Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020488.1 Length=38682 Score E Sequences producing significant alignments: (Bits) Value seq11540 127 5e-25 >seq11540 Length=733 Score = 127 bits (140), Expect = 5e-25 Identities = 213/308 (69%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 25784 ACAACAATCTCAGTAGTGTACTGATCTTGACCTTGCTGGTTCTGCCACTTGCGCGTGCGC 25843 || |||||||| || ||||| || || |||| | |||||||||||||| || || Sbjct 469 ACCACAATCTCGGTGGTGTATACGTCCTGCCCTTCTTTATTCTGCCACTTGCGGGTTTGC 410 Query 25844 AACTTGCCTTCAATGTAAAGCTTTGAGCCTTTGCGTGTGTACTCGCCGGCCACCTCTGCC 25903 | ||||| || || | ||| || ||||| || ||||| ||||||||| || ||| Sbjct 409 AGGCGACCTTCGATATACACCTTGGAACCTTTACGCAGGTACTGGCCGGCCACTTCCGCC 350 Query 25904 AACTTCCCGTATAACACAACACGGTGCCACTCTGTTTTTTCTACCGGCTGCCCTGTCTGC 25963 | ||| ||| | | |||||| |||||||| || ||| | |||| ||| || ||||| Sbjct 349 ACCTTGCCGAACAGCACAACCCGGTGCCATTCGGTTCTCGGTACCATCTGGCCAGTCTGG 290 Query 25964 TTGTCTTTGTACTGCTCACTGGTGGCAATGCTTAAATTTGCCACGGCGGTACCGTTAGGC 26023 || ||||| ||| ||| || | | | | ||| | || ||| | || || || Sbjct 289 CGATCCTTGTAACTTTCATCGGTAGCCAGGTTGAGATTCACAACCGCGTTGCCATTCGGG 230 Query 26024 ATATACCTAACTTCCGGGTCCTGGCCTAAGTTGCCGACAATGATTACCTTGTTAATTCCG 26083 |||| | ||||| |||||||| | || || | | |||||||||||||| || Sbjct 229 GTATAGCGGGTATCCGGATCCTGGCCCAGATTACCAATGAGAATTACCTTGTTAATGCCT 170 Query 26084 CGTGCCAT 26091 |||||||| Sbjct 169 CGTGCCAT 162 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 123636457139656