGACTACTTTCGTCACGAGTTGGTATACTCACGGACTTGCGAGTTCCTATCTTGAGGGT 162284 || || || || ||||| |||||| || || || | || || || || | || || Sbjct 962 GGCACAACATTTGTCACAAGTTGGCTAACACATGGTTTGGCAAGCTCATACTTAGAAGGA 903 Query 162285 GCAAACTTTCTTACTGCGGCAGTTTCTACTCCAGCAGACGCTATGGGTCATTCTCTTCTG 162344 |||||| | || || |||||| || ||||| | ||||| |||||||| || Sbjct 902 TGTAACTTTTTAACAGCAGCAGTTAGCACACCAGCTAATAGCATGGGACATTCTCTACTA 843 Query 162345 CTTCTATGGGGTCCTGAGTCTCAAGGGGACTTCATCCGCTGGTGCCAACTTGGGGGACTC 162404 || | ||||| || || | ||||| | || | | || |||| ||| ||| Sbjct 842 CTATTGTGGGGACCAGAAGCACAAGGTTATTTTACAAGATGAAC---ACTTATGGG-CTC 787 Query 162405 T----GGACTTTTGTGGCGCTCCACGGAGCCTTTGCACTTATAGGTTTCATGCTTC-GCC 162459 | |||| || | | | ||| | ||||||| ||||||| || || || | | Sbjct 786 TTTATGGACCTTCATTACTTTTCACTCAATCTTTGCAGTTATAGGCTTT-TGTTTAAGGC 728 Query 162460 AGTTTGAACTGGCACGACTTA-TCGGTATTCGTCCTTACAATGCTATTGCTTTCTCAGGT 162518 ||||||| | || | |||| || |||| ||||| ||||||||| | || ||| |||| Sbjct 727 AGTTTGAGATAGCCAG-CTTAGTCAGTATACGTCCGTACAATGCTCTAGCCTTCACAGGC 669 Query 162519 CCTAT--TGCTGTATTCGTTAGTGTTTTTCTTATCTATCCTTTGGGACAATCGTCCTGGT 162576 ||||| | || || | |||||| || || || ||||| || ||||| || |||| Sbjct 668 CCTATAATACTATACATATCAGTGTTCGTC--ATTTACCCTTTAGGTCAATCCTCTTGGT 611 Query 162577 TCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTCCTGCTCTTCCTCCAAGGGT 162636 |||| ||||| | || || ||||| |||||| | ||||| || ||||| ||||| | Sbjct 610 TCTTTGCACCTAGCTATGGAGTTGCAGCCATCTTCAGGTTCCTCCTATTCCTACAAGGCT 551 Query 162637 TCCATAACTGGACGCTAAATCCTTTTCACATGATGGGCGTAGCAGGTATCCTTGGTGGTG 162696 | || || ||||| ||||| || || || |||||||| ||||||| ||| | || | | Sbjct 550 TTCACAATTGGACTCTAAACCCATTCCATATGATGGGAATAGCAGGAATCTTGGGAGCAG 491 Query 162697 CATTGCTCTCTGCTATTCATGGAGTGACAGTTGAAAATACACTGTACGAAGATGGCGAAC 162756 | | | || ||||| ||||| | ||||| | || || | || ||||||| | Sbjct 490 CTCTTTTATCAGCTATACATGGTGCCACAGTAGTTAACACTATATATCAAGATGGT---C 434 Query 162757 AAGCAAACACT---TTTAAAGCATTTGACTCCA-CACAGGAGGAAGAAACGTATTCGATG 162812 |||| |||| || | | |||| ||||| | || || || || || || ||| Sbjct 433 AAGCTTACACAACCTTCAGATCATTCT-CTCCAACGCAACCTGAGGAGACTTACTCTATG 375 Query 162813 GTTACTGCGAACCGCTTCTGGTCACAGATTTTCGGTATTGCTTTTAGTAACAAGCGTTGG 162872 | || || || | |||||||| || | |||| | || ||| || ||| | ||| Sbjct 374 CTAACAGCTAATAGATTCTGGTCTCAAGTACTCGGAGTAGCATTTTCCAATAAGAGATGG 315 Query 162873 TTGCATTTCTTTATGCTCTTTGTTCCCGTCATGGGTCTCTGGACAAGTTCTATCGGTATT 162932 | || ||||| | || || || || || || | ||||| |||||| || || Sbjct 314 CTTCACTTCTTCCTACTATTAGTACCAGTAGCAGGAATGTGGACCTCTTCTATAGGAATA 255 Query 162933 ATTGGACTCGCTCTCAATCTTCGTGCTTACGACTTTGTATCTCAAGAAGTTCGTGCGGCA 162992 || ||||| || |||| ||| | || || |||||| ||||||| || || || ||| Sbjct 254 ATAGGACTAGCATTCAACCTTAGAGCATATGACTTTATATCTCAGGA-GTAAAGGCTGCA 196 Query 162993 GAAGACCCTGAGTTTGAGACGTTCTATACAAAGAACATTCTTCTGAATGAAGGACTTCGA 163052 || ||||| ||||||||||| |||||||| |||||||| || || |||||||| | || Sbjct 195 GAGGACCCAGAGTTTGAGACATTCTATACTAAGAACATACTACTTAATGAAGGTATCCGT 136 Query 163053 GCATGGTTAGCA--CCAGTGGACCAACCTCATGAGAACTTTGTGTTCCCTGAAGAGGTCT 163110 |||| | ||| ||| || ||||||||||||||||| |||||||| || || Sbjct 135 TTATGGATGGCAGTCCAA--GAACAACCTCATGAGAACTTCCAATTCCCTGAGGAAGTAC 78 Query 163111 TGCCAAGAGGCAACGCTCTAT 163131 | |||||||||||| | |||| Sbjct 