Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Prorocentrum_20minimum_20[genbank_20GCA_5F001652855.1_202016-05-26] 16,577 sequences; 29,349,011 total letters Query= NC_020489.1 Length=40489 Score E Sequences producing significant alignments: (Bits) Value seq1876 105 2e-18 >seq1876 Length=2695 Score = 105 bits (116), Expect = 2e-18 Identities = 172/245 (70%), Gaps = 2/245 (1%) Strand=Plus/Plus Query 19455 GCCCTTTGTGGTGGCGCCATCACGACGATGGCGGCGGCGCTGGCCGGGCGCCTGATGTGG 19514 || || | |||||| ||| | || ||| || | ||| | |||| || ||||||||| Sbjct 1486 GCGCTGTTTGGTGGGGCCGTGACCACGCTGATAGGGGCTTTTACCGGCCGGCTGATGTGG 1545 Query 19515 CATTCGACCGAGGTGCGGGCGCGGCGGC-GCCGGTTTTTCGGGCGTGAACTGCTGTGGGA 19573 |||||| |||||| | |||| | |||| ||||| || || || |||||||| Sbjct 1546 CATTCGGGCGAGGTAAAA-CTCGGCAACCGCCGTTTTTTTGGCAAGGAGCTCCTGTGGGA 1604 Query 19574 GCTGCCGGTGGCCGTGGGCATGGCGATCATCGGCGAGGCGGTGGCGGCTTATTTCGGGCT 19633 | || || || || ||||||||| | || || ||||||| ||| || | ||||| Sbjct 1605 AATCCCCGTCGCGGTCGGCATGGCGCTGATTGGGGAGGCGGCGGCACGCTACATTGGGCT 1664 Query 19634 GGGGCGGACGGTGACCACCGGCGTCGTCGCCTCGCTCGCCTACCTCGGCCCGCGCGGGGC 19693 | | | |||| |||| || | || || |||||||||| ||||||||||| ||||| Sbjct 1665 GTCACAGCCGGTCTCCACTGGGTTTGTGGCAACGCTCGCCTATCTCGGCCCGCGTGGGGC 1724 Query 19694 CGAGG 19698 |||| Sbjct 1725 GGAGG 1729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 129417718863374