77 TTCCAAGAGGCAACTCACTAT 57 >seq9616 Length=845 Score = 210 bits (232), Expect = 2e-49 Identities = 374/544 (69%), Gaps = 4/544 (1%) Strand=Plus/Plus Query 161317 GGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTACATG 161376 || ||||| |||| ||||| ||||| || || || ||| || ||||||| ||| Sbjct 8 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTATG 67 Query 161377 CTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAGCA 161436 | || ||||||||||| |||| |||| | ||||| || ||||| || | || |||||| Sbjct 68 TTAGTATTCCAAGCAGAACACAGCATTTTAATGCATCCATTCCACATATTAGGAGTAGCA 127 Query 161437 GGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGCTG 161496 | ||| || || || ||||| |||||||| ||||| || || |||| || || || || Sbjct 128 GCTGTTTTCGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTAACTTCATCTCTA 187 Query 161497 GTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGAA 161556 || || || | | | || | || | || || | ||||| || | || Sbjct 188 CTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATTCGGACAGTAGGAT 247 Query 161557 GAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACGCT 161616 ||||| || | ||| || || || || ||||| ||| | || || ||||| ||| | Sbjct 248 GAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTAATATTCCAGTACAGT 307 Query 161617 TCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCATC 161676 ||| |||||||| | | ||||||||||| || || ||||| || | || || Sbjct 308 AGCTTTAACAACTCAAGAAGCATACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTATA 367 Query 161677 TGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCAAC 161736 |||||||| | || || ||| || ||||| || ||| | |||||| | ||||||||| Sbjct 368 TGGTTCACCTCTCTAGGAGTATCTACAATGGCTTTTAACTTAAATGGTCTGAACTTCAAC 427 Query 161737 CAGTCTATCGTTGATAGTCAG--GGTAAAGTTATCAACACCTGGGCAGACGTTCTCAACC 161794 | || | || | | |||| ||| | | || ||||| ||||| ||| | || || Sbjct 428 GAATCACTTGT--AGACTCAGAAGGTCATCTAATTAACACATGGGCCGACATACTTAATA 485 Query 161795 GTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCCTCTTGACC 161854 | || | || || |||||||| ||||| ||| | ||||| ||||||||||| || || | Sbjct 486 GAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACAACTTCCCACTAGATC 545 Query 161855 TTGC 161858 | || Sbjct 546 TAGC 549 >seq15666 Length=534 Score = 165 bits (182), Expect = 9e-36 Identities = 359/533 (67%), Gaps = 7/533 (1%) Strand=Plus/Plus Query 161317 GGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCATCTCTGGTACGTTCAACTAC-AT 161375 || ||||| |||| ||||| ||||| || || || ||| || ||||||| || Sbjct 4 GGACAAGGAAGTTTCAGTGATGGTATGCCACTAGGTATTAGTGGAACCTTCAACTTTTAT 63 Query 161376 GCTTGTCTTCCAAGCAGAGCACAACATTCTCATGCACCCCTTCCATATGCTCGGCGTAGC 161435 | | || ||||||||||| ||||||||| | |||||||| ||||| || | || ||||| Sbjct 64 GTTAGTATTCCAAGCAGAACACAACATTTTAATGCACCCATTCCACATATTAGGAGTAGC 123 Query 161436 AGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACGGTTCGCTGGTTACCTCTTCGCT 161495 || ||| ||||| || ||||| |||||||| ||||| || || |||| || || || || Sbjct 124 AGCTGTTTTTGGAGGATCTCTATTCAGTGCTATGCATGGATCATTGGTCACTTCATCTCT 183 Query 161496 GGTTCGTGAAACCACCGAAAACGAGTCCCAGAACTATGGTTACAAGTTCGGTCAAGAAGA 161555 || || || | | | || | || | || || | | | || || || Sbjct 184 ACTTGCAGAGACACTTGGATCTAACTCACTCAATTCAGGCTATATATGTGAACAGGAGGA 243 Query 161556 AGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTGATTTTCCAATACGC 161615 ||||| || | ||| || || || || ||||| ||| | | || ||||| |||| Sbjct 244 TGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACCAATATTCCAGTACGG 303 Query 161616 TTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGGCCTGTTGTTGGCAT 161675 | ||| |||||||| | || ||||||||||| || || ||||| || | || || Sbjct 304 TAGCTTTAACAACTCAAGAAGCCTACACTTCTTCCTAGCAGCATGGCCAGTAATAGGTAT 363 Query 161676 CTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAATGGTTTCAACTTCAA 161735 |||||||| | || || | | || ||||| || ||| | |||| | | |||| Sbjct 364 ATGGTTCACCTCTCTAGGAGCATCTACGATGGCTTTTAACTTAAATG--TGAGCCCTCAA 421 Query 161736 CCAGTCTATCGTTGATAGTCAG--GGTAAAGTTATCAACACCTGGGCAGACGTTCTCAAC 161793 | || | || | | |||| | | | | || ||||| ||||| ||| | || || Sbjct 422 TGAATCACTTGT--AGACTCAGAAGATCATCTAATTAACACATGGGCCGACATACTTAAT 479 Query 161794 CGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACAACTTCCC 161846 | || | || || |||||||| ||||| ||| | ||||| ||| ||||||| Sbjct 480 AGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACGACTTCCC 532 >seq10300 Length=803 Score = 132 bits (146), Expect = 5e-26 Identities = 222/319 (70%), Gaps = 4/319 (1%) Strand=Plus/Minus Query 161542 TTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCCCACGGGTACTTCGGTCGTCTG 161601 ||||| || || || ||||| || | ||| || || || || ||||| ||| | || Sbjct 613 TTCGGACAGGAGGATGAGACATATAGCATATCAGCAGCACATGGATACTTTGGTAGACTA 554 Query 161602 ATTTTCCAATACGCTTCCTTCAACAACTCCCGCTCGCTGCACTTCTTCCTTGCTGCTTGG 161661 || |||||||||| | ||| |||||||| | || ||||||||||| || || ||| Sbjct 553 ATATTCCAATACGGTAGCTTTAACAACTCAAGAAGTCTACACTTCTTCCTAGCAGCATGG 494 Query 161662 CCTGTTGTTGGCATCTGGTTCACTGCACTGGGCGTAAGCACCATGGCATTCAACCTGAAT 161721 || || | || || |||||||| | || || ||| || ||| | || ||| | ||| Sbjct 493 CCAGTAATAGGTATATGGTTCACCTCTCTAGGAGTATCTACAATGACTTTTAACTTAAAT 434 Query 161722 GGTTTCAACTTCAACCAGTCTATCGTTGATAGTCAG--GGTAAAGTTATCAACACCTGGG 161779 || | |||||||| | || | || | | |||| ||| | | || ||||| |||| Sbjct 433 GGCCTGAACTTCAATGAATCACTTGT--AGACTCAGAAGGTCATCTAATTAACACATGGG 376 Query 161780 CAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGCAATGCTCACA 161839 | ||| | || || | || | || || |||||||| ||||| ||| | ||||| ||| Sbjct 375 CCGACATACTTAATAGAGCAGACCTAGGTATGGAAGTAATGCATGAGAGGAATGCACACG 316 Query 161840 ACTTCCCTCTTGACCTTGC 161858 ||||||| || || || || Sbjct 315 ACTTCCCACTAGATCTAGC 297 >seq849 Length=5026 Score = 84.2 bits (92), Expect = 2e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 157689 ACGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGA 157748 |||||||||||||||||||||||||||| | || |||| | |||||| |||||| | Sbjct 3509 ACGGGGTGTAGCGCAGCTTGGTAGCGCGTCTCGTTCGGGACGAGAAGGTCGTAGGTTCAA 3450 Query 157749 ATCCTGTCACCCCGACTTATC 157769 ||||| ||||||||| || || Sbjct 3449 ATCCTATCACCCCGATTTTTC 3429 >seq2991 Length=1910 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 157690 CGGGGTGTAGCGCAGCTTGGTAGCGCGGTTGCTTTGGGAGCAATAGGTCGCAGGTTCGAA 157749 |||| ||||||||||| ||||||||| ||||| ||||||| ||||| ||||||||| Sbjct 91 CGGGCTGTAGCGCAGCCTGGTAGCGCACCTGCTTCGGGAGCAGGGGGTCGGAGGTTCGAA 32 Query 157750 TCCTGTCACCCCGAC 157764 |||| ||| |||||| Sbjct 31 TCCTCTCAGCCCGAC 17 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547633699933320